RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 SETBP1Q9Y6X0 1596 aa2.92□□□□□ -1.94
RNU6-42P-201ENST00000384165 PTPRMP28827 1452 aa2.92□□□□□ -1.94
RNU6-42P-201ENST00000384165 SNAPC4Q5SXM2 1469 aa2.92□□□□□ -1.94
RNU6-42P-201ENST00000384165 YEATS2Q9ULM3 1422 aa2.92□□□□□ -1.94
RNU6-42P-201ENST00000384165 GAPVD1Q14C86 1478 aa2.91□□□□□ -1.94
RNU6-42P-201ENST00000384165 MRC2Q9UBG0 1479 aa2.91□□□□□ -1.94
RNU6-42P-201ENST00000384165 RXRBP28702 533 aa2.91□□□□□ -1.94
RNU6-42P-201ENST00000384165 ABCC10Q5T3U5 1492 aa2.9□□□□□ -1.94
RNU6-42P-201ENST00000384165 NUTM2BA6NNL0 878 aaPredicted RBP2.9□□□□□ -1.95
RNU6-42P-201ENST00000384165 NUTM2EB1AL46 878 aaPredicted RBP2.9□□□□□ -1.95
RNU6-42P-201ENST00000384165 HSPA6P17066 643 aa2.9□□□□□ -1.95
RNU6-42P-201ENST00000384165 NUTM2DQ5VT03 806 aaPredicted RBP2.9□□□□□ -1.95
RNU6-42P-201ENST00000384165 NUTM2AQ8IVF1 878 aaPredicted RBP2.9□□□□□ -1.95
RNU6-42P-201ENST00000384165 KIF13AQ9H1H9 1805 aa2.89□□□□□ -1.95
RNU6-42P-201ENST00000384165 UNC79Q9P2D8 2635 aa2.89□□□□□ -1.95
RNU6-42P-201ENST00000384165 AATKQ6ZMQ8 1374 aa2.88□□□□□ -1.95
RNU6-42P-201ENST00000384165 ZNF772Q68DY9 489 aaPredicted RBP2.88□□□□□ -1.95
RNU6-42P-201ENST00000384165 CCDC125Q86Z20 511 aa2.88□□□□□ -1.95
RNU6-42P-201ENST00000384165 ARID4BQ4LE39 1312 aaPredicted RBP2.88□□□□□ -1.95
RNU6-42P-201ENST00000384165 SETD1AO15047 1707 aaKnown RBP2.86□□□□□ -1.95
RNU6-42P-201ENST00000384165 SLC17A8Q8NDX2 589 aa2.86□□□□□ -1.95
RNU6-42P-201ENST00000384165 SNX27Q96L92 541 aa2.86□□□□□ -1.95
RNU6-42P-201ENST00000384165 PKD1L2Q7Z442 2459 aa2.85□□□□□ -1.95
RNU6-42P-201ENST00000384165 WDR62O43379 1518 aa2.85□□□□□ -1.95
RNU6-42P-201ENST00000384165 HRCP23327 699 aa2.85□□□□□ -1.95
RNU6-42P-201ENST00000384165 TSPOAP1O95153 1857 aa2.84□□□□□ -1.95
RNU6-42P-201ENST00000384165 PSDA5PKW4 1024 aaPredicted RBP2.83□□□□□ -1.96
RNU6-42P-201ENST00000384165 PPP1R1BQ9UD71 204 aaPredicted RBP2.83□□□□□ -1.96
RNU6-42P-201ENST00000384165 TNS2Q63HR2 1409 aa2.83□□□□□ -1.96
RNU6-42P-201ENST00000384165 LAMC3Q9Y6N6 1575 aa2.83□□□□□ -1.96
RNU6-42P-201ENST00000384165 KIF21AQ7Z4S6 1674 aa2.82□□□□□ -1.96
RNU6-42P-201ENST00000384165 APLP1P51693 650 aa2.82□□□□□ -1.96
RNU6-42P-201ENST00000384165 MEX3CQ5U5Q3 659 aaKnown RBP2.82□□□□□ -1.96
RNU6-42P-201ENST00000384165 DNAJC5GQ8N7S2 189 aa2.82□□□□□ -1.96
RNU6-42P-201ENST00000384165 DACH1Q9UI36 760 aa2.82□□□□□ -1.96
RNU6-42P-201ENST00000384165 ZNF335Q9H4Z2 1342 aaPredicted RBP2.82□□□□□ -1.96
RNU6-42P-201ENST00000384165 USP19O94966 1318 aa2.81□□□□□ -1.96
RNU6-42P-201ENST00000384165 NCAPD3P42695 1498 aa2.81□□□□□ -1.96
RNU6-42P-201ENST00000384165 CACNA1GO43497 2377 aa2.8□□□□□ -1.96
RNU6-42P-201ENST00000384165 LRP5O75197 1615 aa2.8□□□□□ -1.96
RNU6-42P-201ENST00000384165 BAZ1BQ9UIG0 1483 aaKnown RBP2.8□□□□□ -1.96
RNU6-42P-201ENST00000384165 ATAD2Q6PL18 1390 aa2.8□□□□□ -1.96
RNU6-42P-201ENST00000384165 FAM83GA6ND36 823 aa2.8□□□□□ -1.96
RNU6-42P-201ENST00000384165 CCDC180Q9P1Z9 1646 aa2.79□□□□□ -1.96
RNU6-42P-201ENST00000384165 COL17A1Q9UMD9 1497 aaPredicted RBP2.79□□□□□ -1.96
RNU6-42P-201ENST00000384165 PPEF1O14829 653 aaPredicted RBP2.79□□□□□ -1.96
RNU6-42P-201ENST00000384165 RGS19P49795 217 aa2.79□□□□□ -1.96
RNU6-42P-201ENST00000384165 SF3B2Q13435 895 aaKnown RBP2.79□□□□□ -1.96
RNU6-42P-201ENST00000384165 CCDC85CA6NKD9 419 aa2.78□□□□□ -1.96
RNU6-42P-201ENST00000384165 ZNF608Q9ULD9 1512 aaPredicted RBP2.78□□□□□ -1.97
RNU6-42P-201ENST00000384165 PTPRKQ15262 1439 aa2.77□□□□□ -1.97
RNU6-42P-201ENST00000384165 JMYQ8N9B5 988 aa2.77□□□□□ -1.97
RNU6-42P-201ENST00000384165 GCC1Q96CN9 775 aa2.77□□□□□ -1.97
RNU6-42P-201ENST00000384165 FAM122AQ96E09 287 aa2.77□□□□□ -1.97
RNU6-42P-201ENST00000384165 A0A0C4DFX4 3053 aa2.77□□□□□ -1.97
RNU6-42P-201ENST00000384165 DIP2BQ9P265 1576 aa2.76□□□□□ -1.97
RNU6-42P-201ENST00000384165 NGLY1Q96IV0 654 aa2.76□□□□□ -1.97
RNU6-42P-201ENST00000384165 RBM6P78332 1123 aaKnown RBP2.75□□□□□ -1.97
RNU6-42P-201ENST00000384165 PRPF38BQ5VTL8 546 aaKnown RBP2.75□□□□□ -1.97
RNU6-42P-201ENST00000384165 KLRG1Q96E93 195 aa2.75□□□□□ -1.97
RNU6-42P-201ENST00000384165 CFAP44Q96MT7 982 aa2.75□□□□□ -1.97
RNU6-42P-201ENST00000384165 CHD1O14646 1710 aa2.75□□□□□ -1.97
RNU6-42P-201ENST00000384165 CFAP43Q8NDM7 1665 aa2.74□□□□□ -1.97
RNU6-42P-201ENST00000384165 CDK12Q9NYV4 1490 aaPredicted RBP2.74□□□□□ -1.97
RNU6-42P-201ENST00000384165 R3HDM1Q15032 1099 aaKnown RBP2.74□□□□□ -1.97
RNU6-42P-201ENST00000384165 ABHD8Q96I13 439 aa2.74□□□□□ -1.97
RNU6-42P-201ENST00000384165 QTRT2Q9H974 415 aaKnown RBP2.74□□□□□ -1.97
RNU6-42P-201ENST00000384165 SCRIBQ14160 1630 aa2.74□□□□□ -1.97
RNU6-42P-201ENST00000384165 RAPGEF6Q8TEU7 1601 aa2.74□□□□□ -1.97
RNU6-42P-201ENST00000384165 CUL9Q8IWT3 2517 aa2.74□□□□□ -1.97
RNU6-42P-201ENST00000384165 CADPSQ9ULU8 1353 aa2.74□□□□□ -1.97
RNU6-42P-201ENST00000384165 IFT140Q96RY7 1462 aa2.73□□□□□ -1.97
RNU6-42P-201ENST00000384165 HSPA1AP0DMV8 641 aaKnown RBP2.73□□□□□ -1.97
RNU6-42P-201ENST00000384165 HSPA1BP0DMV9 641 aaKnown RBP2.73□□□□□ -1.97
RNU6-42P-201ENST00000384165 DEFB132Q7Z7B7 95 aa2.73□□□□□ -1.97
RNU6-42P-201ENST00000384165 GPBP1L1Q9HC44 474 aaPredicted RBP2.73□□□□□ -1.97
RNU6-42P-201ENST00000384165 SYNJ1O43426 1573 aa2.73□□□□□ -1.97
RNU6-42P-201ENST00000384165 CLASP1Q7Z460 1538 aa2.73□□□□□ -1.97
RNU6-42P-201ENST00000384165 ADAMTSL3P82987 1691 aa2.73□□□□□ -1.97
RNU6-42P-201ENST00000384165 NCKAP5LQ9HCH0 1330 aa2.72□□□□□ -1.97
RNU6-42P-201ENST00000384165 STRCQ7RTU9 1775 aa2.72□□□□□ -1.97
RNU6-42P-201ENST00000384165 ARID3CA6NKF2 412 aa2.72□□□□□ -1.97
RNU6-42P-201ENST00000384165 RGS12O14924 1447 aa2.72□□□□□ -1.97
RNU6-42P-201ENST00000384165 COL9A1P20849 921 aa2.72□□□□□ -1.97
RNU6-42P-201ENST00000384165 PLA2G5P39877 138 aa2.72□□□□□ -1.97
RNU6-42P-201ENST00000384165 MNX1P50219 401 aaPredicted RBP2.72□□□□□ -1.97
RNU6-42P-201ENST00000384165 MAPKBP1O60336 1514 aa2.72□□□□□ -1.97
RNU6-42P-201ENST00000384165 SMARCA4P51532 1647 aa2.71□□□□□ -1.97
RNU6-42P-201ENST00000384165 AQRO60306 1485 aaKnown RBP eCLIP2.71□□□□□ -1.974e-19■■■■□ 24.1
RNU6-42P-201ENST00000384165 TEX14Q8IWB6 1497 aa2.71□□□□□ -1.97
RNU6-42P-201ENST00000384165 HOXD11P31277 338 aaPredicted RBP2.71□□□□□ -1.98
RNU6-42P-201ENST00000384165 CEBPAP49715 358 aaPredicted RBP2.71□□□□□ -1.98
RNU6-42P-201ENST00000384165 SPON1Q9HCB6 807 aa2.71□□□□□ -1.98
RNU6-42P-201ENST00000384165 PRDM6Q9NQX0 595 aa2.71□□□□□ -1.98
RNU6-42P-201ENST00000384165 TAOK2Q9UL54 1235 aa2.71□□□□□ -1.98
RNU6-42P-201ENST00000384165 NINLQ9Y2I6 1382 aa2.71□□□□□ -1.98
RNU6-42P-201ENST00000384165 UHRF1BP1Q6BDS2 1440 aa2.7□□□□□ -1.98
RNU6-42P-201ENST00000384165 RAPGEF3O95398 923 aa2.7□□□□□ -1.98
RNU6-42P-201ENST00000384165 HABP4Q5JVS0 413 aaKnown RBP2.7□□□□□ -1.98
RNU6-42P-201ENST00000384165 ASXL2Q76L83 1435 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms