RNA–Protein interactions for RNA: ENST00000383917.1

RNU6-1279P-201, Transcript of RNA, U6 small nuclear 1279, pseudogene, humanhuman

BASIC

Gene RNU6-1279P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1279P-201ENST00000383917 HMGXB3Q12766 1538 aa6.77□□□□□ -1.33
RNU6-1279P-201ENST00000383917 SUPT5HO00267 1087 aaKnown RBP6.76□□□□□ -1.33
RNU6-1279P-201ENST00000383917 HMGB1P09429 215 aaKnown RBP6.75□□□□□ -1.33
RNU6-1279P-201ENST00000383917 ADRA2BP18089 450 aa6.75□□□□□ -1.33
RNU6-1279P-201ENST00000383917 FBLN2P98095 1184 aa6.75□□□□□ -1.33
RNU6-1279P-201ENST00000383917 KDM2AQ9Y2K7 1162 aa6.75□□□□□ -1.33
RNU6-1279P-201ENST00000383917 GAPVD1Q14C86 1478 aa6.74□□□□□ -1.33
RNU6-1279P-201ENST00000383917 FAM69CQ0P6D2 419 aa6.74□□□□□ -1.33
RNU6-1279P-201ENST00000383917 CADPSQ9ULU8 1353 aa6.72□□□□□ -1.33
RNU6-1279P-201ENST00000383917 CDK11AQ9UQ88 783 aaPredicted RBP6.71□□□□□ -1.34
RNU6-1279P-201ENST00000383917 SMARCA4P51532 1647 aa6.71□□□□□ -1.34
RNU6-1279P-201ENST00000383917 CEP164Q9UPV0 1460 aa6.71□□□□□ -1.34
RNU6-1279P-201ENST00000383917 CLASP1Q7Z460 1538 aa6.71□□□□□ -1.34
RNU6-1279P-201ENST00000383917 NBR1Q14596 966 aa6.69□□□□□ -1.34
RNU6-1279P-201ENST00000383917 ABCC10Q5T3U5 1492 aa6.67□□□□□ -1.34
RNU6-1279P-201ENST00000383917 CDK11BP21127 795 aaKnown RBP6.67□□□□□ -1.34
RNU6-1279P-201ENST00000383917 UBTFP17480 764 aaKnown RBP6.66□□□□□ -1.34
RNU6-1279P-201ENST00000383917 HRCP23327 699 aa6.66□□□□□ -1.34
RNU6-1279P-201ENST00000383917 URB2Q14146 1524 aaKnown RBP6.66□□□□□ -1.34
RNU6-1279P-201ENST00000383917 PLEKHG5O94827 1062 aa6.65□□□□□ -1.34
RNU6-1279P-201ENST00000383917 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.65□□□□□ -1.34
RNU6-1279P-201ENST00000383917 NPM3O75607 178 aaKnown RBP6.64□□□□□ -1.35
RNU6-1279P-201ENST00000383917 LOC105371045A0A1W2PR82 267 aa6.63□□□□□ -1.35
RNU6-1279P-201ENST00000383917 TOP2BQ02880 1626 aa6.63□□□□□ -1.35
RNU6-1279P-201ENST00000383917 IFT140Q96RY7 1462 aa6.63□□□□□ -1.35
RNU6-1279P-201ENST00000383917 BAZ1BQ9UIG0 1483 aaKnown RBP6.63□□□□□ -1.35
RNU6-1279P-201ENST00000383917 CCDC9Q9Y3X0 531 aaKnown RBP6.63□□□□□ -1.35
RNU6-1279P-201ENST00000383917 MED1Q15648 1581 aaPredicted RBP6.62□□□□□ -1.35
RNU6-1279P-201ENST00000383917 FANCD2Q9BXW9 1451 aa6.62□□□□□ -1.35
RNU6-1279P-201ENST00000383917 EIF4G3O43432 1585 aaKnown RBP6.61□□□□□ -1.35
RNU6-1279P-201ENST00000383917 PCF11O94913 1555 aaKnown RBP6.61□□□□□ -1.35
RNU6-1279P-201ENST00000383917 SNAPC4Q5SXM2 1469 aa6.61□□□□□ -1.35
RNU6-1279P-201ENST00000383917 PDIA4P13667 645 aaKnown RBP6.61□□□□□ -1.35
RNU6-1279P-201ENST00000383917 FOXD4L1Q9NU39 408 aa6.61□□□□□ -1.35
RNU6-1279P-201ENST00000383917 HSP90B1P14625 803 aaKnown RBP6.6□□□□□ -1.35
RNU6-1279P-201ENST00000383917 TSPOAP1O95153 1857 aa6.6□□□□□ -1.35
RNU6-1279P-201ENST00000383917 HSPA2P54652 639 aa6.59□□□□□ -1.35
RNU6-1279P-201ENST00000383917 DIP2BQ9P265 1576 aa6.59□□□□□ -1.35
RNU6-1279P-201ENST00000383917 CNKSR2Q8WXI2 1034 aa6.58□□□□□ -1.36
RNU6-1279P-201ENST00000383917 AQRO60306 1485 aaKnown RBP eCLIP6.58□□□□□ -1.36
RNU6-1279P-201ENST00000383917 PPP4R3CPQ6ZMV5 832 aa6.57□□□□□ -1.36
RNU6-1279P-201ENST00000383917 COL17A1Q9UMD9 1497 aaPredicted RBP6.56□□□□□ -1.36
RNU6-1279P-201ENST00000383917 PAXIP1Q6ZW49 1069 aaPredicted RBP6.56□□□□□ -1.36
RNU6-1279P-201ENST00000383917 ZBTB7CA1YPR0 619 aa6.55□□□□□ -1.36
RNU6-1279P-201ENST00000383917 BCL11AQ9H165 835 aa6.55□□□□□ -1.36
RNU6-1279P-201ENST00000383917 SYNJ1O43426 1573 aa6.55□□□□□ -1.36
RNU6-1279P-201ENST00000383917 PTPRMP28827 1452 aa6.54□□□□□ -1.36
RNU6-1279P-201ENST00000383917 BBXQ8WY36 941 aaPredicted RBP6.54□□□□□ -1.36
RNU6-1279P-201ENST00000383917 CFAP44Q96MT7 982 aa6.54□□□□□ -1.36
RNU6-1279P-201ENST00000383917 UBE2Q2Q8WVN8 375 aa6.53□□□□□ -1.36
RNU6-1279P-201ENST00000383917 BRD2P25440 801 aaKnown RBP6.52□□□□□ -1.37
RNU6-1279P-201ENST00000383917 CHMP4AQ9BY43 222 aa6.52□□□□□ -1.37
RNU6-1279P-201ENST00000383917 DCAF1Q9Y4B6 1507 aa6.51□□□□□ -1.37
RNU6-1279P-201ENST00000383917 CHMP7Q8WUX9 453 aaPredicted RBP6.51□□□□□ -1.37
RNU6-1279P-201ENST00000383917 RGS17Q9UGC6 210 aaPredicted RBP6.5□□□□□ -1.37
RNU6-1279P-201ENST00000383917 MAPKBP1O60336 1514 aa6.5□□□□□ -1.37
RNU6-1279P-201ENST00000383917 NEFLP07196 543 aa6.47□□□□□ -1.37
RNU6-1279P-201ENST00000383917 PUS7Q96PZ0 661 aaKnown RBP6.47□□□□□ -1.37
RNU6-1279P-201ENST00000383917 SLC34A2O95436 690 aa6.46□□□□□ -1.38
RNU6-1279P-201ENST00000383917 HSPA1LP34931 641 aa6.46□□□□□ -1.38
RNU6-1279P-201ENST00000383917 TAF7LQ5H9L4 462 aa6.46□□□□□ -1.38
RNU6-1279P-201ENST00000383917 SAMD1Q6SPF0 538 aaPredicted RBP6.46□□□□□ -1.38
RNU6-1279P-201ENST00000383917 NPM1P06748 294 aaKnown RBP eCLIP6.45□□□□□ -1.38
RNU6-1279P-201ENST00000383917 SENP3Q9H4L4 574 aaPredicted RBP6.45□□□□□ -1.38
RNU6-1279P-201ENST00000383917 LTBP4Q8N2S1 1624 aa6.45□□□□□ -1.38
RNU6-1279P-201ENST00000383917 IQSEC2Q5JU85 1478 aa6.45□□□□□ -1.38
RNU6-1279P-201ENST00000383917 TSHZ2Q9NRE2 1034 aa6.44□□□□□ -1.38
RNU6-1279P-201ENST00000383917 PPRC1Q5VV67 1664 aaKnown RBP6.44□□□□□ -1.38
RNU6-1279P-201ENST00000383917 UBAP1LF5GYI3 381 aa6.43□□□□□ -1.38
RNU6-1279P-201ENST00000383917 PDE4CQ08493 712 aa6.43□□□□□ -1.38
RNU6-1279P-201ENST00000383917 SPRYD3Q8NCJ5 442 aa6.43□□□□□ -1.38
RNU6-1279P-201ENST00000383917 ADAMTSL3P82987 1691 aa6.42□□□□□ -1.38
RNU6-1279P-201ENST00000383917 PTPRTO14522 1441 aa6.42□□□□□ -1.38
RNU6-1279P-201ENST00000383917 PEG3Q9GZU2 1588 aa6.41□□□□□ -1.38
RNU6-1279P-201ENST00000383917 IGSF3O75054 1194 aa6.41□□□□□ -1.38
RNU6-1279P-201ENST00000383917 UPF1Q92900 1129 aaKnown RBP eCLIP6.41□□□□□ -1.38
RNU6-1279P-201ENST00000383917 TARBP1Q13395 1621 aaKnown RBP6.4□□□□□ -1.38
RNU6-1279P-201ENST00000383917 PCDH10Q9P2E7 1040 aa6.4□□□□□ -1.38
RNU6-1279P-201ENST00000383917 DMRT2Q9Y5R5 561 aa6.4□□□□□ -1.38
RNU6-1279P-201ENST00000383917 CFTRP13569 1480 aa6.4□□□□□ -1.39
RNU6-1279P-201ENST00000383917 POTEAQ6S8J7 498 aa6.39□□□□□ -1.39
RNU6-1279P-201ENST00000383917 FAM9AQ8IZU1 332 aaPredicted RBP6.39□□□□□ -1.39
RNU6-1279P-201ENST00000383917 POLR3GLQ9BT43 218 aa6.39□□□□□ -1.39
RNU6-1279P-201ENST00000383917 RSPH6AQ9H0K4 717 aa6.39□□□□□ -1.39
RNU6-1279P-201ENST00000383917 CEP170Q5SW79 1584 aa6.39□□□□□ -1.39
RNU6-1279P-201ENST00000383917 KIF21BO75037 1637 aa6.37□□□□□ -1.39
RNU6-1279P-201ENST00000383917 TOPBP1Q92547 1522 aa6.37□□□□□ -1.39
RNU6-1279P-201ENST00000383917 ZCCHC6Q5VYS8 1495 aaKnown RBP6.37□□□□□ -1.39
RNU6-1279P-201ENST00000383917 YEATS2Q9ULM3 1422 aa6.37□□□□□ -1.39
RNU6-1279P-201ENST00000383917 ARID3AQ99856 593 aa6.37□□□□□ -1.39
RNU6-1279P-201ENST00000383917 ZMYND15Q9H091 742 aa6.37□□□□□ -1.39
RNU6-1279P-201ENST00000383917 SETD1AO15047 1707 aaKnown RBP6.36□□□□□ -1.39
RNU6-1279P-201ENST00000383917 MAGI1Q96QZ7 1491 aaPredicted RBP6.35□□□□□ -1.39
RNU6-1279P-201ENST00000383917 TDRD9Q8NDG6 1382 aaKnown RBP6.35□□□□□ -1.39
RNU6-1279P-201ENST00000383917 PPP6R1Q9UPN7 881 aa6.35□□□□□ -1.39
RNU6-1279P-201ENST00000383917 STRCQ7RTU9 1775 aa6.35□□□□□ -1.39
RNU6-1279P-201ENST00000383917 CEP350Q5VT06 3117 aa6.33□□□□□ -1.4
RNU6-1279P-201ENST00000383917 RBM33Q96EV2 1170 aaKnown RBP6.33□□□□□ -1.4
RNU6-1279P-201ENST00000383917 BCCIPQ9P287 314 aaKnown RBP eCLIP6.33□□□□□ -1.4
RNU6-1279P-201ENST00000383917 MROH2BQ7Z745 1585 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms