RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 DEKP35659 375 aaKnown RBP20.52■□□□□ 0.88
TUSC3-201ENST00000382020 RAB3GAP2Q9H2M9 1393 aa20.52■□□□□ 0.87
TUSC3-201ENST00000382020 PRKCSHP14314 528 aaPredicted RBP20.5■□□□□ 0.87
TUSC3-201ENST00000382020 B4GALNT3Q6L9W6 998 aa20.5■□□□□ 0.87
TUSC3-201ENST00000382020 MRS2Q9HD23 443 aa20.48■□□□□ 0.87
TUSC3-201ENST00000382020 TOP2AP11388 1531 aaKnown RBP20.45■□□□□ 0.86
TUSC3-201ENST00000382020 FOXD1Q16676 465 aa20.45■□□□□ 0.86
TUSC3-201ENST00000382020 SMARCA4P51532 1647 aa20.43■□□□□ 0.86
TUSC3-201ENST00000382020 BAZ1BQ9UIG0 1483 aaKnown RBP20.42■□□□□ 0.86
TUSC3-201ENST00000382020 EIF5BO60841 1220 aaKnown RBP20.42■□□□□ 0.86
TUSC3-201ENST00000382020 ZNF777Q9ULD5 760 aaPredicted RBP20.41■□□□□ 0.86
TUSC3-201ENST00000382020 CCDC136Q96JN2 1154 aa20.41■□□□□ 0.86
TUSC3-201ENST00000382020 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
TUSC3-201ENST00000382020 MSH5O43196 834 aa20.37■□□□□ 0.85
TUSC3-201ENST00000382020 UNC13AQ9UPW8 1703 aa20.37■□□□□ 0.85
TUSC3-201ENST00000382020 ANO8Q9HCE9 1232 aaPredicted RBP20.34■□□□□ 0.85
TUSC3-201ENST00000382020 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.34■□□□□ 0.85
TUSC3-201ENST00000382020 MTUS2Q5JR59 1369 aa20.33■□□□□ 0.84
TUSC3-201ENST00000382020 KIF27Q86VH2 1401 aa20.3■□□□□ 0.84
TUSC3-201ENST00000382020 BICRAQ9NZM4 1560 aa20.28■□□□□ 0.84
TUSC3-201ENST00000382020 KDM2AQ9Y2K7 1162 aa20.28■□□□□ 0.84
TUSC3-201ENST00000382020 PPP1R15AO75807 674 aaPredicted RBP20.27■□□□□ 0.84
TUSC3-201ENST00000382020 FBLN2P98095 1184 aa20.27■□□□□ 0.84
TUSC3-201ENST00000382020 SETD5Q9C0A6 1442 aa20.26■□□□□ 0.83
TUSC3-201ENST00000382020 ANP32AP39687 249 aaKnown RBP20.26■□□□□ 0.83
TUSC3-201ENST00000382020 EIF4G2P78344 907 aaKnown RBP eCLIP20.25■□□□□ 0.83
TUSC3-201ENST00000382020 KIF21BO75037 1637 aa20.24■□□□□ 0.83
TUSC3-201ENST00000382020 HSPA5P11021 654 aaKnown RBP20.22■□□□□ 0.83
TUSC3-201ENST00000382020 DAXXQ9UER7 740 aaPredicted RBP20.22■□□□□ 0.83
TUSC3-201ENST00000382020 SYNJ1O43426 1573 aa20.21■□□□□ 0.83
TUSC3-201ENST00000382020 CUX2O14529 1486 aa20.21■□□□□ 0.83
TUSC3-201ENST00000382020 NOP58Q9Y2X3 529 aaKnown RBP20.19■□□□□ 0.82
TUSC3-201ENST00000382020 ZBTB47Q9UFB7 747 aaPredicted RBP20.18■□□□□ 0.82
TUSC3-201ENST00000382020 MYT1LQ9UL68 1186 aa20.17■□□□□ 0.82
TUSC3-201ENST00000382020 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
TUSC3-201ENST00000382020 CARMIL1Q5VZK9 1371 aa20.16■□□□□ 0.82
TUSC3-201ENST00000382020 TMC1Q8TDI8 760 aa20.16■□□□□ 0.82
TUSC3-201ENST00000382020 SLC4A1APQ9BWU0 796 aaKnown RBP20.14■□□□□ 0.81
TUSC3-201ENST00000382020 LAS1LQ9Y4W2 734 aaKnown RBP20.14■□□□□ 0.81
TUSC3-201ENST00000382020 ATAD2BQ9ULI0 1458 aa20.13■□□□□ 0.81
TUSC3-201ENST00000382020 FHOD3Q2V2M9 1422 aa20.11■□□□□ 0.81
TUSC3-201ENST00000382020 CCDC184Q52MB2 194 aa20.11■□□□□ 0.81
TUSC3-201ENST00000382020 CCER2I3L3R5 266 aa20.11■□□□□ 0.81
TUSC3-201ENST00000382020 PPP4R2Q9NY27 417 aa20.1■□□□□ 0.81
TUSC3-201ENST00000382020 PHLDB1Q86UU1 1377 aa20.1■□□□□ 0.81
TUSC3-201ENST00000382020 ARXQ96QS3 562 aa20.05■□□□□ 0.8
TUSC3-201ENST00000382020 FANCIQ9NVI1 1328 aa20.04■□□□□ 0.8
TUSC3-201ENST00000382020 L3MBTL2Q969R5 705 aa20.03■□□□□ 0.8
TUSC3-201ENST00000382020 PAK3O75914 559 aaPredicted RBP20.02■□□□□ 0.8
TUSC3-201ENST00000382020 IL27Q8NEV9 243 aa20.02■□□□□ 0.8
TUSC3-201ENST00000382020 RGL3Q3MIN7 710 aa20.01■□□□□ 0.79
TUSC3-201ENST00000382020 WDR97A6NE52 1622 aa20■□□□□ 0.79
TUSC3-201ENST00000382020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.99■□□□□ 0.79
TUSC3-201ENST00000382020 NEFMP07197 916 aa19.97■□□□□ 0.79
TUSC3-201ENST00000382020 SENP3Q9H4L4 574 aaPredicted RBP19.96■□□□□ 0.79
TUSC3-201ENST00000382020 ARHGAP35Q9NRY4 1499 aa19.93■□□□□ 0.78
TUSC3-201ENST00000382020 TDRD9Q8NDG6 1382 aaKnown RBP19.92■□□□□ 0.78
TUSC3-201ENST00000382020 WASHC2AQ641Q2 1341 aa19.9■□□□□ 0.78
TUSC3-201ENST00000382020 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
TUSC3-201ENST00000382020 PEG3Q9GZU2 1588 aa19.88■□□□□ 0.77
TUSC3-201ENST00000382020 IGF1RP08069 1367 aa19.88■□□□□ 0.77
TUSC3-201ENST00000382020 RRBP1Q9P2E9 1410 aaKnown RBP19.87■□□□□ 0.77
TUSC3-201ENST00000382020 FHAD1B1AJZ9 1412 aa19.86■□□□□ 0.77
TUSC3-201ENST00000382020 PRKRIP1Q9H875 184 aaPredicted RBP19.86■□□□□ 0.77
TUSC3-201ENST00000382020 EIF4G1Q04637 1599 aaKnown RBP19.86■□□□□ 0.77
TUSC3-201ENST00000382020 CC2D1BQ5T0F9 858 aaKnown RBP19.85■□□□□ 0.77
TUSC3-201ENST00000382020 CARD11Q9BXL7 1154 aa19.85■□□□□ 0.77
TUSC3-201ENST00000382020 TIMELESSQ9UNS1 1208 aa19.84■□□□□ 0.77
TUSC3-201ENST00000382020 C11orf95C9JLR9 678 aaPredicted RBP19.8■□□□□ 0.76
TUSC3-201ENST00000382020 PRXQ9BXM0 1461 aa19.79■□□□□ 0.76
TUSC3-201ENST00000382020 PLIN1O60240 522 aa19.79■□□□□ 0.76
TUSC3-201ENST00000382020 RGS3P49796 1198 aa19.79■□□□□ 0.76
TUSC3-201ENST00000382020 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
TUSC3-201ENST00000382020 SLC4A3P48751 1232 aa19.79■□□□□ 0.76
TUSC3-201ENST00000382020 IPO9Q96P70 1041 aaKnown RBP19.79■□□□□ 0.76
TUSC3-201ENST00000382020 CCDC18Q5T9S5 1454 aa19.77■□□□□ 0.76
TUSC3-201ENST00000382020 CANXP27824 592 aaKnown RBP19.77■□□□□ 0.76
TUSC3-201ENST00000382020 LRRC9Q6ZRR7 1453 aa19.76■□□□□ 0.75
TUSC3-201ENST00000382020 ZNF644Q9H582 1327 aaPredicted RBP19.76■□□□□ 0.75
TUSC3-201ENST00000382020 DCAF11Q8TEB1 546 aa19.76■□□□□ 0.75
TUSC3-201ENST00000382020 CFDP1Q9UEE9 299 aaPredicted RBP19.76■□□□□ 0.75
TUSC3-201ENST00000382020 SKAP1Q86WV1 359 aa19.75■□□□□ 0.75
TUSC3-201ENST00000382020 PKD2Q13563 968 aa19.73■□□□□ 0.75
TUSC3-201ENST00000382020 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
TUSC3-201ENST00000382020 EXOC6Q8TAG9 804 aa19.71■□□□□ 0.75
TUSC3-201ENST00000382020 NBPF8Q3BBV2 869 aa19.7■□□□□ 0.74
TUSC3-201ENST00000382020 AKNAQ7Z591 1439 aa19.7■□□□□ 0.74
TUSC3-201ENST00000382020 CUX1P39880 1505 aa19.68■□□□□ 0.74
TUSC3-201ENST00000382020 NEUROD2Q15784 382 aa19.67■□□□□ 0.74
TUSC3-201ENST00000382020 FMN1Q68DA7 1419 aa19.67■□□□□ 0.74
TUSC3-201ENST00000382020 NUDCQ9Y266 331 aa19.67■□□□□ 0.74
TUSC3-201ENST00000382020 KIF7Q2M1P5 1343 aa19.67■□□□□ 0.74
TUSC3-201ENST00000382020 ERICH6BQ5W0A0 696 aa19.66■□□□□ 0.74
TUSC3-201ENST00000382020 MAPKBP1O60336 1514 aa19.66■□□□□ 0.74
TUSC3-201ENST00000382020 BRPF3Q9ULD4 1205 aa19.66■□□□□ 0.74
TUSC3-201ENST00000382020 HMGXB3Q12766 1538 aa19.65■□□□□ 0.74
TUSC3-201ENST00000382020 TSPY4P0CV99 314 aa19.65■□□□□ 0.74
TUSC3-201ENST00000382020 TSPY10P0CW01 314 aa19.65■□□□□ 0.74
TUSC3-201ENST00000382020 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.73
TUSC3-201ENST00000382020 FGD6Q6ZV73 1430 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms