RNA–Protein interactions for RNA: ENST00000381271.6

KLHL42-201, Transcript of kelch like family member 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL42, Length 6,703 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-201ENST00000381271 MYH16Q9H6N6 1097 aa21.13■□□□□ 0.97
KLHL42-201ENST00000381271 TAOK2Q9UL54 1235 aa21.1■□□□□ 0.97
KLHL42-201ENST00000381271 NCLP19338 710 aaKnown RBP21.02■□□□□ 0.96
KLHL42-201ENST00000381271 TSPY4P0CV99 314 aa20.97■□□□□ 0.95
KLHL42-201ENST00000381271 TSPY10P0CW01 314 aa20.97■□□□□ 0.95
KLHL42-201ENST00000381271 PPP1R15AO75807 674 aaPredicted RBP20.96■□□□□ 0.95
KLHL42-201ENST00000381271 HAP1P54257 671 aaPredicted RBP20.96■□□□□ 0.95
KLHL42-201ENST00000381271 PPM1GO15355 546 aaPredicted RBP20.95■□□□□ 0.94
KLHL42-201ENST00000381271 TRIM44Q96DX7 344 aaPredicted RBP20.94■□□□□ 0.94
KLHL42-201ENST00000381271 ARID4BQ4LE39 1312 aaPredicted RBP20.91■□□□□ 0.94
KLHL42-201ENST00000381271 KCNH8Q96L42 1107 aa20.9■□□□□ 0.94
KLHL42-201ENST00000381271 RGL3Q3MIN7 710 aa20.9■□□□□ 0.94
KLHL42-201ENST00000381271 RRP7BPQ9NSQ0 103 aa20.9■□□□□ 0.94
KLHL42-201ENST00000381271 MIER1Q8N108 512 aa20.9■□□□□ 0.94
KLHL42-201ENST00000381271 LAS1LQ9Y4W2 734 aaKnown RBP20.88■□□□□ 0.93
KLHL42-201ENST00000381271 BECN1Q14457 450 aa20.87■□□□□ 0.93
KLHL42-201ENST00000381271 PTMAP06454 111 aaKnown RBP20.87■□□□□ 0.93
KLHL42-201ENST00000381271 ZRSR1Q15695 479 aaKnown RBP20.85■□□□□ 0.93
KLHL42-201ENST00000381271 NEUROD2Q15784 382 aa20.83■□□□□ 0.93
KLHL42-201ENST00000381271 CHMP7Q8WUX9 453 aaPredicted RBP20.83■□□□□ 0.93
KLHL42-201ENST00000381271 DNTTIP2Q5QJE6 756 aaKnown RBP20.83■□□□□ 0.93
KLHL42-201ENST00000381271 GOLGA6L22H0YM25 854 aa20.82■□□□□ 0.92
KLHL42-201ENST00000381271 MTUS2Q5JR59 1369 aa20.81■□□□□ 0.92
KLHL42-201ENST00000381271 LMOD2Q6P5Q4 547 aa20.8■□□□□ 0.92
KLHL42-201ENST00000381271 NPHP1O15259 732 aa20.8■□□□□ 0.92
KLHL42-201ENST00000381271 EIF4G2P78344 907 aaKnown RBP eCLIP20.79■□□□□ 0.92
KLHL42-201ENST00000381271 DDRGK1Q96HY6 314 aa20.79■□□□□ 0.92
KLHL42-201ENST00000381271 PLCB2Q00722 1185 aa20.78■□□□□ 0.92
KLHL42-201ENST00000381271 SCRIBQ14160 1630 aa20.78■□□□□ 0.92
KLHL42-201ENST00000381271 FTSJ3Q8IY81 847 aaKnown RBP20.76■□□□□ 0.91
KLHL42-201ENST00000381271 TRHP20396 242 aaPredicted RBP20.75■□□□□ 0.91
KLHL42-201ENST00000381271 AMER1Q5JTC6 1135 aaPredicted RBP20.75■□□□□ 0.91
KLHL42-201ENST00000381271 CASC1Q6TDU7 716 aa20.73■□□□□ 0.91
KLHL42-201ENST00000381271 TNNT2P45379 298 aaPredicted RBP20.72■□□□□ 0.91
KLHL42-201ENST00000381271 RTN4Q9NQC3 1192 aaKnown RBP20.72■□□□□ 0.91
KLHL42-201ENST00000381271 CFAP53Q96M91 514 aa20.7■□□□□ 0.9
KLHL42-201ENST00000381271 NAP1L2Q9ULW6 460 aaPredicted RBP20.7■□□□□ 0.9
KLHL42-201ENST00000381271 SUPT16HQ9Y5B9 1047 aaKnown RBP20.67■□□□□ 0.9
KLHL42-201ENST00000381271 RGS3P49796 1198 aa20.67■□□□□ 0.9
KLHL42-201ENST00000381271 FRAT1Q92837 279 aaPredicted RBP20.67■□□□□ 0.9
KLHL42-201ENST00000381271 KNSTRNQ9Y448 316 aa20.67■□□□□ 0.9
KLHL42-201ENST00000381271 CLSTN1O94985 981 aa20.67■□□□□ 0.9
KLHL42-201ENST00000381271 OS9Q13438 667 aaPredicted RBP20.63■□□□□ 0.89
KLHL42-201ENST00000381271 NAP1L5Q96NT1 182 aaPredicted RBP20.63■□□□□ 0.89
KLHL42-201ENST00000381271 FGD1P98174 961 aa20.62■□□□□ 0.89
KLHL42-201ENST00000381271 ANP32EQ9BTT0 268 aa20.61■□□□□ 0.89
KLHL42-201ENST00000381271 MAPK8IP3Q9UPT6 1336 aa20.61■□□□□ 0.89
KLHL42-201ENST00000381271 SOX12O15370 315 aa20.57■□□□□ 0.88
KLHL42-201ENST00000381271 CC2D1BQ5T0F9 858 aaKnown RBP20.57■□□□□ 0.88
KLHL42-201ENST00000381271 CARD11Q9BXL7 1154 aa20.57■□□□□ 0.88
KLHL42-201ENST00000381271 KCNJ4P48050 445 aa20.57■□□□□ 0.88
KLHL42-201ENST00000381271 POGKQ9P215 609 aa20.56■□□□□ 0.88
KLHL42-201ENST00000381271 HSP90AB1P08238 724 aaKnown RBP20.56■□□□□ 0.88
KLHL42-201ENST00000381271 U2SURPO15042 1029 aaKnown RBP20.55■□□□□ 0.88
KLHL42-201ENST00000381271 GOLGA2Q08379 1002 aa20.54■□□□□ 0.88
KLHL42-201ENST00000381271 PLEKHD1A6NEE1 506 aa20.54■□□□□ 0.88
KLHL42-201ENST00000381271 SPRYD3Q8NCJ5 442 aa20.52■□□□□ 0.88
KLHL42-201ENST00000381271 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.5■□□□□ 0.87
KLHL42-201ENST00000381271 ISY1Q9ULR0 285 aaKnown RBP20.49■□□□□ 0.87
KLHL42-201ENST00000381271 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
KLHL42-201ENST00000381271 NUDCQ9Y266 331 aa20.48■□□□□ 0.87
KLHL42-201ENST00000381271 CDCA8Q53HL2 280 aa20.47■□□□□ 0.87
KLHL42-201ENST00000381271 PRM3Q9NNZ6 103 aa20.46■□□□□ 0.87
KLHL42-201ENST00000381271 ANO8Q9HCE9 1232 aaPredicted RBP20.46■□□□□ 0.87
KLHL42-201ENST00000381271 CLIP1P30622 1438 aa20.45■□□□□ 0.86
KLHL42-201ENST00000381271 GOLGA6L6A8MZA4 724 aa20.44■□□□□ 0.86
KLHL42-201ENST00000381271 DCAF1Q9Y4B6 1507 aa20.44■□□□□ 0.86
KLHL42-201ENST00000381271 CFDP1Q9UEE9 299 aaPredicted RBP20.44■□□□□ 0.86
KLHL42-201ENST00000381271 ERICH6BQ5W0A0 696 aa20.42■□□□□ 0.86
KLHL42-201ENST00000381271 GOLGA6L4A6NEF3 574 aa20.41■□□□□ 0.86
KLHL42-201ENST00000381271 ZCCHC6Q5VYS8 1495 aaKnown RBP20.41■□□□□ 0.86
KLHL42-201ENST00000381271 B4GALNT3Q6L9W6 998 aa20.41■□□□□ 0.86
KLHL42-201ENST00000381271 SAFB2Q14151 953 aaKnown RBP eCLIP20.4■□□□□ 0.86
KLHL42-201ENST00000381271 MLECQ14165 292 aa20.39■□□□□ 0.85
KLHL42-201ENST00000381271 SIN3AQ96ST3 1273 aa20.39■□□□□ 0.85
KLHL42-201ENST00000381271 APBB1O00213 710 aa20.38■□□□□ 0.85
KLHL42-201ENST00000381271 DRC7Q8IY82 874 aa20.37■□□□□ 0.85
KLHL42-201ENST00000381271 NOP58Q9Y2X3 529 aaKnown RBP20.36■□□□□ 0.85
KLHL42-201ENST00000381271 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
KLHL42-201ENST00000381271 PPP4R2Q9NY27 417 aa20.33■□□□□ 0.85
KLHL42-201ENST00000381271 PDE4CQ08493 712 aa20.32■□□□□ 0.84
KLHL42-201ENST00000381271 HSCBQ8IWL3 235 aa20.32■□□□□ 0.84
KLHL42-201ENST00000381271 NRDCO43847 1150 aa20.31■□□□□ 0.84
KLHL42-201ENST00000381271 SRPK2P78362 688 aaKnown RBP20.3■□□□□ 0.84
KLHL42-201ENST00000381271 ZNF330Q9Y3S2 320 aaPredicted RBP20.3■□□□□ 0.84
KLHL42-201ENST00000381271 GNL2Q13823 731 aaKnown RBP20.28■□□□□ 0.84
KLHL42-201ENST00000381271 ARID3AQ99856 593 aa20.28■□□□□ 0.84
KLHL42-201ENST00000381271 CHAF1AQ13111 956 aaPredicted RBP20.26■□□□□ 0.83
KLHL42-201ENST00000381271 DCAF11Q8TEB1 546 aa20.26■□□□□ 0.83
KLHL42-201ENST00000381271 CHMP4BQ9H444 224 aaKnown RBP20.26■□□□□ 0.83
KLHL42-201ENST00000381271 MSNP26038 577 aaKnown RBP20.25■□□□□ 0.83
KLHL42-201ENST00000381271 STK26Q9P289 416 aa20.24■□□□□ 0.83
KLHL42-201ENST00000381271 FBXO3Q9UK99 471 aa20.24■□□□□ 0.83
KLHL42-201ENST00000381271 MS4A1P11836 297 aa20.23■□□□□ 0.83
KLHL42-201ENST00000381271 PNNQ9H307 717 aaKnown RBP20.23■□□□□ 0.83
KLHL42-201ENST00000381271 MCCP23508 829 aa20.23■□□□□ 0.83
KLHL42-201ENST00000381271 RTF1Q92541 710 aaKnown RBP20.21■□□□□ 0.83
KLHL42-201ENST00000381271 PAK3O75914 559 aaPredicted RBP20.21■□□□□ 0.83
KLHL42-201ENST00000381271 MORC1Q86VD1 984 aa20.21■□□□□ 0.83
KLHL42-201ENST00000381271 TMF1P82094 1093 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms