RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 P3H3Q8IVL6 736 aa10.13□□□□□ -0.79
TRIM6-202ENST00000380097 EIF5BO60841 1220 aaKnown RBP10.13□□□□□ -0.79
TRIM6-202ENST00000380097 CADPSQ9ULU8 1353 aa10.12□□□□□ -0.79
TRIM6-202ENST00000380097 SALL2Q9Y467 1007 aaPredicted RBP10.12□□□□□ -0.79
TRIM6-202ENST00000380097 ERICH6BQ5W0A0 696 aa10.11□□□□□ -0.79
TRIM6-202ENST00000380097 VPS8Q8N3P4 1428 aa10.1□□□□□ -0.79
TRIM6-202ENST00000380097 NOP58Q9Y2X3 529 aaKnown RBP10.1□□□□□ -0.79
TRIM6-202ENST00000380097 CCER2I3L3R5 266 aa10.1□□□□□ -0.79
TRIM6-202ENST00000380097 SLC24A1O60721 1099 aa10.09□□□□□ -0.79
TRIM6-202ENST00000380097 HNRNPUQ00839 825 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRIM6-202ENST00000380097 FBLN2P98095 1184 aa10.08□□□□□ -0.8
TRIM6-202ENST00000380097 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
TRIM6-202ENST00000380097 HIRIP3Q9BW71 556 aaPredicted RBP10.07□□□□□ -0.8
TRIM6-202ENST00000380097 RTN4Q9NQC3 1192 aaKnown RBP10.06□□□□□ -0.8
TRIM6-202ENST00000380097 UBE2Q2Q8WVN8 375 aa10.05□□□□□ -0.8
TRIM6-202ENST00000380097 PPP4R2Q9NY27 417 aa10.05□□□□□ -0.8
TRIM6-202ENST00000380097 CEP164Q9UPV0 1460 aa10.05□□□□□ -0.8
TRIM6-202ENST00000380097 ANP32AP39687 249 aaKnown RBP10.03□□□□□ -0.8
TRIM6-202ENST00000380097 SYNJ1O43426 1573 aa10.03□□□□□ -0.8
TRIM6-202ENST00000380097 ARID3CA6NKF2 412 aa10.03□□□□□ -0.8
TRIM6-202ENST00000380097 TDRD9Q8NDG6 1382 aaKnown RBP10.02□□□□□ -0.81
TRIM6-202ENST00000380097 FANCD2Q9BXW9 1451 aa10.02□□□□□ -0.81
TRIM6-202ENST00000380097 PPP1R15AO75807 674 aaPredicted RBP10.02□□□□□ -0.81
TRIM6-202ENST00000380097 CFTRP13569 1480 aa10.01□□□□□ -0.81
TRIM6-202ENST00000380097 ZBTB47Q9UFB7 747 aaPredicted RBP10.01□□□□□ -0.81
TRIM6-202ENST00000380097 B4GALNT3Q6L9W6 998 aa10.01□□□□□ -0.81
TRIM6-202ENST00000380097 WDR97A6NE52 1622 aa10□□□□□ -0.81
TRIM6-202ENST00000380097 CUX2O14529 1486 aa9.99□□□□□ -0.81
TRIM6-202ENST00000380097 RAD54L2Q9Y4B4 1467 aa9.99□□□□□ -0.81
TRIM6-202ENST00000380097 PAK3O75914 559 aaPredicted RBP9.99□□□□□ -0.81
TRIM6-202ENST00000380097 IL27Q8NEV9 243 aa9.99□□□□□ -0.81
TRIM6-202ENST00000380097 SIN3AQ96ST3 1273 aa9.99□□□□□ -0.81
TRIM6-202ENST00000380097 KANK4Q5T7N3 995 aaPredicted RBP9.98□□□□□ -0.81
TRIM6-202ENST00000380097 ERCC6Q03468 1493 aa9.97□□□□□ -0.81
TRIM6-202ENST00000380097 BIVM-ERCC5R4GMW8 1640 aa9.97□□□□□ -0.81
TRIM6-202ENST00000380097 PKNOX2Q96KN3 472 aa9.95□□□□□ -0.82
TRIM6-202ENST00000380097 CUX1P39880 1505 aa9.95□□□□□ -0.82
TRIM6-202ENST00000380097 CCNB3Q8WWL7 1395 aa9.95□□□□□ -0.82
TRIM6-202ENST00000380097 IPO9Q96P70 1041 aaKnown RBP9.94□□□□□ -0.82
TRIM6-202ENST00000380097 RAB3GAP2Q9H2M9 1393 aa9.94□□□□□ -0.82
TRIM6-202ENST00000380097 RAPGEF2Q9Y4G8 1499 aa9.93□□□□□ -0.82
TRIM6-202ENST00000380097 PDS5BQ9NTI5 1447 aa9.93□□□□□ -0.82
TRIM6-202ENST00000380097 KIF27Q86VH2 1401 aa9.93□□□□□ -0.82
TRIM6-202ENST00000380097 FGD5Q6ZNL6 1462 aa9.93□□□□□ -0.82
TRIM6-202ENST00000380097 PLEKHG5O94827 1062 aa9.92□□□□□ -0.82
TRIM6-202ENST00000380097 TIMELESSQ9UNS1 1208 aa9.91□□□□□ -0.82
TRIM6-202ENST00000380097 KIF21BO75037 1637 aa9.91□□□□□ -0.82
TRIM6-202ENST00000380097 FAM50AQ14320 339 aaKnown RBP9.9□□□□□ -0.82
TRIM6-202ENST00000380097 NPM2Q86SE8 214 aaKnown RBP9.89□□□□□ -0.83
TRIM6-202ENST00000380097 NEFMP07197 916 aa9.89□□□□□ -0.83
TRIM6-202ENST00000380097 FAM9BQ8IZU0 186 aa9.89□□□□□ -0.83
TRIM6-202ENST00000380097 RRBP1Q9P2E9 1410 aaKnown RBP9.89□□□□□ -0.83
TRIM6-202ENST00000380097 CARMIL1Q5VZK9 1371 aa9.88□□□□□ -0.83
TRIM6-202ENST00000380097 TONSLQ96HA7 1378 aa9.88□□□□□ -0.83
TRIM6-202ENST00000380097 PODXL2Q9NZ53 605 aa9.87□□□□□ -0.83
TRIM6-202ENST00000380097 LAS1LQ9Y4W2 734 aaKnown RBP9.87□□□□□ -0.83
TRIM6-202ENST00000380097 SETD5Q9C0A6 1442 aa9.87□□□□□ -0.83
TRIM6-202ENST00000380097 AQRO60306 1485 aaKnown RBP eCLIP9.86□□□□□ -0.839e-8■■□□□ 11.9
TRIM6-202ENST00000380097 IGF1RP08069 1367 aa9.86□□□□□ -0.83
TRIM6-202ENST00000380097 CHMP7Q8WUX9 453 aaPredicted RBP9.85□□□□□ -0.83
TRIM6-202ENST00000380097 TOPBP1Q92547 1522 aa9.84□□□□□ -0.83
TRIM6-202ENST00000380097 TOP2BQ02880 1626 aa9.84□□□□□ -0.83
TRIM6-202ENST00000380097 MRS2Q9HD23 443 aa9.84□□□□□ -0.83
TRIM6-202ENST00000380097 USP35Q9P2H5 1018 aa9.84□□□□□ -0.83
TRIM6-202ENST00000380097 POLA1P09884 1462 aaPredicted RBP9.83□□□□□ -0.84
TRIM6-202ENST00000380097 URB2Q14146 1524 aaKnown RBP9.83□□□□□ -0.84
TRIM6-202ENST00000380097 MAPKBP1O60336 1514 aa9.83□□□□□ -0.84
TRIM6-202ENST00000380097 PPM1GO15355 546 aaPredicted RBP9.82□□□□□ -0.84
TRIM6-202ENST00000380097 DAXXQ9UER7 740 aaPredicted RBP9.81□□□□□ -0.84
TRIM6-202ENST00000380097 LAMC3Q9Y6N6 1575 aa9.81□□□□□ -0.84
TRIM6-202ENST00000380097 BRPF3Q9ULD4 1205 aa9.78□□□□□ -0.84
TRIM6-202ENST00000380097 WASHC2AQ641Q2 1341 aa9.78□□□□□ -0.84
TRIM6-202ENST00000380097 ZBED9Q6R2W3 1325 aa9.78□□□□□ -0.84
TRIM6-202ENST00000380097 ARAP1Q96P48 1450 aa9.77□□□□□ -0.84
TRIM6-202ENST00000380097 CNGB1Q14028 1251 aaPredicted RBP9.77□□□□□ -0.85
TRIM6-202ENST00000380097 C11orf95C9JLR9 678 aaPredicted RBP9.76□□□□□ -0.85
TRIM6-202ENST00000380097 GLIPR1L2Q4G1C9 344 aa9.76□□□□□ -0.85
TRIM6-202ENST00000380097 ZNF608Q9ULD9 1512 aaPredicted RBP9.76□□□□□ -0.85
TRIM6-202ENST00000380097 GSE1Q14687 1217 aa9.75□□□□□ -0.85
TRIM6-202ENST00000380097 CCDC184Q52MB2 194 aa9.75□□□□□ -0.85
TRIM6-202ENST00000380097 GAPVD1Q14C86 1478 aa9.74□□□□□ -0.85
TRIM6-202ENST00000380097 KIF21AQ7Z4S6 1674 aa9.74□□□□□ -0.85
TRIM6-202ENST00000380097 EIF4G2P78344 907 aaKnown RBP eCLIP9.73□□□□□ -0.85
TRIM6-202ENST00000380097 RSPH6AQ9H0K4 717 aa9.73□□□□□ -0.85
TRIM6-202ENST00000380097 HSPA5P11021 654 aaKnown RBP9.73□□□□□ -0.85
TRIM6-202ENST00000380097 DNMBPQ6XZF7 1577 aa9.73□□□□□ -0.85
TRIM6-202ENST00000380097 CHIC2Q9UKJ5 165 aa9.73□□□□□ -0.85
TRIM6-202ENST00000380097 WASHC2CQ9Y4E1 1318 aa9.73□□□□□ -0.85
TRIM6-202ENST00000380097 PRKRIP1Q9H875 184 aaPredicted RBP9.72□□□□□ -0.85
TRIM6-202ENST00000380097 FHOD3Q2V2M9 1422 aa9.72□□□□□ -0.85
TRIM6-202ENST00000380097 MRC2Q9UBG0 1479 aa9.72□□□□□ -0.85
TRIM6-202ENST00000380097 PRXQ9BXM0 1461 aa9.71□□□□□ -0.85
TRIM6-202ENST00000380097 TCERG1O14776 1098 aaKnown RBP9.71□□□□□ -0.86
TRIM6-202ENST00000380097 DDRGK1Q96HY6 314 aa9.71□□□□□ -0.86
TRIM6-202ENST00000380097 NUDCQ9Y266 331 aa9.71□□□□□ -0.86
TRIM6-202ENST00000380097 PDE4AP27815 886 aa9.7□□□□□ -0.86
TRIM6-202ENST00000380097 AKNAQ7Z591 1439 aa9.7□□□□□ -0.86
TRIM6-202ENST00000380097 SENP3-EIF4A1A0A087X0R7 540 aa9.69□□□□□ -0.86
TRIM6-202ENST00000380097 VSIG10Q8N0Z9 540 aa9.69□□□□□ -0.86
TRIM6-202ENST00000380097 POLR3GLQ9BT43 218 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms