RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 SENP3-EIF4A1A0A087X0R7 540 aa22.74■■□□□ 1.23
BRF1-203ENST00000379937 FOXD1Q16676 465 aa22.73■■□□□ 1.23
BRF1-203ENST00000379937 ARHGAP35Q9NRY4 1499 aa22.73■■□□□ 1.23
BRF1-203ENST00000379937 KCNH8Q96L42 1107 aa22.72■■□□□ 1.23
BRF1-203ENST00000379937 ACIN1Q9UKV3 1341 aaKnown RBP22.69■■□□□ 1.22
BRF1-203ENST00000379937 POLR3GLQ9BT43 218 aa22.68■■□□□ 1.22
BRF1-203ENST00000379937 DDX10Q13206 875 aaKnown RBP22.68■■□□□ 1.22
BRF1-203ENST00000379937 AQRO60306 1485 aaKnown RBP eCLIP22.67■■□□□ 1.228e-7■■■■■ 27.9
BRF1-203ENST00000379937 CCNB3Q8WWL7 1395 aa22.67■■□□□ 1.22
BRF1-203ENST00000379937 CENPBP07199 599 aaPredicted RBP22.66■■□□□ 1.22
BRF1-203ENST00000379937 HMGXB3Q12766 1538 aa22.65■■□□□ 1.22
BRF1-203ENST00000379937 PHLDB1Q86UU1 1377 aa22.63■■□□□ 1.21
BRF1-203ENST00000379937 MTUS2Q5JR59 1369 aa22.61■■□□□ 1.21
BRF1-203ENST00000379937 ZNF326Q5BKZ1 582 aaKnown RBP22.61■■□□□ 1.21
BRF1-203ENST00000379937 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
BRF1-203ENST00000379937 RAB3GAP2Q9H2M9 1393 aa22.59■■□□□ 1.21
BRF1-203ENST00000379937 DHX57Q6P158 1386 aaKnown RBP22.58■■□□□ 1.21
BRF1-203ENST00000379937 PDS5BQ9NTI5 1447 aa22.56■■□□□ 1.2
BRF1-203ENST00000379937 CHMP7Q8WUX9 453 aaPredicted RBP22.55■■□□□ 1.2
BRF1-203ENST00000379937 BCANQ96GW7 911 aa22.54■■□□□ 1.2
BRF1-203ENST00000379937 TOPBP1Q92547 1522 aa22.52■■□□□ 1.2
BRF1-203ENST00000379937 ZNF644Q9H582 1327 aaPredicted RBP22.48■■□□□ 1.19
BRF1-203ENST00000379937 URB2Q14146 1524 aaKnown RBP22.45■■□□□ 1.19
BRF1-203ENST00000379937 BIVM-ERCC5R4GMW8 1640 aa22.44■■□□□ 1.18
BRF1-203ENST00000379937 ERCC6Q03468 1493 aa22.4■■□□□ 1.18
BRF1-203ENST00000379937 GAPVD1Q14C86 1478 aa22.38■■□□□ 1.17
BRF1-203ENST00000379937 SENP3Q9H4L4 574 aaPredicted RBP22.38■■□□□ 1.17
BRF1-203ENST00000379937 ZNF608Q9ULD9 1512 aaPredicted RBP22.34■■□□□ 1.17
BRF1-203ENST00000379937 ERICH3Q5RHP9 1530 aa22.33■■□□□ 1.16
BRF1-203ENST00000379937 LRRC9Q6ZRR7 1453 aa22.28■■□□□ 1.16
BRF1-203ENST00000379937 SETD5Q9C0A6 1442 aa22.27■■□□□ 1.16
BRF1-203ENST00000379937 MYT1LQ9UL68 1186 aa22.25■■□□□ 1.15
BRF1-203ENST00000379937 FHAD1B1AJZ9 1412 aa22.24■■□□□ 1.15
BRF1-203ENST00000379937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.23■■□□□ 1.154e-6■■□□□ 14.4
BRF1-203ENST00000379937 TONSLQ96HA7 1378 aa22.23■■□□□ 1.15
BRF1-203ENST00000379937 KDM2AQ9Y2K7 1162 aa22.23■■□□□ 1.15
BRF1-203ENST00000379937 PCF11O94913 1555 aaKnown RBP22.21■■□□□ 1.15
BRF1-203ENST00000379937 IRX6P78412 446 aaPredicted RBP22.18■■□□□ 1.14
BRF1-203ENST00000379937 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
BRF1-203ENST00000379937 RRBP1Q9P2E9 1410 aaKnown RBP22.17■■□□□ 1.14
BRF1-203ENST00000379937 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
BRF1-203ENST00000379937 SLC4A1APQ9BWU0 796 aaKnown RBP22.15■■□□□ 1.14
BRF1-203ENST00000379937 CFDP1Q9UEE9 299 aaPredicted RBP22.15■■□□□ 1.14
BRF1-203ENST00000379937 PTPRKQ15262 1439 aa22.15■■□□□ 1.14
BRF1-203ENST00000379937 CDK13Q14004 1512 aaKnown RBP22.13■■□□□ 1.13
BRF1-203ENST00000379937 TIAM1Q13009 1591 aa22.13■■□□□ 1.13
BRF1-203ENST00000379937 JPH4Q96JJ6 628 aa22.12■■□□□ 1.13
BRF1-203ENST00000379937 RGL3Q3MIN7 710 aa22.09■■□□□ 1.13
BRF1-203ENST00000379937 KIF21AQ7Z4S6 1674 aa22.08■■□□□ 1.12
BRF1-203ENST00000379937 HNRNPMP52272 730 aaKnown RBP eCLIP22.07■■□□□ 1.122e-6■■■■■ 28
BRF1-203ENST00000379937 FMN1Q68DA7 1419 aa22.07■■□□□ 1.12
BRF1-203ENST00000379937 PPP1R15AO75807 674 aaPredicted RBP22.06■■□□□ 1.12
BRF1-203ENST00000379937 FGD6Q6ZV73 1430 aa22.05■■□□□ 1.12
BRF1-203ENST00000379937 NCOA2Q15596 1464 aa22.03■■□□□ 1.12
BRF1-203ENST00000379937 FAM9BQ8IZU0 186 aa22.02■■□□□ 1.12
BRF1-203ENST00000379937 L3MBTL2Q969R5 705 aa22.02■■□□□ 1.12
BRF1-203ENST00000379937 MPHOSPH9Q99550 1183 aa22.02■■□□□ 1.12
BRF1-203ENST00000379937 ANP32CO43423 234 aa22.01■■□□□ 1.11
BRF1-203ENST00000379937 SALL2Q9Y467 1007 aaPredicted RBP22.01■■□□□ 1.11
BRF1-203ENST00000379937 CASKIN1Q8WXD9 1431 aa22■■□□□ 1.11
BRF1-203ENST00000379937 WDR97A6NE52 1622 aa21.99■■□□□ 1.11
BRF1-203ENST00000379937 SNAPC4Q5SXM2 1469 aa21.98■■□□□ 1.11
BRF1-203ENST00000379937 CDK11AQ9UQ88 783 aaPredicted RBP21.98■■□□□ 1.11
BRF1-203ENST00000379937 PRG4Q92954 1404 aaPredicted RBP21.98■■□□□ 1.11
BRF1-203ENST00000379937 PLEKHD1A6NEE1 506 aa21.97■■□□□ 1.11
BRF1-203ENST00000379937 HSPA5P11021 654 aaKnown RBP21.96■■□□□ 1.11
BRF1-203ENST00000379937 FKBP8Q14318 412 aa21.96■■□□□ 1.11
BRF1-203ENST00000379937 PRDM2Q13029 1718 aa21.94■■□□□ 1.1
BRF1-203ENST00000379937 CCDC18Q5T9S5 1454 aa21.94■■□□□ 1.1
BRF1-203ENST00000379937 PLB1Q6P1J6 1458 aa21.93■■□□□ 1.1
BRF1-203ENST00000379937 HNRNPUQ00839 825 aaKnown RBP eCLIP21.93■■□□□ 1.1
BRF1-203ENST00000379937 MAPKBP1O60336 1514 aa21.92■■□□□ 1.1
BRF1-203ENST00000379937 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
BRF1-203ENST00000379937 PKD2Q13563 968 aa21.9■■□□□ 1.1
BRF1-203ENST00000379937 CCDC184Q52MB2 194 aa21.89■■□□□ 1.09
BRF1-203ENST00000379937 MRC2Q9UBG0 1479 aa21.88■■□□□ 1.09
BRF1-203ENST00000379937 MYOM3Q5VTT5 1437 aa21.87■■□□□ 1.09
BRF1-203ENST00000379937 CLSPNQ9HAW4 1339 aa21.87■■□□□ 1.09
BRF1-203ENST00000379937 C11orf95C9JLR9 678 aaPredicted RBP21.86■■□□□ 1.09
BRF1-203ENST00000379937 FYCO1Q9BQS8 1478 aa21.85■■□□□ 1.09
BRF1-203ENST00000379937 MAGI3Q5TCQ9 1506 aa21.85■■□□□ 1.09
BRF1-203ENST00000379937 GRIN2BQ13224 1484 aa21.84■■□□□ 1.09
BRF1-203ENST00000379937 NBPF8Q3BBV2 869 aa21.84■■□□□ 1.09
BRF1-203ENST00000379937 TSPY4P0CV99 314 aa21.83■■□□□ 1.09
BRF1-203ENST00000379937 TSPY10P0CW01 314 aa21.83■■□□□ 1.09
BRF1-203ENST00000379937 NAIPQ13075 1403 aa21.81■■□□□ 1.08
BRF1-203ENST00000379937 THOC2Q8NI27 1593 aaKnown RBP21.8■■□□□ 1.08
BRF1-203ENST00000379937 SUPT16HQ9Y5B9 1047 aaKnown RBP21.79■■□□□ 1.08
BRF1-203ENST00000379937 EIF4G2P78344 907 aaKnown RBP eCLIP21.78■■□□□ 1.081e-6■■■■■ 36.9
BRF1-203ENST00000379937 EPRSP07814 1512 aaKnown RBP21.78■■□□□ 1.08
BRF1-203ENST00000379937 DCAF11Q8TEB1 546 aa21.78■■□□□ 1.08
BRF1-203ENST00000379937 PELP1Q8IZL8 1130 aaKnown RBP21.76■■□□□ 1.07
BRF1-203ENST00000379937 MRS2Q9HD23 443 aa21.72■■□□□ 1.07
BRF1-203ENST00000379937 WASHC2AQ641Q2 1341 aa21.71■■□□□ 1.07
BRF1-203ENST00000379937 NUP155O75694 1391 aa21.7■■□□□ 1.07
BRF1-203ENST00000379937 IQGAP2Q13576 1575 aa21.69■■□□□ 1.06
BRF1-203ENST00000379937 CHGAP10645 457 aaKnown RBP21.69■■□□□ 1.06
BRF1-203ENST00000379937 NEFLP07196 543 aa21.68■■□□□ 1.06
BRF1-203ENST00000379937 TARBP1Q13395 1621 aaKnown RBP21.66■■□□□ 1.06
BRF1-203ENST00000379937 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms