RNA–Protein interactions for RNA: ENST00000378746.8

KIF3A-202, Transcript of kinesin family member 3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene KIF3A, Length 6,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-202ENST00000378746 RB1CC1Q8TDY2 1594 aa20.79■□□□□ 0.92
KIF3A-202ENST00000378746 IRX6P78412 446 aaPredicted RBP20.78■□□□□ 0.92
KIF3A-202ENST00000378746 BECN1Q14457 450 aa20.75■□□□□ 0.91
KIF3A-202ENST00000378746 CHGAP10645 457 aaKnown RBP20.71■□□□□ 0.91
KIF3A-202ENST00000378746 HIRIP3Q9BW71 556 aaPredicted RBP20.7■□□□□ 0.9
KIF3A-202ENST00000378746 NACADO15069 1562 aa20.69■□□□□ 0.9
KIF3A-202ENST00000378746 PPP4R2Q9NY27 417 aa20.69■□□□□ 0.9
KIF3A-202ENST00000378746 KDM2AQ9Y2K7 1162 aa20.68■□□□□ 0.9
KIF3A-202ENST00000378746 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
KIF3A-202ENST00000378746 PPM1GO15355 546 aaPredicted RBP20.67■□□□□ 0.9
KIF3A-202ENST00000378746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.66■□□□□ 0.9
KIF3A-202ENST00000378746 RRP7BPQ9NSQ0 103 aa20.65■□□□□ 0.9
KIF3A-202ENST00000378746 TIMELESSQ9UNS1 1208 aa20.65■□□□□ 0.9
KIF3A-202ENST00000378746 SUPT16HQ9Y5B9 1047 aaKnown RBP20.65■□□□□ 0.9
KIF3A-202ENST00000378746 STAG3Q9UJ98 1225 aa20.64■□□□□ 0.89
KIF3A-202ENST00000378746 MYH16Q9H6N6 1097 aa20.63■□□□□ 0.89
KIF3A-202ENST00000378746 ESF1Q9H501 851 aaKnown RBP20.62■□□□□ 0.89
KIF3A-202ENST00000378746 CDCA8Q53HL2 280 aa20.59■□□□□ 0.89
KIF3A-202ENST00000378746 CCER2I3L3R5 266 aa20.57■□□□□ 0.88
KIF3A-202ENST00000378746 BAZ1AQ9NRL2 1556 aaPredicted RBP20.57■□□□□ 0.88
KIF3A-202ENST00000378746 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
KIF3A-202ENST00000378746 GOLGA6L22H0YM25 854 aa20.54■□□□□ 0.88
KIF3A-202ENST00000378746 CCNB3Q8WWL7 1395 aa20.54■□□□□ 0.88
KIF3A-202ENST00000378746 NPM1P06748 294 aaKnown RBP eCLIP20.54■□□□□ 0.88
KIF3A-202ENST00000378746 NOP58Q9Y2X3 529 aaKnown RBP20.53■□□□□ 0.88
KIF3A-202ENST00000378746 TRIM44Q96DX7 344 aaPredicted RBP20.52■□□□□ 0.88
KIF3A-202ENST00000378746 FHAD1B1AJZ9 1412 aa20.51■□□□□ 0.87
KIF3A-202ENST00000378746 ARXQ96QS3 562 aa20.5■□□□□ 0.87
KIF3A-202ENST00000378746 CFAP53Q96M91 514 aa20.48■□□□□ 0.87
KIF3A-202ENST00000378746 ERICH6BQ5W0A0 696 aa20.47■□□□□ 0.87
KIF3A-202ENST00000378746 CHMP7Q8WUX9 453 aaPredicted RBP20.47■□□□□ 0.87
KIF3A-202ENST00000378746 KNSTRNQ9Y448 316 aa20.47■□□□□ 0.87
KIF3A-202ENST00000378746 NCLP19338 710 aaKnown RBP20.46■□□□□ 0.87
KIF3A-202ENST00000378746 PLEKHD1A6NEE1 506 aa20.46■□□□□ 0.87
KIF3A-202ENST00000378746 CARD11Q9BXL7 1154 aa20.46■□□□□ 0.87
KIF3A-202ENST00000378746 SIN3AQ96ST3 1273 aa20.44■□□□□ 0.86
KIF3A-202ENST00000378746 VPS8Q8N3P4 1428 aa20.44■□□□□ 0.86
KIF3A-202ENST00000378746 CFDP1Q9UEE9 299 aaPredicted RBP20.4■□□□□ 0.86
KIF3A-202ENST00000378746 SETD5Q9C0A6 1442 aa20.4■□□□□ 0.86
KIF3A-202ENST00000378746 CASC1Q6TDU7 716 aa20.36■□□□□ 0.85
KIF3A-202ENST00000378746 MS4A1P11836 297 aa20.34■□□□□ 0.85
KIF3A-202ENST00000378746 SOGA1O94964 1423 aa20.34■□□□□ 0.85
KIF3A-202ENST00000378746 CHMP4BQ9H444 224 aaKnown RBP20.34■□□□□ 0.85
KIF3A-202ENST00000378746 FTSJ3Q8IY81 847 aaKnown RBP20.33■□□□□ 0.85
KIF3A-202ENST00000378746 RGL3Q3MIN7 710 aa20.32■□□□□ 0.84
KIF3A-202ENST00000378746 RBM19Q9Y4C8 960 aaKnown RBP20.32■□□□□ 0.84
KIF3A-202ENST00000378746 LAS1LQ9Y4W2 734 aaKnown RBP20.31■□□□□ 0.84
KIF3A-202ENST00000378746 B4GALNT3Q6L9W6 998 aa20.3■□□□□ 0.84
KIF3A-202ENST00000378746 ARHGAP35Q9NRY4 1499 aa20.28■□□□□ 0.84
KIF3A-202ENST00000378746 CECR2Q9BXF3 1484 aa20.28■□□□□ 0.84
KIF3A-202ENST00000378746 TNNT2P45379 298 aaPredicted RBP20.26■□□□□ 0.83
KIF3A-202ENST00000378746 NUDCQ9Y266 331 aa20.26■□□□□ 0.83
KIF3A-202ENST00000378746 CARMIL1Q5VZK9 1371 aa20.25■□□□□ 0.83
KIF3A-202ENST00000378746 PTMAP06454 111 aaKnown RBP20.24■□□□□ 0.83
KIF3A-202ENST00000378746 MAPK8IP3Q9UPT6 1336 aa20.24■□□□□ 0.83
KIF3A-202ENST00000378746 RGS3P49796 1198 aa20.23■□□□□ 0.83
KIF3A-202ENST00000378746 TMF1P82094 1093 aa20.22■□□□□ 0.83
KIF3A-202ENST00000378746 L1TD1Q5T7N2 865 aaKnown RBP20.22■□□□□ 0.83
KIF3A-202ENST00000378746 DEKP35659 375 aaKnown RBP20.21■□□□□ 0.83
KIF3A-202ENST00000378746 HSPA5P11021 654 aaKnown RBP20.21■□□□□ 0.83
KIF3A-202ENST00000378746 NAP1L5Q96NT1 182 aaPredicted RBP20.19■□□□□ 0.82
KIF3A-202ENST00000378746 PNNQ9H307 717 aaKnown RBP20.19■□□□□ 0.82
KIF3A-202ENST00000378746 CUX2O14529 1486 aa20.18■□□□□ 0.82
KIF3A-202ENST00000378746 CCDC88BA6NC98 1476 aa20.16■□□□□ 0.82
KIF3A-202ENST00000378746 PPP1R15AO75807 674 aaPredicted RBP20.16■□□□□ 0.82
KIF3A-202ENST00000378746 KCNH8Q96L42 1107 aa20.16■□□□□ 0.82
KIF3A-202ENST00000378746 RAB3GAP2Q9H2M9 1393 aa20.15■□□□□ 0.82
KIF3A-202ENST00000378746 CC2D1BQ5T0F9 858 aaKnown RBP20.15■□□□□ 0.82
KIF3A-202ENST00000378746 HSP90AB1P08238 724 aaKnown RBP20.15■□□□□ 0.82
KIF3A-202ENST00000378746 FRAT1Q92837 279 aaPredicted RBP20.14■□□□□ 0.81
KIF3A-202ENST00000378746 CFAP44Q96MT7 982 aa20.14■□□□□ 0.81
KIF3A-202ENST00000378746 SENP3-EIF4A1A0A087X0R7 540 aa20.14■□□□□ 0.81
KIF3A-202ENST00000378746 TCERG1O14776 1098 aaKnown RBP20.13■□□□□ 0.81
KIF3A-202ENST00000378746 TSHZ2Q9NRE2 1034 aa20.13■□□□□ 0.81
KIF3A-202ENST00000378746 KTN1Q86UP2 1357 aaKnown RBP20.13■□□□□ 0.81
KIF3A-202ENST00000378746 MROH2BQ7Z745 1585 aa20.13■□□□□ 0.81
KIF3A-202ENST00000378746 HSCBQ8IWL3 235 aa20.13■□□□□ 0.81
KIF3A-202ENST00000378746 DNTTIP2Q5QJE6 756 aaKnown RBP20.12■□□□□ 0.81
KIF3A-202ENST00000378746 ZRSR1Q15695 479 aaKnown RBP20.12■□□□□ 0.81
KIF3A-202ENST00000378746 RALBP1Q15311 655 aa20.11■□□□□ 0.81
KIF3A-202ENST00000378746 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
KIF3A-202ENST00000378746 NEUROD2Q15784 382 aa20.1■□□□□ 0.81
KIF3A-202ENST00000378746 DCAF11Q8TEB1 546 aa20.09■□□□□ 0.81
KIF3A-202ENST00000378746 RTN4Q9NQC3 1192 aaKnown RBP20.09■□□□□ 0.81
KIF3A-202ENST00000378746 KANK4Q5T7N3 995 aaPredicted RBP20.08■□□□□ 0.81
KIF3A-202ENST00000378746 PTMSP20962 102 aa20.08■□□□□ 0.8
KIF3A-202ENST00000378746 FMN1Q68DA7 1419 aa20.06■□□□□ 0.8
KIF3A-202ENST00000378746 ARID4BQ4LE39 1312 aaPredicted RBP20.05■□□□□ 0.8
KIF3A-202ENST00000378746 TOP2AP11388 1531 aaKnown RBP20.05■□□□□ 0.8
KIF3A-202ENST00000378746 CDK11BP21127 795 aaKnown RBP20.05■□□□□ 0.8
KIF3A-202ENST00000378746 KANK1Q14678 1352 aa20.04■□□□□ 0.8
KIF3A-202ENST00000378746 RCAN3Q9UKA8 241 aa20.04■□□□□ 0.8
KIF3A-202ENST00000378746 EIF4G1Q04637 1599 aaKnown RBP20.03■□□□□ 0.8
KIF3A-202ENST00000378746 GOLGA6L6A8MZA4 724 aa20.02■□□□□ 0.8
KIF3A-202ENST00000378746 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
KIF3A-202ENST00000378746 POGKQ9P215 609 aa19.99■□□□□ 0.79
KIF3A-202ENST00000378746 IPO9Q96P70 1041 aaKnown RBP19.99■□□□□ 0.79
KIF3A-202ENST00000378746 ROCK2O75116 1388 aaKnown RBP19.98■□□□□ 0.79
KIF3A-202ENST00000378746 HAP1P54257 671 aaPredicted RBP19.98■□□□□ 0.79
KIF3A-202ENST00000378746 MPHOSPH9Q99550 1183 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms