RNA–Protein interactions for RNA: ENST00000378746.8

KIF3A-202, Transcript of kinesin family member 3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene KIF3A, Length 6,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-202ENST00000378746 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
KIF3A-202ENST00000378746 NISCHQ9Y2I1 1504 aa26.08■■□□□ 1.77
KIF3A-202ENST00000378746 SUPT5HO00267 1087 aaKnown RBP25.53■■□□□ 1.68
KIF3A-202ENST00000378746 SHROOM4Q9ULL8 1493 aa25■■□□□ 1.59
KIF3A-202ENST00000378746 PELP1Q8IZL8 1130 aaKnown RBP24.85■■□□□ 1.57
KIF3A-202ENST00000378746 EHMT2Q96KQ7 1210 aa24.33■■□□□ 1.49
KIF3A-202ENST00000378746 APLP2Q06481 763 aa24.32■■□□□ 1.48
KIF3A-202ENST00000378746 ZEB1P37275 1124 aaPredicted RBP24.29■■□□□ 1.48
KIF3A-202ENST00000378746 PCGF6Q9BYE7 350 aa24.26■■□□□ 1.47
KIF3A-202ENST00000378746 CENPBP07199 599 aaPredicted RBP24.1■■□□□ 1.45
KIF3A-202ENST00000378746 FAM9AQ8IZU1 332 aaPredicted RBP23.97■■□□□ 1.43
KIF3A-202ENST00000378746 MYT1Q01538 1121 aa23.83■■□□□ 1.41
KIF3A-202ENST00000378746 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
KIF3A-202ENST00000378746 CCER1Q8TC90 406 aaPredicted RBP23.77■■□□□ 1.4
KIF3A-202ENST00000378746 TTBK1Q5TCY1 1321 aaPredicted RBP23.65■■□□□ 1.38
KIF3A-202ENST00000378746 ERICH6Q7L0X2 663 aa23.63■■□□□ 1.37
KIF3A-202ENST00000378746 TRIM26Q12899 539 aaPredicted RBP23.48■■□□□ 1.35
KIF3A-202ENST00000378746 HRCP23327 699 aa23.46■■□□□ 1.35
KIF3A-202ENST00000378746 NEFLP07196 543 aa23.36■■□□□ 1.33
KIF3A-202ENST00000378746 UBTFP17480 764 aaKnown RBP23.36■■□□□ 1.33
KIF3A-202ENST00000378746 RANGAP1P46060 587 aaPredicted RBP23.24■■□□□ 1.31
KIF3A-202ENST00000378746 YTHDC1Q96MU7 727 aaKnown RBP23.19■■□□□ 1.3
KIF3A-202ENST00000378746 ATP1B4Q9UN42 357 aaPredicted RBP23.08■■□□□ 1.28
KIF3A-202ENST00000378746 CHIC1Q5VXU3 224 aa23.07■■□□□ 1.28
KIF3A-202ENST00000378746 PPARGC1BQ86YN6 1023 aaKnown RBP22.92■■□□□ 1.26
KIF3A-202ENST00000378746 LOC105371045A0A1W2PR82 267 aa22.84■■□□□ 1.25
KIF3A-202ENST00000378746 DIEXFQ68CQ4 756 aaKnown RBP22.62■■□□□ 1.21
KIF3A-202ENST00000378746 HNRNPUL2Q1KMD3 747 aaKnown RBP22.58■■□□□ 1.21
KIF3A-202ENST00000378746 DAXXQ9UER7 740 aaPredicted RBP22.55■■□□□ 1.2
KIF3A-202ENST00000378746 ITGAEP38570 1179 aa22.5■■□□□ 1.19
KIF3A-202ENST00000378746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.47■■□□□ 1.19
KIF3A-202ENST00000378746 POLR3GLQ9BT43 218 aa22.28■■□□□ 1.16
KIF3A-202ENST00000378746 RTL5Q5HYW3 569 aaPredicted RBP22.25■■□□□ 1.15
KIF3A-202ENST00000378746 GTF3C3Q9Y5Q9 886 aa22.23■■□□□ 1.15
KIF3A-202ENST00000378746 ZNF316A6NFI3 1004 aaPredicted RBP22.15■■□□□ 1.14
KIF3A-202ENST00000378746 ACIN1Q9UKV3 1341 aaKnown RBP22.08■■□□□ 1.13
KIF3A-202ENST00000378746 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
KIF3A-202ENST00000378746 ANP32CO43423 234 aa22.03■■□□□ 1.12
KIF3A-202ENST00000378746 DCAF1Q9Y4B6 1507 aa22.02■■□□□ 1.12
KIF3A-202ENST00000378746 CLSPNQ9HAW4 1339 aa21.99■■□□□ 1.11
KIF3A-202ENST00000378746 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
KIF3A-202ENST00000378746 CDK11AQ9UQ88 783 aaPredicted RBP21.98■■□□□ 1.11
KIF3A-202ENST00000378746 CNGB1Q14028 1251 aaPredicted RBP21.94■■□□□ 1.1
KIF3A-202ENST00000378746 NEUROD1Q13562 356 aa21.93■■□□□ 1.1
KIF3A-202ENST00000378746 TRIM52Q96A61 297 aa21.91■■□□□ 1.1
KIF3A-202ENST00000378746 BCANQ96GW7 911 aa21.88■■□□□ 1.09
KIF3A-202ENST00000378746 CSRNP3Q8WYN3 585 aa21.8■■□□□ 1.08
KIF3A-202ENST00000378746 ABCC9O60706 1549 aa21.74■■□□□ 1.07
KIF3A-202ENST00000378746 SLC4A1APQ9BWU0 796 aaKnown RBP21.71■■□□□ 1.07
KIF3A-202ENST00000378746 ZCCHC6Q5VYS8 1495 aaKnown RBP21.71■■□□□ 1.07
KIF3A-202ENST00000378746 PABPN1Q86U42 306 aaKnown RBP eCLIP21.62■■□□□ 1.05
KIF3A-202ENST00000378746 ANP32AP39687 249 aaKnown RBP21.61■■□□□ 1.05
KIF3A-202ENST00000378746 ZNF326Q5BKZ1 582 aaKnown RBP21.55■■□□□ 1.04
KIF3A-202ENST00000378746 ZBTB47Q9UFB7 747 aaPredicted RBP21.48■■□□□ 1.03
KIF3A-202ENST00000378746 FKBP8Q14318 412 aa21.46■■□□□ 1.03
KIF3A-202ENST00000378746 TONSLQ96HA7 1378 aa21.44■■□□□ 1.02
KIF3A-202ENST00000378746 CANXP27824 592 aaKnown RBP21.43■■□□□ 1.02
KIF3A-202ENST00000378746 SCRIBQ14160 1630 aa21.38■■□□□ 1.01
KIF3A-202ENST00000378746 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
KIF3A-202ENST00000378746 SCAF1Q9H7N4 1312 aaKnown RBP21.34■■□□□ 1.01
KIF3A-202ENST00000378746 P3H3Q8IVL6 736 aa21.32■■□□□ 1
KIF3A-202ENST00000378746 HNRNPUQ00839 825 aaKnown RBP eCLIP21.3■■□□□ 1
KIF3A-202ENST00000378746 NEFMP07197 916 aa21.28■■□□□ 1
KIF3A-202ENST00000378746 DDX10Q13206 875 aaKnown RBP21.26■□□□□ 0.99
KIF3A-202ENST00000378746 NPM2Q86SE8 214 aaKnown RBP21.24■□□□□ 0.99
KIF3A-202ENST00000378746 EEA1Q15075 1411 aa21.22■□□□□ 0.99
KIF3A-202ENST00000378746 MYO15BQ96JP2 1530 aa21.2■□□□□ 0.98
KIF3A-202ENST00000378746 MIER1Q8N108 512 aa21.18■□□□□ 0.98
KIF3A-202ENST00000378746 CLIP1P30622 1438 aa21.15■□□□□ 0.98
KIF3A-202ENST00000378746 UPF2Q9HAU5 1272 aaKnown RBP21.14■□□□□ 0.98
KIF3A-202ENST00000378746 FAM9BQ8IZU0 186 aa21.13■□□□□ 0.97
KIF3A-202ENST00000378746 ANP32BQ92688 251 aaKnown RBP21.13■□□□□ 0.97
KIF3A-202ENST00000378746 FBLN2P98095 1184 aa21.12■□□□□ 0.97
KIF3A-202ENST00000378746 ZNF777Q9ULD5 760 aaPredicted RBP21.11■□□□□ 0.97
KIF3A-202ENST00000378746 CCDC136Q96JN2 1154 aa21.11■□□□□ 0.97
KIF3A-202ENST00000378746 GOLGA3Q08378 1498 aa21.09■□□□□ 0.97
KIF3A-202ENST00000378746 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.08■□□□□ 0.97
KIF3A-202ENST00000378746 ARID3CA6NKF2 412 aa21.05■□□□□ 0.96
KIF3A-202ENST00000378746 CEP162Q5TB80 1403 aa21.05■□□□□ 0.96
KIF3A-202ENST00000378746 TMC1Q8TDI8 760 aa21.05■□□□□ 0.96
KIF3A-202ENST00000378746 MRS2Q9HD23 443 aa21.02■□□□□ 0.96
KIF3A-202ENST00000378746 GLIPR1L2Q4G1C9 344 aa20.99■□□□□ 0.95
KIF3A-202ENST00000378746 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
KIF3A-202ENST00000378746 HSP90AA1P07900 732 aaKnown RBP20.97■□□□□ 0.95
KIF3A-202ENST00000378746 EIF5BO60841 1220 aaKnown RBP20.97■□□□□ 0.95
KIF3A-202ENST00000378746 TNIKQ9UKE5 1360 aa20.96■□□□□ 0.95
KIF3A-202ENST00000378746 MTUS2Q5JR59 1369 aa20.95■□□□□ 0.94
KIF3A-202ENST00000378746 EIF4G2P78344 907 aaKnown RBP eCLIP20.94■□□□□ 0.94
KIF3A-202ENST00000378746 NBR1Q14596 966 aa20.92■□□□□ 0.94
KIF3A-202ENST00000378746 WDR43Q15061 677 aaKnown RBP eCLIP20.9■□□□□ 0.94
KIF3A-202ENST00000378746 DDRGK1Q96HY6 314 aa20.9■□□□□ 0.94
KIF3A-202ENST00000378746 ANP32EQ9BTT0 268 aa20.89■□□□□ 0.93
KIF3A-202ENST00000378746 BCL11AQ9H165 835 aa20.88■□□□□ 0.93
KIF3A-202ENST00000378746 CHIC2Q9UKJ5 165 aa20.88■□□□□ 0.93
KIF3A-202ENST00000378746 SLC24A1O60721 1099 aa20.86■□□□□ 0.93
KIF3A-202ENST00000378746 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
KIF3A-202ENST00000378746 SALL2Q9Y467 1007 aaPredicted RBP20.81■□□□□ 0.92
KIF3A-202ENST00000378746 WRNQ14191 1432 aaPredicted RBP eCLIP20.8■□□□□ 0.92
KIF3A-202ENST00000378746 TSPY4P0CV99 314 aa20.8■□□□□ 0.92
KIF3A-202ENST00000378746 TSPY10P0CW01 314 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms