RNA–Protein interactions for RNA: ENST00000378308.6

USP9X-202, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP9X, Length 8,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-202ENST00000378308 CLSTN1O94985 981 aa17.64■□□□□ 0.41
USP9X-202ENST00000378308 DNTTIP2Q5QJE6 756 aaKnown RBP17.61■□□□□ 0.41
USP9X-202ENST00000378308 PTMAP06454 111 aaKnown RBP17.6■□□□□ 0.41
USP9X-202ENST00000378308 TNNT2P45379 298 aaPredicted RBP17.58■□□□□ 0.4
USP9X-202ENST00000378308 DDX10Q13206 875 aaKnown RBP17.58■□□□□ 0.4
USP9X-202ENST00000378308 ARID4BQ4LE39 1312 aaPredicted RBP17.58■□□□□ 0.4
USP9X-202ENST00000378308 CASC1Q6TDU7 716 aa17.57■□□□□ 0.4
USP9X-202ENST00000378308 CHIC2Q9UKJ5 165 aa17.56■□□□□ 0.4
USP9X-202ENST00000378308 GOLGA6L22H0YM25 854 aa17.56■□□□□ 0.4
USP9X-202ENST00000378308 BECN1Q14457 450 aa17.56■□□□□ 0.4
USP9X-202ENST00000378308 PPM1GO15355 546 aaPredicted RBP17.55■□□□□ 0.4
USP9X-202ENST00000378308 GOLGA2Q08379 1002 aa17.53■□□□□ 0.4
USP9X-202ENST00000378308 LMOD2Q6P5Q4 547 aa17.52■□□□□ 0.39
USP9X-202ENST00000378308 IRX6P78412 446 aaPredicted RBP17.51■□□□□ 0.39
USP9X-202ENST00000378308 ACIN1Q9UKV3 1341 aaKnown RBP17.51■□□□□ 0.39
USP9X-202ENST00000378308 NAP1L2Q9ULW6 460 aaPredicted RBP17.5■□□□□ 0.39
USP9X-202ENST00000378308 LAS1LQ9Y4W2 734 aaKnown RBP17.48■□□□□ 0.39
USP9X-202ENST00000378308 PLCB2Q00722 1185 aa17.46■□□□□ 0.39
USP9X-202ENST00000378308 FTSJ3Q8IY81 847 aaKnown RBP17.46■□□□□ 0.39
USP9X-202ENST00000378308 MRS2Q9HD23 443 aa17.46■□□□□ 0.39
USP9X-202ENST00000378308 FGD1P98174 961 aa17.44■□□□□ 0.38
USP9X-202ENST00000378308 ISY1Q9ULR0 285 aaKnown RBP17.43■□□□□ 0.38
USP9X-202ENST00000378308 PRM3Q9NNZ6 103 aa17.43■□□□□ 0.38
USP9X-202ENST00000378308 TSPY4P0CV99 314 aa17.42■□□□□ 0.38
USP9X-202ENST00000378308 TSPY10P0CW01 314 aa17.42■□□□□ 0.38
USP9X-202ENST00000378308 DDRGK1Q96HY6 314 aa17.41■□□□□ 0.38
USP9X-202ENST00000378308 GOLGA6L6A8MZA4 724 aa17.41■□□□□ 0.38
USP9X-202ENST00000378308 OS9Q13438 667 aaPredicted RBP17.41■□□□□ 0.38
USP9X-202ENST00000378308 ANP32EQ9BTT0 268 aa17.37■□□□□ 0.37
USP9X-202ENST00000378308 SCRIBQ14160 1630 aa17.37■□□□□ 0.37
USP9X-202ENST00000378308 KCNJ4P48050 445 aa17.37■□□□□ 0.37
USP9X-202ENST00000378308 KCNH8Q96L42 1107 aa17.35■□□□□ 0.37
USP9X-202ENST00000378308 SENP3-EIF4A1A0A087X0R7 540 aa17.35■□□□□ 0.37
USP9X-202ENST00000378308 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
USP9X-202ENST00000378308 CFAP53Q96M91 514 aa17.32■□□□□ 0.36
USP9X-202ENST00000378308 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
USP9X-202ENST00000378308 AMER1Q5JTC6 1135 aaPredicted RBP17.3■□□□□ 0.36
USP9X-202ENST00000378308 NAP1L5Q96NT1 182 aaPredicted RBP17.29■□□□□ 0.36
USP9X-202ENST00000378308 RGL3Q3MIN7 710 aa17.28■□□□□ 0.36
USP9X-202ENST00000378308 NEUROD2Q15784 382 aa17.27■□□□□ 0.36
USP9X-202ENST00000378308 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
USP9X-202ENST00000378308 NRDCO43847 1150 aa17.26■□□□□ 0.35
USP9X-202ENST00000378308 HSP90AB1P08238 724 aaKnown RBP17.26■□□□□ 0.35
USP9X-202ENST00000378308 MTUS2Q5JR59 1369 aa17.26■□□□□ 0.35
USP9X-202ENST00000378308 MAPK8IP3Q9UPT6 1336 aa17.25■□□□□ 0.35
USP9X-202ENST00000378308 KNSTRNQ9Y448 316 aa17.25■□□□□ 0.35
USP9X-202ENST00000378308 NOC3LQ8WTT2 800 aaKnown RBP17.24■□□□□ 0.35
USP9X-202ENST00000378308 GNL2Q13823 731 aaKnown RBP17.23■□□□□ 0.35
USP9X-202ENST00000378308 DRC7Q8IY82 874 aa17.23■□□□□ 0.35
USP9X-202ENST00000378308 KIAA2012Q0VF49 1180 aa17.22■□□□□ 0.35
USP9X-202ENST00000378308 GOLGA6L4A6NEF3 574 aa17.22■□□□□ 0.35
USP9X-202ENST00000378308 POGKQ9P215 609 aa17.2■□□□□ 0.34
USP9X-202ENST00000378308 CHAF1AQ13111 956 aaPredicted RBP17.2■□□□□ 0.34
USP9X-202ENST00000378308 RRP7BPQ9NSQ0 103 aa17.19■□□□□ 0.34
USP9X-202ENST00000378308 SOX12O15370 315 aa17.18■□□□□ 0.34
USP9X-202ENST00000378308 FRAT1Q92837 279 aaPredicted RBP17.18■□□□□ 0.34
USP9X-202ENST00000378308 EIF4G2P78344 907 aaKnown RBP eCLIP17.18■□□□□ 0.34
USP9X-202ENST00000378308 PDE4CQ08493 712 aa17.16■□□□□ 0.34
USP9X-202ENST00000378308 ERICH6BQ5W0A0 696 aa17.15■□□□□ 0.34
USP9X-202ENST00000378308 PNNQ9H307 717 aaKnown RBP17.15■□□□□ 0.34
USP9X-202ENST00000378308 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
USP9X-202ENST00000378308 RTN4Q9NQC3 1192 aaKnown RBP17.14■□□□□ 0.33
USP9X-202ENST00000378308 TMX4Q9H1E5 349 aaPredicted RBP17.14■□□□□ 0.33
USP9X-202ENST00000378308 L1TD1Q5T7N2 865 aaKnown RBP17.14■□□□□ 0.33
USP9X-202ENST00000378308 U2SURPO15042 1029 aaKnown RBP17.13■□□□□ 0.33
USP9X-202ENST00000378308 RGS3P49796 1198 aa17.13■□□□□ 0.33
USP9X-202ENST00000378308 CDCA8Q53HL2 280 aa17.12■□□□□ 0.33
USP9X-202ENST00000378308 NUDCQ9Y266 331 aa17.11■□□□□ 0.33
USP9X-202ENST00000378308 ANO8Q9HCE9 1232 aaPredicted RBP17.1■□□□□ 0.33
USP9X-202ENST00000378308 KRI1Q8N9T8 703 aaKnown RBP17.09■□□□□ 0.33
USP9X-202ENST00000378308 ZNF330Q9Y3S2 320 aaPredicted RBP17.08■□□□□ 0.33
USP9X-202ENST00000378308 KAT6BQ8WYB5 2073 aa17.07■□□□□ 0.32
USP9X-202ENST00000378308 MCCP23508 829 aa17.06■□□□□ 0.32
USP9X-202ENST00000378308 SPRYD3Q8NCJ5 442 aa17.06■□□□□ 0.32
USP9X-202ENST00000378308 A0A0U1RQG5 324 aaPredicted RBP17.06■□□□□ 0.32
USP9X-202ENST00000378308 MSNP26038 577 aaKnown RBP17.06■□□□□ 0.32
USP9X-202ENST00000378308 CHMP4BQ9H444 224 aaKnown RBP17.05■□□□□ 0.32
USP9X-202ENST00000378308 CC2D1BQ5T0F9 858 aaKnown RBP17.04■□□□□ 0.32
USP9X-202ENST00000378308 G3V3G9 751 aa17.03■□□□□ 0.32
USP9X-202ENST00000378308 DCAF8Q5TAQ9 597 aa17.03■□□□□ 0.32
USP9X-202ENST00000378308 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.03■□□□□ 0.32
USP9X-202ENST00000378308 HSCBQ8IWL3 235 aa17.02■□□□□ 0.32
USP9X-202ENST00000378308 PLEKHD1A6NEE1 506 aa17.01■□□□□ 0.31
USP9X-202ENST00000378308 MLECQ14165 292 aa17.01■□□□□ 0.31
USP9X-202ENST00000378308 CARD11Q9BXL7 1154 aa17.01■□□□□ 0.31
USP9X-202ENST00000378308 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
USP9X-202ENST00000378308 RTF1Q92541 710 aaKnown RBP16.99■□□□□ 0.31
USP9X-202ENST00000378308 CCDC9Q9Y3X0 531 aaKnown RBP16.99■□□□□ 0.31
USP9X-202ENST00000378308 FBXO3Q9UK99 471 aa16.99■□□□□ 0.31
USP9X-202ENST00000378308 SUPT16HQ9Y5B9 1047 aaKnown RBP16.99■□□□□ 0.31
USP9X-202ENST00000378308 APBB1O00213 710 aa16.98■□□□□ 0.31
USP9X-202ENST00000378308 KIAA1211Q6ZU35 1233 aa16.98■□□□□ 0.31
USP9X-202ENST00000378308 VPS53Q5VIR6 699 aa16.96■□□□□ 0.31
USP9X-202ENST00000378308 CREBRFQ8IUR6 639 aa16.96■□□□□ 0.31
USP9X-202ENST00000378308 CHMP3Q9Y3E7 222 aa16.96■□□□□ 0.31
USP9X-202ENST00000378308 MIER1Q8N108 512 aa16.96■□□□□ 0.3
USP9X-202ENST00000378308 ARID3AQ99856 593 aa16.95■□□□□ 0.3
USP9X-202ENST00000378308 SRPK2P78362 688 aaKnown RBP16.95■□□□□ 0.3
USP9X-202ENST00000378308 MS4A1P11836 297 aa16.95■□□□□ 0.3
USP9X-202ENST00000378308 SAFB2Q14151 953 aaKnown RBP eCLIP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms