RNA–Protein interactions for RNA: ENST00000378123.4

PCDHA8-201, Transcript of protocadherin alpha 8, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA8, Length 2,616 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-201ENST00000378123 PHLDB1Q86UU1 1377 aa26.15■■□□□ 1.78
PCDHA8-201ENST00000378123 POLA1P09884 1462 aaPredicted RBP26.14■■□□□ 1.78
PCDHA8-201ENST00000378123 RAB3GAP2Q9H2M9 1393 aa26.14■■□□□ 1.78
PCDHA8-201ENST00000378123 FHOD3Q2V2M9 1422 aa26.13■■□□□ 1.77
PCDHA8-201ENST00000378123 TOPBP1Q92547 1522 aa26.12■■□□□ 1.77
PCDHA8-201ENST00000378123 LRRC9Q6ZRR7 1453 aa26.12■■□□□ 1.77
PCDHA8-201ENST00000378123 DNAJC5BQ9UF47 199 aa26.1■■□□□ 1.77
PCDHA8-201ENST00000378123 DNMBPQ6XZF7 1577 aa26.09■■□□□ 1.77
PCDHA8-201ENST00000378123 PCF11O94913 1555 aaKnown RBP26.06■■□□□ 1.76
PCDHA8-201ENST00000378123 ABCA10Q8WWZ4 1543 aa26.05■■□□□ 1.76
PCDHA8-201ENST00000378123 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
PCDHA8-201ENST00000378123 MAP3K1Q13233 1512 aa26.02■■□□□ 1.76
PCDHA8-201ENST00000378123 PELP1Q8IZL8 1130 aaKnown RBP26.01■■□□□ 1.76
PCDHA8-201ENST00000378123 TDRD9Q8NDG6 1382 aaKnown RBP26.01■■□□□ 1.75
PCDHA8-201ENST00000378123 SIN3AQ96ST3 1273 aa25.98■■□□□ 1.75
PCDHA8-201ENST00000378123 SETD5Q9C0A6 1442 aa25.98■■□□□ 1.75
PCDHA8-201ENST00000378123 MAPKBP1O60336 1514 aa25.97■■□□□ 1.75
PCDHA8-201ENST00000378123 URB2Q14146 1524 aaKnown RBP25.96■■□□□ 1.75
PCDHA8-201ENST00000378123 CFAP43Q8NDM7 1665 aa25.9■■□□□ 1.74
PCDHA8-201ENST00000378123 CASKIN1Q8WXD9 1431 aa25.87■■□□□ 1.73
PCDHA8-201ENST00000378123 FYCO1Q9BQS8 1478 aa25.85■■□□□ 1.73
PCDHA8-201ENST00000378123 CUL7Q14999 1698 aa25.84■■□□□ 1.73
PCDHA8-201ENST00000378123 EFCAB5A4FU69 1503 aa25.82■■□□□ 1.72
PCDHA8-201ENST00000378123 CTTNBP2Q8WZ74 1663 aa25.81■■□□□ 1.72
PCDHA8-201ENST00000378123 LAMC3Q9Y6N6 1575 aa25.79■■□□□ 1.72
PCDHA8-201ENST00000378123 GAPVD1Q14C86 1478 aa25.78■■□□□ 1.72
PCDHA8-201ENST00000378123 KCNH8Q96L42 1107 aa25.78■■□□□ 1.72
PCDHA8-201ENST00000378123 HIRIP3Q9BW71 556 aaPredicted RBP25.78■■□□□ 1.72
PCDHA8-201ENST00000378123 MTUS2Q5JR59 1369 aa25.77■■□□□ 1.72
PCDHA8-201ENST00000378123 FMN1Q68DA7 1419 aa25.76■■□□□ 1.71
PCDHA8-201ENST00000378123 WDR97A6NE52 1622 aa25.75■■□□□ 1.71
PCDHA8-201ENST00000378123 SNAPC4Q5SXM2 1469 aa25.75■■□□□ 1.71
PCDHA8-201ENST00000378123 AQRO60306 1485 aaKnown RBP eCLIP25.74■■□□□ 1.71
PCDHA8-201ENST00000378123 FGD6Q6ZV73 1430 aa25.72■■□□□ 1.71
PCDHA8-201ENST00000378123 PDS5BQ9NTI5 1447 aa25.72■■□□□ 1.71
PCDHA8-201ENST00000378123 ABCA5Q8WWZ7 1642 aa25.71■■□□□ 1.71
PCDHA8-201ENST00000378123 DDX10Q13206 875 aaKnown RBP25.69■■□□□ 1.7
PCDHA8-201ENST00000378123 PTPRKQ15262 1439 aa25.68■■□□□ 1.7
PCDHA8-201ENST00000378123 ARID3CA6NKF2 412 aa25.67■■□□□ 1.7
PCDHA8-201ENST00000378123 KIF21AQ7Z4S6 1674 aa25.66■■□□□ 1.7
PCDHA8-201ENST00000378123 LRRIQ1Q96JM4 1722 aa25.64■■□□□ 1.7
PCDHA8-201ENST00000378123 SAMD9Q5K651 1589 aa25.62■■□□□ 1.69
PCDHA8-201ENST00000378123 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.6■■□□□ 1.69
PCDHA8-201ENST00000378123 NCOA2Q15596 1464 aa25.6■■□□□ 1.69
PCDHA8-201ENST00000378123 PPP1R15AO75807 674 aaPredicted RBP25.59■■□□□ 1.69
PCDHA8-201ENST00000378123 GRIN2BQ13224 1484 aa25.59■■□□□ 1.69
PCDHA8-201ENST00000378123 CCDC18Q5T9S5 1454 aa25.57■■□□□ 1.68
PCDHA8-201ENST00000378123 CHIC2Q9UKJ5 165 aa25.57■■□□□ 1.68
PCDHA8-201ENST00000378123 MYOM3Q5VTT5 1437 aa25.54■■□□□ 1.68
PCDHA8-201ENST00000378123 TARBP1Q13395 1621 aaKnown RBP25.54■■□□□ 1.68
PCDHA8-201ENST00000378123 RRP7BPQ9NSQ0 103 aa25.53■■□□□ 1.68
PCDHA8-201ENST00000378123 MAGI3Q5TCQ9 1506 aa25.52■■□□□ 1.68
PCDHA8-201ENST00000378123 HFM1A2PYH4 1435 aa25.5■■□□□ 1.67
PCDHA8-201ENST00000378123 TONSLQ96HA7 1378 aa25.49■■□□□ 1.67
PCDHA8-201ENST00000378123 TIMELESSQ9UNS1 1208 aa25.49■■□□□ 1.67
PCDHA8-201ENST00000378123 SUPT16HQ9Y5B9 1047 aaKnown RBP25.49■■□□□ 1.67
PCDHA8-201ENST00000378123 NAIPQ13075 1403 aa25.48■■□□□ 1.67
PCDHA8-201ENST00000378123 PTPN23Q9H3S7 1636 aa25.47■■□□□ 1.67
PCDHA8-201ENST00000378123 UACAQ9BZF9 1416 aa25.45■■□□□ 1.66
PCDHA8-201ENST00000378123 SUPT6HQ7KZ85 1726 aaKnown RBP25.44■■□□□ 1.66
PCDHA8-201ENST00000378123 EHBP1L1Q8N3D4 1523 aa25.42■■□□□ 1.66
PCDHA8-201ENST00000378123 CDK13Q14004 1512 aaKnown RBP25.4■■□□□ 1.66
PCDHA8-201ENST00000378123 UGGT2Q9NYU1 1516 aa25.4■■□□□ 1.66
PCDHA8-201ENST00000378123 PBRM1Q86U86 1689 aa25.39■■□□□ 1.65
PCDHA8-201ENST00000378123 TRIM52Q96A61 297 aa25.39■■□□□ 1.65
PCDHA8-201ENST00000378123 THOC2Q8NI27 1593 aaKnown RBP25.37■■□□□ 1.65
PCDHA8-201ENST00000378123 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
PCDHA8-201ENST00000378123 IQGAP2Q13576 1575 aa25.36■■□□□ 1.65
PCDHA8-201ENST00000378123 EPRSP07814 1512 aaKnown RBP25.35■■□□□ 1.65
PCDHA8-201ENST00000378123 ARHGEF11O15085 1522 aa25.33■■□□□ 1.65
PCDHA8-201ENST00000378123 FOXD1Q16676 465 aa25.33■■□□□ 1.64
PCDHA8-201ENST00000378123 ADAMTS12P58397 1594 aa25.32■■□□□ 1.64
PCDHA8-201ENST00000378123 MRC2Q9UBG0 1479 aa25.32■■□□□ 1.64
PCDHA8-201ENST00000378123 HECW1Q76N89 1606 aa25.3■■□□□ 1.64
PCDHA8-201ENST00000378123 ANP32CO43423 234 aa25.29■■□□□ 1.64
PCDHA8-201ENST00000378123 KDM6BO15054 1643 aa25.28■■□□□ 1.64
PCDHA8-201ENST00000378123 BCANQ96GW7 911 aa25.26■■□□□ 1.63
PCDHA8-201ENST00000378123 ZNF644Q9H582 1327 aaPredicted RBP25.25■■□□□ 1.63
PCDHA8-201ENST00000378123 DENND4BO75064 1496 aaPredicted RBP25.25■■□□□ 1.63
PCDHA8-201ENST00000378123 TCOF1Q13428 1488 aaKnown RBP25.23■■□□□ 1.63
PCDHA8-201ENST00000378123 WDR62O43379 1518 aa25.23■■□□□ 1.63
PCDHA8-201ENST00000378123 KDM5BQ9UGL1 1544 aa25.22■■□□□ 1.63
PCDHA8-201ENST00000378123 MPHOSPH9Q99550 1183 aa25.21■■□□□ 1.63
PCDHA8-201ENST00000378123 HSPA5P11021 654 aaKnown RBP25.16■■□□□ 1.62
PCDHA8-201ENST00000378123 FBLN2P98095 1184 aa25.16■■□□□ 1.62
PCDHA8-201ENST00000378123 CCER2I3L3R5 266 aa25.15■■□□□ 1.62
PCDHA8-201ENST00000378123 FKBP8Q14318 412 aa25.15■■□□□ 1.62
PCDHA8-201ENST00000378123 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
PCDHA8-201ENST00000378123 DISP1Q96F81 1524 aa25.15■■□□□ 1.62
PCDHA8-201ENST00000378123 MIA2Q96PC5 1412 aa25.14■■□□□ 1.61
PCDHA8-201ENST00000378123 L3MBTL2Q969R5 705 aa25.14■■□□□ 1.61
PCDHA8-201ENST00000378123 GCC2Q8IWJ2 1684 aa25.12■■□□□ 1.61
PCDHA8-201ENST00000378123 KIAA0586Q9BVV6 1533 aa25.11■■□□□ 1.61
PCDHA8-201ENST00000378123 NUP153P49790 1475 aaKnown RBP25.11■■□□□ 1.61
PCDHA8-201ENST00000378123 WASHC2AQ641Q2 1341 aa25.1■■□□□ 1.61
PCDHA8-201ENST00000378123 KIAA0556O60303 1618 aa25.09■■□□□ 1.61
PCDHA8-201ENST00000378123 DAPK1P53355 1430 aa25.07■■□□□ 1.6
PCDHA8-201ENST00000378123 CHMP7Q8WUX9 453 aaPredicted RBP25.07■■□□□ 1.6
PCDHA8-201ENST00000378123 GRIN2AQ12879 1464 aa25.07■■□□□ 1.6
PCDHA8-201ENST00000378123 ABCC5O15440 1437 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms