RNA–Protein interactions for RNA: ENST00000377016.8

GABBR1-204, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5 BASIC

Gene GABBR1, Length 4,299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-204ENST00000377016 ZNF777Q9ULD5 760 aaPredicted RBP24.95■■□□□ 1.58
GABBR1-204ENST00000377016 MYT1LQ9UL68 1186 aa24.92■■□□□ 1.58
GABBR1-204ENST00000377016 RAB3GAP2Q9H2M9 1393 aa24.92■■□□□ 1.58
GABBR1-204ENST00000377016 SMARCA2P51531 1590 aa24.89■■□□□ 1.57
GABBR1-204ENST00000377016 TSHZ2Q9NRE2 1034 aa24.89■■□□□ 1.57
GABBR1-204ENST00000377016 SETD5Q9C0A6 1442 aa24.88■■□□□ 1.57
GABBR1-204ENST00000377016 FBLN2P98095 1184 aa24.87■■□□□ 1.57
GABBR1-204ENST00000377016 NPM2Q86SE8 214 aaKnown RBP24.85■■□□□ 1.57
GABBR1-204ENST00000377016 TIMELESSQ9UNS1 1208 aa24.85■■□□□ 1.57
GABBR1-204ENST00000377016 CCDC136Q96JN2 1154 aa24.85■■□□□ 1.57
GABBR1-204ENST00000377016 KCNH8Q96L42 1107 aa24.84■■□□□ 1.57
GABBR1-204ENST00000377016 CARMIL1Q5VZK9 1371 aa24.83■■□□□ 1.57
GABBR1-204ENST00000377016 CUX2O14529 1486 aa24.82■■□□□ 1.56
GABBR1-204ENST00000377016 FHAD1B1AJZ9 1412 aa24.8■■□□□ 1.56
GABBR1-204ENST00000377016 CCER2I3L3R5 266 aa24.8■■□□□ 1.56
GABBR1-204ENST00000377016 TMC1Q8TDI8 760 aa24.79■■□□□ 1.56
GABBR1-204ENST00000377016 SALL2Q9Y467 1007 aaPredicted RBP24.78■■□□□ 1.56
GABBR1-204ENST00000377016 NBR1Q14596 966 aa24.78■■□□□ 1.56
GABBR1-204ENST00000377016 RBM19Q9Y4C8 960 aaKnown RBP24.77■■□□□ 1.56
GABBR1-204ENST00000377016 SLC4A1APQ9BWU0 796 aaKnown RBP24.73■■□□□ 1.55
GABBR1-204ENST00000377016 PPP1R15AO75807 674 aaPredicted RBP24.69■■□□□ 1.54
GABBR1-204ENST00000377016 ATAD2BQ9ULI0 1458 aa24.69■■□□□ 1.54
GABBR1-204ENST00000377016 SENP3-EIF4A1A0A087X0R7 540 aa24.69■■□□□ 1.54
GABBR1-204ENST00000377016 ZBTB47Q9UFB7 747 aaPredicted RBP24.66■■□□□ 1.54
GABBR1-204ENST00000377016 PPP4R2Q9NY27 417 aa24.64■■□□□ 1.54
GABBR1-204ENST00000377016 KDM2AQ9Y2K7 1162 aa24.63■■□□□ 1.53
GABBR1-204ENST00000377016 ARHGAP35Q9NRY4 1499 aa24.61■■□□□ 1.53
GABBR1-204ENST00000377016 KIF21BO75037 1637 aa24.61■■□□□ 1.53
GABBR1-204ENST00000377016 B4GALNT3Q6L9W6 998 aa24.6■■□□□ 1.53
GABBR1-204ENST00000377016 HSPA5P11021 654 aaKnown RBP24.56■■□□□ 1.52
GABBR1-204ENST00000377016 TSPY4P0CV99 314 aa24.47■■□□□ 1.51
GABBR1-204ENST00000377016 TSPY10P0CW01 314 aa24.47■■□□□ 1.51
GABBR1-204ENST00000377016 CANXP27824 592 aaKnown RBP24.47■■□□□ 1.51
GABBR1-204ENST00000377016 SYNJ1O43426 1573 aa24.47■■□□□ 1.51
GABBR1-204ENST00000377016 BCL11AQ9H165 835 aa24.47■■□□□ 1.51
GABBR1-204ENST00000377016 FOXD1Q16676 465 aa24.44■■□□□ 1.5
GABBR1-204ENST00000377016 FHOD3Q2V2M9 1422 aa24.44■■□□□ 1.5
GABBR1-204ENST00000377016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.41■■□□□ 1.5
GABBR1-204ENST00000377016 CFDP1Q9UEE9 299 aaPredicted RBP24.39■■□□□ 1.5
GABBR1-204ENST00000377016 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
GABBR1-204ENST00000377016 CARD11Q9BXL7 1154 aa24.37■■□□□ 1.49
GABBR1-204ENST00000377016 NOP58Q9Y2X3 529 aaKnown RBP24.36■■□□□ 1.49
GABBR1-204ENST00000377016 FMN1Q68DA7 1419 aa24.36■■□□□ 1.49
GABBR1-204ENST00000377016 RRBP1Q9P2E9 1410 aaKnown RBP24.33■■□□□ 1.49
GABBR1-204ENST00000377016 ERICH6BQ5W0A0 696 aa24.33■■□□□ 1.49
GABBR1-204ENST00000377016 MPHOSPH9Q99550 1183 aa24.33■■□□□ 1.49
GABBR1-204ENST00000377016 L3MBTL2Q969R5 705 aa24.31■■□□□ 1.48
GABBR1-204ENST00000377016 IGF1RP08069 1367 aa24.31■■□□□ 1.48
GABBR1-204ENST00000377016 RGL3Q3MIN7 710 aa24.3■■□□□ 1.48
GABBR1-204ENST00000377016 PHLDB1Q86UU1 1377 aa24.3■■□□□ 1.48
GABBR1-204ENST00000377016 CHMP7Q8WUX9 453 aaPredicted RBP24.29■■□□□ 1.48
GABBR1-204ENST00000377016 CADPSQ9ULU8 1353 aa24.28■■□□□ 1.48
GABBR1-204ENST00000377016 WDR43Q15061 677 aaKnown RBP eCLIP24.28■■□□□ 1.48
GABBR1-204ENST00000377016 EIF4G1Q04637 1599 aaKnown RBP24.26■■□□□ 1.47
GABBR1-204ENST00000377016 TDRD9Q8NDG6 1382 aaKnown RBP24.26■■□□□ 1.47
GABBR1-204ENST00000377016 PRXQ9BXM0 1461 aa24.24■■□□□ 1.47
GABBR1-204ENST00000377016 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.24■■□□□ 1.47
GABBR1-204ENST00000377016 ERICH3Q5RHP9 1530 aa24.23■■□□□ 1.47
GABBR1-204ENST00000377016 PLEKHD1A6NEE1 506 aa24.23■■□□□ 1.47
GABBR1-204ENST00000377016 DEKP35659 375 aaKnown RBP24.2■■□□□ 1.46
GABBR1-204ENST00000377016 CCDC18Q5T9S5 1454 aa24.19■■□□□ 1.46
GABBR1-204ENST00000377016 LRRC9Q6ZRR7 1453 aa24.19■■□□□ 1.46
GABBR1-204ENST00000377016 EIF5BO60841 1220 aaKnown RBP24.16■■□□□ 1.46
GABBR1-204ENST00000377016 LAS1LQ9Y4W2 734 aaKnown RBP24.16■■□□□ 1.46
GABBR1-204ENST00000377016 PRKRIP1Q9H875 184 aaPredicted RBP24.15■■□□□ 1.46
GABBR1-204ENST00000377016 DCAF11Q8TEB1 546 aa24.13■■□□□ 1.45
GABBR1-204ENST00000377016 PKD2Q13563 968 aa24.13■■□□□ 1.45
GABBR1-204ENST00000377016 DDRGK1Q96HY6 314 aa24.1■■□□□ 1.45
GABBR1-204ENST00000377016 UPF2Q9HAU5 1272 aaKnown RBP24.1■■□□□ 1.45
GABBR1-204ENST00000377016 TOP2BQ02880 1626 aa24.1■■□□□ 1.45
GABBR1-204ENST00000377016 NEFMP07197 916 aa24.09■■□□□ 1.45
GABBR1-204ENST00000377016 CC2D1BQ5T0F9 858 aaKnown RBP24.08■■□□□ 1.45
GABBR1-204ENST00000377016 NUDCQ9Y266 331 aa24.07■■□□□ 1.44
GABBR1-204ENST00000377016 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
GABBR1-204ENST00000377016 FGD6Q6ZV73 1430 aa24.07■■□□□ 1.44
GABBR1-204ENST00000377016 CHGAP10645 457 aaKnown RBP24.07■■□□□ 1.44
GABBR1-204ENST00000377016 PPM1GO15355 546 aaPredicted RBP24.04■■□□□ 1.44
GABBR1-204ENST00000377016 FANCIQ9NVI1 1328 aa24.04■■□□□ 1.44
GABBR1-204ENST00000377016 UACAQ9BZF9 1416 aa24.03■■□□□ 1.44
GABBR1-204ENST00000377016 KNSTRNQ9Y448 316 aa24.03■■□□□ 1.44
GABBR1-204ENST00000377016 ZBED9Q6R2W3 1325 aa24.02■■□□□ 1.44
GABBR1-204ENST00000377016 WDR97A6NE52 1622 aa24■■□□□ 1.43
GABBR1-204ENST00000377016 NCAPD3P42695 1498 aa24■■□□□ 1.43
GABBR1-204ENST00000377016 WASHC2AQ641Q2 1341 aa23.99■■□□□ 1.43
GABBR1-204ENST00000377016 RTN4Q9NQC3 1192 aaKnown RBP23.98■■□□□ 1.43
GABBR1-204ENST00000377016 RCAN3Q9UKA8 241 aa23.98■■□□□ 1.43
GABBR1-204ENST00000377016 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
GABBR1-204ENST00000377016 ARXQ96QS3 562 aa23.97■■□□□ 1.43
GABBR1-204ENST00000377016 RGS3P49796 1198 aa23.96■■□□□ 1.43
GABBR1-204ENST00000377016 CUX1P39880 1505 aa23.96■■□□□ 1.43
GABBR1-204ENST00000377016 IPO9Q96P70 1041 aaKnown RBP23.95■■□□□ 1.42
GABBR1-204ENST00000377016 RAD54L2Q9Y4B4 1467 aa23.93■■□□□ 1.42
GABBR1-204ENST00000377016 MYOM3Q5VTT5 1437 aa23.92■■□□□ 1.42
GABBR1-204ENST00000377016 NUP155O75694 1391 aa23.92■■□□□ 1.42
GABBR1-204ENST00000377016 CFTRP13569 1480 aa23.92■■□□□ 1.42
GABBR1-204ENST00000377016 TIAM1Q13009 1591 aa23.92■■□□□ 1.42
GABBR1-204ENST00000377016 RALBP1Q15311 655 aa23.91■■□□□ 1.42
GABBR1-204ENST00000377016 CASKIN1Q8WXD9 1431 aa23.91■■□□□ 1.42
GABBR1-204ENST00000377016 CCDC7Q96M83 1385 aa23.89■■□□□ 1.41
GABBR1-204ENST00000377016 CDCA8Q53HL2 280 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms