RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 LAS1LQ9Y4W2 734 aaKnown RBP26.2■■□□□ 1.78
COL15A1-201ENST00000375001 CDK11BP21127 795 aaKnown RBP26.2■■□□□ 1.78
COL15A1-201ENST00000375001 WDR43Q15061 677 aaKnown RBP eCLIP26.16■■□□□ 1.78
COL15A1-201ENST00000375001 CCDC180Q9P1Z9 1646 aa26.13■■□□□ 1.77
COL15A1-201ENST00000375001 CLIP1P30622 1438 aa26.13■■□□□ 1.77
COL15A1-201ENST00000375001 NOP58Q9Y2X3 529 aaKnown RBP26.08■■□□□ 1.77
COL15A1-201ENST00000375001 AMER1Q5JTC6 1135 aaPredicted RBP26.06■■□□□ 1.76
COL15A1-201ENST00000375001 CEP162Q5TB80 1403 aa26.06■■□□□ 1.76
COL15A1-201ENST00000375001 MYH16Q9H6N6 1097 aa26.05■■□□□ 1.76
COL15A1-201ENST00000375001 DEKP35659 375 aaKnown RBP26.03■■□□□ 1.76
COL15A1-201ENST00000375001 SUPT16HQ9Y5B9 1047 aaKnown RBP26.03■■□□□ 1.76
COL15A1-201ENST00000375001 TPRNQ4KMQ1 711 aa26.01■■□□□ 1.75
COL15A1-201ENST00000375001 CHGAP10645 457 aaKnown RBP25.97■■□□□ 1.75
COL15A1-201ENST00000375001 KDM2AQ9Y2K7 1162 aa25.95■■□□□ 1.75
COL15A1-201ENST00000375001 SENP3-EIF4A1A0A087X0R7 540 aa25.95■■□□□ 1.74
COL15A1-201ENST00000375001 EIF4G2P78344 907 aaKnown RBP eCLIP25.94■■□□□ 1.74
COL15A1-201ENST00000375001 RSF1Q96T23 1441 aaPredicted RBP25.92■■□□□ 1.74
COL15A1-201ENST00000375001 MTUS2Q5JR59 1369 aa25.91■■□□□ 1.74
COL15A1-201ENST00000375001 PLCB2Q00722 1185 aa25.9■■□□□ 1.74
COL15A1-201ENST00000375001 ARID4BQ4LE39 1312 aaPredicted RBP25.9■■□□□ 1.74
COL15A1-201ENST00000375001 ZRSR1Q15695 479 aaKnown RBP25.89■■□□□ 1.74
COL15A1-201ENST00000375001 GOLGA3Q08378 1498 aa25.87■■□□□ 1.73
COL15A1-201ENST00000375001 RRP7BPQ9NSQ0 103 aa25.87■■□□□ 1.73
COL15A1-201ENST00000375001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.86■■□□□ 1.73
COL15A1-201ENST00000375001 PPP4R2Q9NY27 417 aa25.84■■□□□ 1.73
COL15A1-201ENST00000375001 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.82■■□□□ 1.72
COL15A1-201ENST00000375001 RGS3P49796 1198 aa25.79■■□□□ 1.72
COL15A1-201ENST00000375001 EEA1Q15075 1411 aa25.78■■□□□ 1.72
COL15A1-201ENST00000375001 TNIKQ9UKE5 1360 aa25.76■■□□□ 1.71
COL15A1-201ENST00000375001 SIN3AQ96ST3 1273 aa25.73■■□□□ 1.71
COL15A1-201ENST00000375001 STAG3Q9UJ98 1225 aa25.73■■□□□ 1.71
COL15A1-201ENST00000375001 B4GALNT3Q6L9W6 998 aa25.72■■□□□ 1.71
COL15A1-201ENST00000375001 MSNP26038 577 aaKnown RBP25.71■■□□□ 1.71
COL15A1-201ENST00000375001 RBM19Q9Y4C8 960 aaKnown RBP25.71■■□□□ 1.71
COL15A1-201ENST00000375001 TSPY4P0CV99 314 aa25.7■■□□□ 1.7
COL15A1-201ENST00000375001 TSPY10P0CW01 314 aa25.7■■□□□ 1.7
COL15A1-201ENST00000375001 L1TD1Q5T7N2 865 aaKnown RBP25.69■■□□□ 1.7
COL15A1-201ENST00000375001 CHAF1AQ13111 956 aaPredicted RBP25.67■■□□□ 1.7
COL15A1-201ENST00000375001 CASC1Q6TDU7 716 aa25.67■■□□□ 1.7
COL15A1-201ENST00000375001 HSP90AB1P08238 724 aaKnown RBP25.65■■□□□ 1.7
COL15A1-201ENST00000375001 ARID3AQ99856 593 aa25.65■■□□□ 1.7
COL15A1-201ENST00000375001 WRNQ14191 1432 aaPredicted RBP eCLIP25.62■■□□□ 1.69
COL15A1-201ENST00000375001 GOLGA6L6A8MZA4 724 aa25.6■■□□□ 1.69
COL15A1-201ENST00000375001 FTSJ3Q8IY81 847 aaKnown RBP25.6■■□□□ 1.69
COL15A1-201ENST00000375001 ESF1Q9H501 851 aaKnown RBP25.57■■□□□ 1.68
COL15A1-201ENST00000375001 ZBTB7CA1YPR0 619 aa25.55■■□□□ 1.68
COL15A1-201ENST00000375001 NRDCO43847 1150 aa25.55■■□□□ 1.68
COL15A1-201ENST00000375001 CEP164Q9UPV0 1460 aa25.55■■□□□ 1.68
COL15A1-201ENST00000375001 PNNQ9H307 717 aaKnown RBP25.55■■□□□ 1.68
COL15A1-201ENST00000375001 SPRYD3Q8NCJ5 442 aa25.53■■□□□ 1.68
COL15A1-201ENST00000375001 RGL3Q3MIN7 710 aa25.51■■□□□ 1.67
COL15A1-201ENST00000375001 TULP1O00294 542 aaPredicted RBP25.5■■□□□ 1.67
COL15A1-201ENST00000375001 FRAT1Q92837 279 aaPredicted RBP25.48■■□□□ 1.67
COL15A1-201ENST00000375001 TAOK2Q9UL54 1235 aa25.48■■□□□ 1.67
COL15A1-201ENST00000375001 HSCBQ8IWL3 235 aa25.48■■□□□ 1.67
COL15A1-201ENST00000375001 NEUROD2Q15784 382 aa25.47■■□□□ 1.67
COL15A1-201ENST00000375001 TNNT3P45378 269 aaPredicted RBP25.46■■□□□ 1.67
COL15A1-201ENST00000375001 PLPPR3Q6T4P5 718 aa25.45■■□□□ 1.66
COL15A1-201ENST00000375001 CARD11Q9BXL7 1154 aa25.43■■□□□ 1.66
COL15A1-201ENST00000375001 DRC7Q8IY82 874 aa25.43■■□□□ 1.66
COL15A1-201ENST00000375001 GOLGA6L4A6NEF3 574 aa25.41■■□□□ 1.66
COL15A1-201ENST00000375001 GZF1Q9H116 711 aaPredicted RBP25.41■■□□□ 1.66
COL15A1-201ENST00000375001 RB1CC1Q8TDY2 1594 aa25.4■■□□□ 1.66
COL15A1-201ENST00000375001 CCNB3Q8WWL7 1395 aa25.39■■□□□ 1.66
COL15A1-201ENST00000375001 CFAP53Q96M91 514 aa25.38■■□□□ 1.65
COL15A1-201ENST00000375001 SOGA1O94964 1423 aa25.38■■□□□ 1.65
COL15A1-201ENST00000375001 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
COL15A1-201ENST00000375001 KIF27Q86VH2 1401 aa25.36■■□□□ 1.65
COL15A1-201ENST00000375001 KNSTRNQ9Y448 316 aa25.36■■□□□ 1.65
COL15A1-201ENST00000375001 A0A0G2JS52 829 aa25.35■■□□□ 1.65
COL15A1-201ENST00000375001 FGD1P98174 961 aa25.34■■□□□ 1.65
COL15A1-201ENST00000375001 TSHZ2Q9NRE2 1034 aa25.33■■□□□ 1.65
COL15A1-201ENST00000375001 CHMP7Q8WUX9 453 aaPredicted RBP25.33■■□□□ 1.65
COL15A1-201ENST00000375001 CCER2I3L3R5 266 aa25.33■■□□□ 1.65
COL15A1-201ENST00000375001 KIAA2012Q0VF49 1180 aa25.32■■□□□ 1.64
COL15A1-201ENST00000375001 PLEKHG5O94827 1062 aa25.3■■□□□ 1.64
COL15A1-201ENST00000375001 CFDP1Q9UEE9 299 aaPredicted RBP25.29■■□□□ 1.64
COL15A1-201ENST00000375001 NAP1L2Q9ULW6 460 aaPredicted RBP25.28■■□□□ 1.64
COL15A1-201ENST00000375001 SLKQ9H2G2 1235 aaPredicted RBP25.28■■□□□ 1.64
COL15A1-201ENST00000375001 KCNJ4P48050 445 aa25.28■■□□□ 1.64
COL15A1-201ENST00000375001 VSIG10Q8N0Z9 540 aa25.28■■□□□ 1.64
COL15A1-201ENST00000375001 NPM1P06748 294 aaKnown RBP eCLIP25.27■■□□□ 1.64
COL15A1-201ENST00000375001 HSP90AA2PQ14568 343 aaPredicted RBP25.27■■□□□ 1.64
COL15A1-201ENST00000375001 PLEKHD1A6NEE1 506 aa25.26■■□□□ 1.63
COL15A1-201ENST00000375001 CC2D1BQ5T0F9 858 aaKnown RBP25.24■■□□□ 1.63
COL15A1-201ENST00000375001 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
COL15A1-201ENST00000375001 KCNH8Q96L42 1107 aa25.23■■□□□ 1.63
COL15A1-201ENST00000375001 MAPK8IP3Q9UPT6 1336 aa25.23■■□□□ 1.63
COL15A1-201ENST00000375001 GOLGA6L3A6NEY3 463 aa25.22■■□□□ 1.63
COL15A1-201ENST00000375001 GBP4Q96PP9 640 aa25.22■■□□□ 1.63
COL15A1-201ENST00000375001 TIMELESSQ9UNS1 1208 aa25.22■■□□□ 1.63
COL15A1-201ENST00000375001 C14orf37Q86TY3 774 aa25.21■■□□□ 1.63
COL15A1-201ENST00000375001 KANK4Q5T7N3 995 aaPredicted RBP25.2■■□□□ 1.63
COL15A1-201ENST00000375001 CDCA8Q53HL2 280 aa25.2■■□□□ 1.62
COL15A1-201ENST00000375001 BAZ1BQ9UIG0 1483 aaKnown RBP25.19■■□□□ 1.62
COL15A1-201ENST00000375001 CHMP4BQ9H444 224 aaKnown RBP25.19■■□□□ 1.62
COL15A1-201ENST00000375001 MS4A1P11836 297 aa25.19■■□□□ 1.62
COL15A1-201ENST00000375001 HSPA5P11021 654 aaKnown RBP25.19■■□□□ 1.62
COL15A1-201ENST00000375001 OS9Q13438 667 aaPredicted RBP25.17■■□□□ 1.62
COL15A1-201ENST00000375001 VPS8Q8N3P4 1428 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms