RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 PKNOX2Q96KN3 472 aa9.2□□□□□ -0.94
CSMD2-206ENST00000373388 SETQ01105 290 aaPredicted RBP9.19□□□□□ -0.94
CSMD2-206ENST00000373388 PODXL2Q9NZ53 605 aa9.18□□□□□ -0.94
CSMD2-206ENST00000373388 GOLGA6L3A6NEY3 463 aa9.17□□□□□ -0.94
CSMD2-206ENST00000373388 MYH16Q9H6N6 1097 aa9.16□□□□□ -0.94
CSMD2-206ENST00000373388 PRKCSHP14314 528 aaPredicted RBP9.15□□□□□ -0.94
CSMD2-206ENST00000373388 MTERF4Q7Z6M4 381 aaKnown RBP9.15□□□□□ -0.95
CSMD2-206ENST00000373388 KIAA2012Q0VF49 1180 aa9.14□□□□□ -0.95
CSMD2-206ENST00000373388 APPP05067 770 aa9.14□□□□□ -0.95
CSMD2-206ENST00000373388 VSIG10Q8N0Z9 540 aa9.14□□□□□ -0.95
CSMD2-206ENST00000373388 GOLGA6L1Q8N7Z2 621 aa9.14□□□□□ -0.95
CSMD2-206ENST00000373388 AMER1Q5JTC6 1135 aaPredicted RBP9.12□□□□□ -0.95
CSMD2-206ENST00000373388 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.11□□□□□ -0.95
CSMD2-206ENST00000373388 CASC1Q6TDU7 716 aa9.11□□□□□ -0.95
CSMD2-206ENST00000373388 PPP4R2Q9NY27 417 aa9.1□□□□□ -0.95
CSMD2-206ENST00000373388 TONSLQ96HA7 1378 aa9.1□□□□□ -0.95
CSMD2-206ENST00000373388 CSRNP3Q8WYN3 585 aa9.1□□□□□ -0.95
CSMD2-206ENST00000373388 MAP7D2Q96T17 732 aa9.1□□□□□ -0.95
CSMD2-206ENST00000373388 ARID3CA6NKF2 412 aa9.07□□□□□ -0.96
CSMD2-206ENST00000373388 TAF3Q5VWG9 929 aa9.06□□□□□ -0.96
CSMD2-206ENST00000373388 SUPT16HQ9Y5B9 1047 aaKnown RBP9.06□□□□□ -0.96
CSMD2-206ENST00000373388 NOM1Q5C9Z4 860 aaKnown RBP9.06□□□□□ -0.96
CSMD2-206ENST00000373388 CFAP44Q96MT7 982 aa9.04□□□□□ -0.96
CSMD2-206ENST00000373388 SYAP1Q96A49 352 aaPredicted RBP9.04□□□□□ -0.96
CSMD2-206ENST00000373388 GBP4Q96PP9 640 aa9.04□□□□□ -0.96
CSMD2-206ENST00000373388 GOLGA6L4A6NEF3 574 aa9.04□□□□□ -0.96
CSMD2-206ENST00000373388 RBM19Q9Y4C8 960 aaKnown RBP9.03□□□□□ -0.96
CSMD2-206ENST00000373388 TMC1Q8TDI8 760 aa9.03□□□□□ -0.96
CSMD2-206ENST00000373388 MRS2Q9HD23 443 aa9.02□□□□□ -0.96
CSMD2-206ENST00000373388 HSCBQ8IWL3 235 aa9.02□□□□□ -0.97
CSMD2-206ENST00000373388 GPS2Q13227 327 aa9.01□□□□□ -0.97
CSMD2-206ENST00000373388 P3H3Q8IVL6 736 aa9.01□□□□□ -0.97
CSMD2-206ENST00000373388 CHMP4BQ9H444 224 aaKnown RBP9.01□□□□□ -0.97
CSMD2-206ENST00000373388 IRX6P78412 446 aaPredicted RBP9.01□□□□□ -0.97
CSMD2-206ENST00000373388 TEX35Q5T0J7 233 aa9.01□□□□□ -0.97
CSMD2-206ENST00000373388 CCDC66A2RUB6 948 aa9.01□□□□□ -0.97
CSMD2-206ENST00000373388 SALL2Q9Y467 1007 aaPredicted RBP9.01□□□□□ -0.97
CSMD2-206ENST00000373388 HTATSF1O43719 755 aaKnown RBP9.01□□□□□ -0.97
CSMD2-206ENST00000373388 PABPN1Q86U42 306 aaKnown RBP eCLIP9□□□□□ -0.97
CSMD2-206ENST00000373388 MIER1Q8N108 512 aa9□□□□□ -0.97
CSMD2-206ENST00000373388 FAM9BQ8IZU0 186 aa9□□□□□ -0.97
CSMD2-206ENST00000373388 PHF14O94880 888 aa8.99□□□□□ -0.97
CSMD2-206ENST00000373388 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.98□□□□□ -0.97
CSMD2-206ENST00000373388 HMGB1P09429 215 aaKnown RBP8.98□□□□□ -0.97
CSMD2-206ENST00000373388 WDR43Q15061 677 aaKnown RBP eCLIP8.98□□□□□ -0.97
CSMD2-206ENST00000373388 CWC15Q9P013 229 aaKnown RBP8.97□□□□□ -0.97
CSMD2-206ENST00000373388 DDX10Q13206 875 aaKnown RBP8.97□□□□□ -0.97
CSMD2-206ENST00000373388 CSPP1Q1MSJ5 1256 aa8.97□□□□□ -0.97
CSMD2-206ENST00000373388 HSP90AB1P08238 724 aaKnown RBP8.96□□□□□ -0.97
CSMD2-206ENST00000373388 ZNF771Q7L3S4 317 aaPredicted RBP8.96□□□□□ -0.98
CSMD2-206ENST00000373388 DRC7Q8IY82 874 aa8.95□□□□□ -0.98
CSMD2-206ENST00000373388 IPO9Q96P70 1041 aaKnown RBP8.95□□□□□ -0.98
CSMD2-206ENST00000373388 RRP9O43818 475 aaKnown RBP8.94□□□□□ -0.98
CSMD2-206ENST00000373388 DDX11L8A8MPP1 907 aa8.93□□□□□ -0.98
CSMD2-206ENST00000373388 MS4A1P11836 297 aa8.93□□□□□ -0.98
CSMD2-206ENST00000373388 STK11IPQ8N1F8 1099 aa8.93□□□□□ -0.98
CSMD2-206ENST00000373388 FBLN2P98095 1184 aa8.93□□□□□ -0.98
CSMD2-206ENST00000373388 PLCB2Q00722 1185 aa8.93□□□□□ -0.98
CSMD2-206ENST00000373388 NOC3LQ8WTT2 800 aaKnown RBP8.93□□□□□ -0.98
CSMD2-206ENST00000373388 TSPYL1Q9H0U9 437 aa8.92□□□□□ -0.98
CSMD2-206ENST00000373388 FANCIQ9NVI1 1328 aa8.92□□□□□ -0.98
CSMD2-206ENST00000373388 TPM2P07951 284 aa8.91□□□□□ -0.98
CSMD2-206ENST00000373388 ZNF777Q9ULD5 760 aaPredicted RBP8.91□□□□□ -0.98
CSMD2-206ENST00000373388 SENP3-EIF4A1A0A087X0R7 540 aa8.91□□□□□ -0.98
CSMD2-206ENST00000373388 HIRIP3Q9BW71 556 aaPredicted RBP8.91□□□□□ -0.98
CSMD2-206ENST00000373388 ABCC9O60706 1549 aa8.9□□□□□ -0.98
CSMD2-206ENST00000373388 TCERG1O14776 1098 aaKnown RBP8.9□□□□□ -0.98
CSMD2-206ENST00000373388 GSE1Q14687 1217 aa8.9□□□□□ -0.98
CSMD2-206ENST00000373388 NEFHP12036 1026 aa8.9□□□□□ -0.99
CSMD2-206ENST00000373388 CALD1Q05682 793 aaKnown RBP8.89□□□□□ -0.99
CSMD2-206ENST00000373388 ARID3AQ99856 593 aa8.89□□□□□ -0.99
CSMD2-206ENST00000373388 SKOR2Q2VWA4 1001 aaPredicted RBP8.88□□□□□ -0.99
CSMD2-206ENST00000373388 UBE2Q2Q8WVN8 375 aa8.88□□□□□ -0.99
CSMD2-206ENST00000373388 MCCP23508 829 aa8.88□□□□□ -0.99
CSMD2-206ENST00000373388 TPM4P67936 248 aa8.87□□□□□ -0.99
CSMD2-206ENST00000373388 FTSJ3Q8IY81 847 aaKnown RBP8.87□□□□□ -0.99
CSMD2-206ENST00000373388 HMMRO75330 724 aa8.86□□□□□ -0.99
CSMD2-206ENST00000373388 PDE4CQ08493 712 aa8.86□□□□□ -0.99
CSMD2-206ENST00000373388 CCDC34Q96HJ3 373 aa8.86□□□□□ -0.99
CSMD2-206ENST00000373388 TSHZ2Q9NRE2 1034 aa8.86□□□□□ -0.99
CSMD2-206ENST00000373388 RDXP35241 583 aaKnown RBP8.86□□□□□ -0.99
CSMD2-206ENST00000373388 FAM43AQ8N2R8 423 aa8.85□□□□□ -0.99
CSMD2-206ENST00000373388 CCDC70Q6NSX1 233 aa8.85□□□□□ -0.99
CSMD2-206ENST00000373388 ACBD3Q9H3P7 528 aa8.85□□□□□ -0.99
CSMD2-206ENST00000373388 HMGN5P82970 282 aaKnown RBP8.85□□□□□ -0.99
CSMD2-206ENST00000373388 USP8P40818 1118 aa8.84□□□□□ -0.99
CSMD2-206ENST00000373388 ARGLU1Q9NWB6 273 aaPredicted RBP8.84□□□□□ -0.99
CSMD2-206ENST00000373388 EEA1Q15075 1411 aa8.84□□□□□ -0.99
CSMD2-206ENST00000373388 PLPPR3Q6T4P5 718 aa8.84□□□□□ -0.99
CSMD2-206ENST00000373388 CCDC191Q8NCU4 936 aa8.84□□□□□ -0.99
CSMD2-206ENST00000373388 CCER2I3L3R5 266 aa8.83□□□□□ -1
CSMD2-206ENST00000373388 RRP12Q5JTH9 1297 aaKnown RBP8.83□□□□□ -1
CSMD2-206ENST00000373388 SENP3Q9H4L4 574 aaPredicted RBP8.82□□□□□ -1
CSMD2-206ENST00000373388 FAM13BQ9NYF5 915 aa8.82□□□□□ -1
CSMD2-206ENST00000373388 CHGAP10645 457 aaKnown RBP8.82□□□□□ -1
CSMD2-206ENST00000373388 EIF4G2P78344 907 aaKnown RBP eCLIP8.81□□□□□ -1
CSMD2-206ENST00000373388 KIF16BQ96L93 1317 aa8.81□□□□□ -1
CSMD2-206ENST00000373388 DCTN1Q14203 1278 aa8.81□□□□□ -1
CSMD2-206ENST00000373388 RGS3P49796 1198 aa8.81□□□□□ -1
CSMD2-206ENST00000373388 TPRNQ4KMQ1 711 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms