RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 MYT1Q01538 1121 aa12.11□□□□□ -0.47
CSMD2-206ENST00000373388 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
CSMD2-206ENST00000373388 CCER1Q8TC90 406 aaPredicted RBP11.24□□□□□ -0.61
CSMD2-206ENST00000373388 TTBK1Q5TCY1 1321 aaPredicted RBP11.22□□□□□ -0.61
CSMD2-206ENST00000373388 DCAF8L2P0C7V8 631 aa11.18□□□□□ -0.62
CSMD2-206ENST00000373388 ERICH6Q7L0X2 663 aa11.13□□□□□ -0.63
CSMD2-206ENST00000373388 CENPBP07199 599 aaPredicted RBP11.12□□□□□ -0.63
CSMD2-206ENST00000373388 YTHDC1Q96MU7 727 aaKnown RBP11.08□□□□□ -0.64
CSMD2-206ENST00000373388 ZEB1P37275 1124 aaPredicted RBP10.88□□□□□ -0.67
CSMD2-206ENST00000373388 SUPT5HO00267 1087 aaKnown RBP10.78□□□□□ -0.68
CSMD2-206ENST00000373388 EHMT2Q96KQ7 1210 aa10.73□□□□□ -0.69
CSMD2-206ENST00000373388 NEFLP07196 543 aa10.72□□□□□ -0.69
CSMD2-206ENST00000373388 SHROOM4Q9ULL8 1493 aa10.59□□□□□ -0.71
CSMD2-206ENST00000373388 DAXXQ9UER7 740 aaPredicted RBP10.52□□□□□ -0.73
CSMD2-206ENST00000373388 RTL5Q5HYW3 569 aaPredicted RBP10.51□□□□□ -0.73
CSMD2-206ENST00000373388 GLIPR1L2Q4G1C9 344 aa10.48□□□□□ -0.73
CSMD2-206ENST00000373388 PCGF6Q9BYE7 350 aa10.47□□□□□ -0.73
CSMD2-206ENST00000373388 APLP2Q06481 763 aa10.44□□□□□ -0.74
CSMD2-206ENST00000373388 MYT1LQ9UL68 1186 aa10.37□□□□□ -0.75
CSMD2-206ENST00000373388 HRCP23327 699 aa10.28□□□□□ -0.76
CSMD2-206ENST00000373388 FAM9AQ8IZU1 332 aaPredicted RBP10.25□□□□□ -0.77
CSMD2-206ENST00000373388 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
CSMD2-206ENST00000373388 CLSPNQ9HAW4 1339 aa10.2□□□□□ -0.78
CSMD2-206ENST00000373388 NISCHQ9Y2I1 1504 aa10.17□□□□□ -0.78
CSMD2-206ENST00000373388 RANGAP1P46060 587 aaPredicted RBP10.15□□□□□ -0.79
CSMD2-206ENST00000373388 TRIM26Q12899 539 aaPredicted RBP10.07□□□□□ -0.8
CSMD2-206ENST00000373388 EIF5BO60841 1220 aaKnown RBP10.06□□□□□ -0.8
CSMD2-206ENST00000373388 ANP32BQ92688 251 aaKnown RBP9.96□□□□□ -0.81
CSMD2-206ENST00000373388 CDK11AQ9UQ88 783 aaPredicted RBP9.96□□□□□ -0.81
CSMD2-206ENST00000373388 PPARGC1BQ86YN6 1023 aaKnown RBP9.96□□□□□ -0.82
CSMD2-206ENST00000373388 ANP32AP39687 249 aaKnown RBP9.95□□□□□ -0.82
CSMD2-206ENST00000373388 GTF3C3Q9Y5Q9 886 aa9.94□□□□□ -0.82
CSMD2-206ENST00000373388 DIEXFQ68CQ4 756 aaKnown RBP9.93□□□□□ -0.82
CSMD2-206ENST00000373388 TNNT2P45379 298 aaPredicted RBP9.92□□□□□ -0.82
CSMD2-206ENST00000373388 ATP1B4Q9UN42 357 aaPredicted RBP9.92□□□□□ -0.82
CSMD2-206ENST00000373388 NCLP19338 710 aaKnown RBP9.85□□□□□ -0.83
CSMD2-206ENST00000373388 ACIN1Q9UKV3 1341 aaKnown RBP9.85□□□□□ -0.83
CSMD2-206ENST00000373388 TRIM41Q8WV44 630 aa9.84□□□□□ -0.83
CSMD2-206ENST00000373388 UBTFP17480 764 aaKnown RBP9.81□□□□□ -0.84
CSMD2-206ENST00000373388 TRIM44Q96DX7 344 aaPredicted RBP9.79□□□□□ -0.84
CSMD2-206ENST00000373388 CDK11BP21127 795 aaKnown RBP9.75□□□□□ -0.85
CSMD2-206ENST00000373388 ANP32EQ9BTT0 268 aa9.73□□□□□ -0.85
CSMD2-206ENST00000373388 CNGB1Q14028 1251 aaPredicted RBP9.71□□□□□ -0.85
CSMD2-206ENST00000373388 POLR3GLQ9BT43 218 aa9.7□□□□□ -0.86
CSMD2-206ENST00000373388 ERICH6BQ5W0A0 696 aa9.7□□□□□ -0.86
CSMD2-206ENST00000373388 BCL11AQ9H165 835 aa9.68□□□□□ -0.86
CSMD2-206ENST00000373388 ITGAEP38570 1179 aa9.67□□□□□ -0.86
CSMD2-206ENST00000373388 ZBTB47Q9UFB7 747 aaPredicted RBP9.62□□□□□ -0.87
CSMD2-206ENST00000373388 UPF2Q9HAU5 1272 aaKnown RBP9.62□□□□□ -0.87
CSMD2-206ENST00000373388 BCANQ96GW7 911 aa9.62□□□□□ -0.87
CSMD2-206ENST00000373388 LOC105371045A0A1W2PR82 267 aa9.62□□□□□ -0.87
CSMD2-206ENST00000373388 ANP32CO43423 234 aa9.61□□□□□ -0.87
CSMD2-206ENST00000373388 SLC24A1O60721 1099 aa9.59□□□□□ -0.87
CSMD2-206ENST00000373388 HNRNPUL2Q1KMD3 747 aaKnown RBP9.58□□□□□ -0.88
CSMD2-206ENST00000373388 HSP90AA1P07900 732 aaKnown RBP9.57□□□□□ -0.88
CSMD2-206ENST00000373388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.54□□□□□ -0.88
CSMD2-206ENST00000373388 ZNF326Q5BKZ1 582 aaKnown RBP9.53□□□□□ -0.88
CSMD2-206ENST00000373388 NEFMP07197 916 aa9.53□□□□□ -0.88
CSMD2-206ENST00000373388 NBR1Q14596 966 aa9.53□□□□□ -0.88
CSMD2-206ENST00000373388 PTMSP20962 102 aa9.52□□□□□ -0.88
CSMD2-206ENST00000373388 DDRGK1Q96HY6 314 aa9.51□□□□□ -0.89
CSMD2-206ENST00000373388 CHIC1Q5VXU3 224 aa9.48□□□□□ -0.89
CSMD2-206ENST00000373388 NAP1L5Q96NT1 182 aaPredicted RBP9.47□□□□□ -0.89
CSMD2-206ENST00000373388 SCAF1Q9H7N4 1312 aaKnown RBP9.47□□□□□ -0.89
CSMD2-206ENST00000373388 CANXP27824 592 aaKnown RBP9.46□□□□□ -0.9
CSMD2-206ENST00000373388 BECN1Q14457 450 aa9.45□□□□□ -0.9
CSMD2-206ENST00000373388 PPM1GO15355 546 aaPredicted RBP9.45□□□□□ -0.9
CSMD2-206ENST00000373388 NPM2Q86SE8 214 aaKnown RBP9.45□□□□□ -0.9
CSMD2-206ENST00000373388 GOLGA6L22H0YM25 854 aa9.44□□□□□ -0.9
CSMD2-206ENST00000373388 SLC4A1APQ9BWU0 796 aaKnown RBP9.44□□□□□ -0.9
CSMD2-206ENST00000373388 FKBP8Q14318 412 aa9.41□□□□□ -0.9
CSMD2-206ENST00000373388 CHAF1AQ13111 956 aaPredicted RBP9.4□□□□□ -0.9
CSMD2-206ENST00000373388 L1TD1Q5T7N2 865 aaKnown RBP9.37□□□□□ -0.91
CSMD2-206ENST00000373388 CCDC136Q96JN2 1154 aa9.37□□□□□ -0.91
CSMD2-206ENST00000373388 RSPH6AQ9H0K4 717 aa9.37□□□□□ -0.91
CSMD2-206ENST00000373388 ARID4BQ4LE39 1312 aaPredicted RBP9.36□□□□□ -0.91
CSMD2-206ENST00000373388 NEUROD1Q13562 356 aa9.36□□□□□ -0.91
CSMD2-206ENST00000373388 DCAF1Q9Y4B6 1507 aa9.36□□□□□ -0.91
CSMD2-206ENST00000373388 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.35□□□□□ -0.91
CSMD2-206ENST00000373388 TNNT3P45378 269 aaPredicted RBP9.34□□□□□ -0.91
CSMD2-206ENST00000373388 PTMAP06454 111 aaKnown RBP9.33□□□□□ -0.92
CSMD2-206ENST00000373388 DNTTIP2Q5QJE6 756 aaKnown RBP9.33□□□□□ -0.92
CSMD2-206ENST00000373388 CALRP27797 417 aaKnown RBP9.32□□□□□ -0.92
CSMD2-206ENST00000373388 NRDCO43847 1150 aa9.32□□□□□ -0.92
CSMD2-206ENST00000373388 NOP58Q9Y2X3 529 aaKnown RBP9.32□□□□□ -0.92
CSMD2-206ENST00000373388 CCDC180Q9P1Z9 1646 aa9.32□□□□□ -0.92
CSMD2-206ENST00000373388 GOLGA6L6A8MZA4 724 aa9.3□□□□□ -0.92
CSMD2-206ENST00000373388 FAM50AQ14320 339 aaKnown RBP9.3□□□□□ -0.92
CSMD2-206ENST00000373388 DEKP35659 375 aaKnown RBP9.3□□□□□ -0.92
CSMD2-206ENST00000373388 MSNP26038 577 aaKnown RBP9.28□□□□□ -0.92
CSMD2-206ENST00000373388 HSP90AA2PQ14568 343 aaPredicted RBP9.28□□□□□ -0.92
CSMD2-206ENST00000373388 ARXQ96QS3 562 aa9.27□□□□□ -0.93
CSMD2-206ENST00000373388 PNNQ9H307 717 aaKnown RBP9.26□□□□□ -0.93
CSMD2-206ENST00000373388 LAS1LQ9Y4W2 734 aaKnown RBP9.26□□□□□ -0.93
CSMD2-206ENST00000373388 A0A0U1RQG5 324 aaPredicted RBP9.25□□□□□ -0.93
CSMD2-206ENST00000373388 RTN4Q9NQC3 1192 aaKnown RBP9.24□□□□□ -0.93
CSMD2-206ENST00000373388 TRIM52Q96A61 297 aa9.24□□□□□ -0.93
CSMD2-206ENST00000373388 USP35Q9P2H5 1018 aa9.22□□□□□ -0.93
CSMD2-206ENST00000373388 HNRNPUQ00839 825 aaKnown RBP eCLIP9.22□□□□□ -0.93
CSMD2-206ENST00000373388 ZRSR1Q15695 479 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms