RNA–Protein interactions for RNA: ENST00000371835.8

BRD4-203, Transcript of bromodomain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD4, Length 4,624 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-203ENST00000371835 CADPSQ9ULU8 1353 aa15.99■□□□□ 0.15
BRD4-203ENST00000371835 RUSC2Q8N2Y8 1516 aa15.98■□□□□ 0.15
BRD4-203ENST00000371835 PEG3Q9GZU2 1588 aa15.98■□□□□ 0.15
BRD4-203ENST00000371835 KANK4Q5T7N3 995 aaPredicted RBP15.96■□□□□ 0.15
BRD4-203ENST00000371835 FAM9BQ8IZU0 186 aa15.96■□□□□ 0.15
BRD4-203ENST00000371835 SIN3AQ96ST3 1273 aa15.95■□□□□ 0.14
BRD4-203ENST00000371835 PDS5BQ9NTI5 1447 aa15.95■□□□□ 0.14
BRD4-203ENST00000371835 IRX6P78412 446 aaPredicted RBP15.95■□□□□ 0.14
BRD4-203ENST00000371835 SETD5Q9C0A6 1442 aa15.93■□□□□ 0.14
BRD4-203ENST00000371835 MRS2Q9HD23 443 aa15.93■□□□□ 0.14
BRD4-203ENST00000371835 PPP4R2Q9NY27 417 aa15.93■□□□□ 0.14
BRD4-203ENST00000371835 EIF4G2P78344 907 aaKnown RBP eCLIP15.92■□□□□ 0.14
BRD4-203ENST00000371835 CCDC136Q96JN2 1154 aa15.91■□□□□ 0.14
BRD4-203ENST00000371835 ERICH6BQ5W0A0 696 aa15.9■□□□□ 0.14
BRD4-203ENST00000371835 ZBTB47Q9UFB7 747 aaPredicted RBP15.9■□□□□ 0.14
BRD4-203ENST00000371835 RAB3GAP2Q9H2M9 1393 aa15.9■□□□□ 0.14
BRD4-203ENST00000371835 RAPGEF2Q9Y4G8 1499 aa15.89■□□□□ 0.13
BRD4-203ENST00000371835 CC2D2AQ9P2K1 1620 aa15.89■□□□□ 0.13
BRD4-203ENST00000371835 MTUS2Q5JR59 1369 aa15.87■□□□□ 0.13
BRD4-203ENST00000371835 NBR1Q14596 966 aa15.86■□□□□ 0.13
BRD4-203ENST00000371835 ZNF326Q5BKZ1 582 aaKnown RBP15.85■□□□□ 0.13
BRD4-203ENST00000371835 FHAD1B1AJZ9 1412 aa15.85■□□□□ 0.13
BRD4-203ENST00000371835 ERCC6Q03468 1493 aa15.83■□□□□ 0.12
BRD4-203ENST00000371835 PPP1R15AO75807 674 aaPredicted RBP15.82■□□□□ 0.12
BRD4-203ENST00000371835 NPM2Q86SE8 214 aaKnown RBP15.81■□□□□ 0.12
BRD4-203ENST00000371835 KCNH8Q96L42 1107 aa15.8■□□□□ 0.12
BRD4-203ENST00000371835 KIF21BO75037 1637 aa15.78■□□□□ 0.12
BRD4-203ENST00000371835 CFTRP13569 1480 aa15.78■□□□□ 0.12
BRD4-203ENST00000371835 NOP58Q9Y2X3 529 aaKnown RBP15.77■□□□□ 0.12
BRD4-203ENST00000371835 FANCD2Q9BXW9 1451 aa15.76■□□□□ 0.11
BRD4-203ENST00000371835 TMC1Q8TDI8 760 aa15.76■□□□□ 0.11
BRD4-203ENST00000371835 CHIC2Q9UKJ5 165 aa15.75■□□□□ 0.11
BRD4-203ENST00000371835 CUX2O14529 1486 aa15.73■□□□□ 0.11
BRD4-203ENST00000371835 FANCIQ9NVI1 1328 aa15.72■□□□□ 0.11
BRD4-203ENST00000371835 CARMIL1Q5VZK9 1371 aa15.71■□□□□ 0.11
BRD4-203ENST00000371835 DEKP35659 375 aaKnown RBP15.71■□□□□ 0.11
BRD4-203ENST00000371835 B4GALNT3Q6L9W6 998 aa15.71■□□□□ 0.11
BRD4-203ENST00000371835 FBLN2P98095 1184 aa15.71■□□□□ 0.11
BRD4-203ENST00000371835 RRP7BPQ9NSQ0 103 aa15.7■□□□□ 0.1
BRD4-203ENST00000371835 ARHGAP35Q9NRY4 1499 aa15.69■□□□□ 0.1
BRD4-203ENST00000371835 RRBP1Q9P2E9 1410 aaKnown RBP15.68■□□□□ 0.1
BRD4-203ENST00000371835 HSPA5P11021 654 aaKnown RBP15.64■□□□□ 0.09
BRD4-203ENST00000371835 PPM1GO15355 546 aaPredicted RBP15.63■□□□□ 0.09
BRD4-203ENST00000371835 DDRGK1Q96HY6 314 aa15.62■□□□□ 0.09
BRD4-203ENST00000371835 SLC4A1APQ9BWU0 796 aaKnown RBP15.62■□□□□ 0.09
BRD4-203ENST00000371835 ARID3CA6NKF2 412 aa15.61■□□□□ 0.09
BRD4-203ENST00000371835 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
BRD4-203ENST00000371835 ERICH3Q5RHP9 1530 aa15.6■□□□□ 0.09
BRD4-203ENST00000371835 LAMC3Q9Y6N6 1575 aa15.59■□□□□ 0.09
BRD4-203ENST00000371835 EIF5BO60841 1220 aaKnown RBP15.56■□□□□ 0.08
BRD4-203ENST00000371835 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
BRD4-203ENST00000371835 SALL2Q9Y467 1007 aaPredicted RBP15.56■□□□□ 0.08
BRD4-203ENST00000371835 ZNF777Q9ULD5 760 aaPredicted RBP15.55■□□□□ 0.08
BRD4-203ENST00000371835 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
BRD4-203ENST00000371835 TOP2BQ02880 1626 aa15.55■□□□□ 0.08
BRD4-203ENST00000371835 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.55■□□□□ 0.08
BRD4-203ENST00000371835 FMN1Q68DA7 1419 aa15.54■□□□□ 0.08
BRD4-203ENST00000371835 ARAP1Q96P48 1450 aa15.53■□□□□ 0.08
BRD4-203ENST00000371835 PRXQ9BXM0 1461 aa15.52■□□□□ 0.07
BRD4-203ENST00000371835 NEFMP07197 916 aa15.52■□□□□ 0.07
BRD4-203ENST00000371835 IPO9Q96P70 1041 aaKnown RBP15.51■□□□□ 0.07
BRD4-203ENST00000371835 CANXP27824 592 aaKnown RBP15.5■□□□□ 0.07
BRD4-203ENST00000371835 ZBED9Q6R2W3 1325 aa15.5■□□□□ 0.07
BRD4-203ENST00000371835 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
BRD4-203ENST00000371835 NESP48681 1621 aa15.48■□□□□ 0.07
BRD4-203ENST00000371835 NUDCQ9Y266 331 aa15.48■□□□□ 0.07
BRD4-203ENST00000371835 PRKRIP1Q9H875 184 aaPredicted RBP15.47■□□□□ 0.07
BRD4-203ENST00000371835 DNMBPQ6XZF7 1577 aa15.46■□□□□ 0.07
BRD4-203ENST00000371835 LRRC9Q6ZRR7 1453 aa15.46■□□□□ 0.07
BRD4-203ENST00000371835 PHLDB1Q86UU1 1377 aa15.46■□□□□ 0.07
BRD4-203ENST00000371835 LAS1LQ9Y4W2 734 aaKnown RBP15.46■□□□□ 0.07
BRD4-203ENST00000371835 TCERG1O14776 1098 aaKnown RBP15.46■□□□□ 0.06
BRD4-203ENST00000371835 CUX1P39880 1505 aa15.46■□□□□ 0.06
BRD4-203ENST00000371835 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.06
BRD4-203ENST00000371835 UPF2Q9HAU5 1272 aaKnown RBP15.45■□□□□ 0.06
BRD4-203ENST00000371835 CCDC18Q5T9S5 1454 aa15.45■□□□□ 0.06
BRD4-203ENST00000371835 MPHOSPH9Q99550 1183 aa15.45■□□□□ 0.06
BRD4-203ENST00000371835 TOPBP1Q92547 1522 aa15.44■□□□□ 0.06
BRD4-203ENST00000371835 KDM2AQ9Y2K7 1162 aa15.44■□□□□ 0.06
BRD4-203ENST00000371835 L3MBTL2Q969R5 705 aa15.44■□□□□ 0.06
BRD4-203ENST00000371835 FHOD3Q2V2M9 1422 aa15.43■□□□□ 0.06
BRD4-203ENST00000371835 CARD11Q9BXL7 1154 aa15.43■□□□□ 0.06
BRD4-203ENST00000371835 TSPY4P0CV99 314 aa15.42■□□□□ 0.06
BRD4-203ENST00000371835 TSPY10P0CW01 314 aa15.42■□□□□ 0.06
BRD4-203ENST00000371835 WDR43Q15061 677 aaKnown RBP eCLIP15.42■□□□□ 0.06
BRD4-203ENST00000371835 UACAQ9BZF9 1416 aa15.42■□□□□ 0.06
BRD4-203ENST00000371835 IGF1RP08069 1367 aa15.42■□□□□ 0.06
BRD4-203ENST00000371835 GLIPR1L2Q4G1C9 344 aa15.4■□□□□ 0.06
BRD4-203ENST00000371835 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
BRD4-203ENST00000371835 USP35Q9P2H5 1018 aa15.39■□□□□ 0.05
BRD4-203ENST00000371835 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
BRD4-203ENST00000371835 SENP3-EIF4A1A0A087X0R7 540 aa15.38■□□□□ 0.05
BRD4-203ENST00000371835 RTN4Q9NQC3 1192 aaKnown RBP15.38■□□□□ 0.05
BRD4-203ENST00000371835 RAD54L2Q9Y4B4 1467 aa15.37■□□□□ 0.05
BRD4-203ENST00000371835 BECN1Q14457 450 aa15.37■□□□□ 0.05
BRD4-203ENST00000371835 BIVM-ERCC5R4GMW8 1640 aa15.37■□□□□ 0.05
BRD4-203ENST00000371835 FGD6Q6ZV73 1430 aa15.36■□□□□ 0.05
BRD4-203ENST00000371835 DNAJC5BQ9UF47 199 aa15.36■□□□□ 0.05
BRD4-203ENST00000371835 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
BRD4-203ENST00000371835 CFDP1Q9UEE9 299 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms