RNA–Protein interactions for RNA: ENST00000371835.8

BRD4-203, Transcript of bromodomain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD4, Length 4,624 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-203ENST00000371835 NISCHQ9Y2I1 1504 aa21.5■■□□□ 1.03
BRD4-203ENST00000371835 SUPT5HO00267 1087 aaKnown RBP19.44■□□□□ 0.7
BRD4-203ENST00000371835 SHROOM4Q9ULL8 1493 aa19.25■□□□□ 0.67
BRD4-203ENST00000371835 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
BRD4-203ENST00000371835 PCGF6Q9BYE7 350 aa18.84■□□□□ 0.61
BRD4-203ENST00000371835 HRCP23327 699 aa18.76■□□□□ 0.59
BRD4-203ENST00000371835 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
BRD4-203ENST00000371835 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
BRD4-203ENST00000371835 CCDC180Q9P1Z9 1646 aa18.51■□□□□ 0.55
BRD4-203ENST00000371835 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
BRD4-203ENST00000371835 TRIM26Q12899 539 aaPredicted RBP18.29■□□□□ 0.52
BRD4-203ENST00000371835 PPARGC1BQ86YN6 1023 aaKnown RBP18.17■□□□□ 0.5
BRD4-203ENST00000371835 EHMT2Q96KQ7 1210 aa18.1■□□□□ 0.49
BRD4-203ENST00000371835 TRIM41Q8WV44 630 aa18.09■□□□□ 0.49
BRD4-203ENST00000371835 FAM9AQ8IZU1 332 aaPredicted RBP18.09■□□□□ 0.49
BRD4-203ENST00000371835 CENPBP07199 599 aaPredicted RBP18.09■□□□□ 0.49
BRD4-203ENST00000371835 MYT1Q01538 1121 aa18.07■□□□□ 0.48
BRD4-203ENST00000371835 LOC105371045A0A1W2PR82 267 aa18.05■□□□□ 0.48
BRD4-203ENST00000371835 ABCC9O60706 1549 aa17.98■□□□□ 0.47
BRD4-203ENST00000371835 ZCCHC6Q5VYS8 1495 aaKnown RBP17.97■□□□□ 0.47
BRD4-203ENST00000371835 CCER1Q8TC90 406 aaPredicted RBP17.94■□□□□ 0.46
BRD4-203ENST00000371835 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
BRD4-203ENST00000371835 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
BRD4-203ENST00000371835 APLP2Q06481 763 aa17.67■□□□□ 0.42
BRD4-203ENST00000371835 TTBK1Q5TCY1 1321 aaPredicted RBP17.63■□□□□ 0.41
BRD4-203ENST00000371835 NACADO15069 1562 aa17.53■□□□□ 0.4
BRD4-203ENST00000371835 DIEXFQ68CQ4 756 aaKnown RBP17.51■□□□□ 0.39
BRD4-203ENST00000371835 YTHDC1Q96MU7 727 aaKnown RBP17.47■□□□□ 0.39
BRD4-203ENST00000371835 RB1CC1Q8TDY2 1594 aa17.47■□□□□ 0.39
BRD4-203ENST00000371835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
BRD4-203ENST00000371835 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
BRD4-203ENST00000371835 ACIN1Q9UKV3 1341 aaKnown RBP17.44■□□□□ 0.38
BRD4-203ENST00000371835 GTF3C3Q9Y5Q9 886 aa17.39■□□□□ 0.37
BRD4-203ENST00000371835 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
BRD4-203ENST00000371835 SCRIBQ14160 1630 aa17.33■□□□□ 0.36
BRD4-203ENST00000371835 ZNF316A6NFI3 1004 aaPredicted RBP17.19■□□□□ 0.34
BRD4-203ENST00000371835 PABPN1Q86U42 306 aaKnown RBP eCLIP17.17■□□□□ 0.34
BRD4-203ENST00000371835 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
BRD4-203ENST00000371835 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
BRD4-203ENST00000371835 NEFLP07196 543 aa17.12■□□□□ 0.33
BRD4-203ENST00000371835 RANGAP1P46060 587 aaPredicted RBP17.11■□□□□ 0.33
BRD4-203ENST00000371835 ERICH6Q7L0X2 663 aa17.03■□□□□ 0.32
BRD4-203ENST00000371835 RSF1Q96T23 1441 aaPredicted RBP16.99■□□□□ 0.31
BRD4-203ENST00000371835 CLSPNQ9HAW4 1339 aa16.96■□□□□ 0.31
BRD4-203ENST00000371835 CSRNP3Q8WYN3 585 aa16.91■□□□□ 0.3
BRD4-203ENST00000371835 BAZ1AQ9NRL2 1556 aaPredicted RBP16.79■□□□□ 0.28
BRD4-203ENST00000371835 ITGAEP38570 1179 aa16.75■□□□□ 0.27
BRD4-203ENST00000371835 MIER1Q8N108 512 aa16.74■□□□□ 0.27
BRD4-203ENST00000371835 ATP1B4Q9UN42 357 aaPredicted RBP16.7■□□□□ 0.26
BRD4-203ENST00000371835 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
BRD4-203ENST00000371835 EEA1Q15075 1411 aa16.68■□□□□ 0.26
BRD4-203ENST00000371835 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.25
BRD4-203ENST00000371835 CECR2Q9BXF3 1484 aa16.63■□□□□ 0.25
BRD4-203ENST00000371835 BCANQ96GW7 911 aa16.6■□□□□ 0.25
BRD4-203ENST00000371835 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
BRD4-203ENST00000371835 ANP32CO43423 234 aa16.54■□□□□ 0.24
BRD4-203ENST00000371835 MROH2BQ7Z745 1585 aa16.53■□□□□ 0.24
BRD4-203ENST00000371835 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.24
BRD4-203ENST00000371835 CLIP1P30622 1438 aa16.51■□□□□ 0.23
BRD4-203ENST00000371835 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
BRD4-203ENST00000371835 CDK11AQ9UQ88 783 aaPredicted RBP16.46■□□□□ 0.23
BRD4-203ENST00000371835 FKBP8Q14318 412 aa16.46■□□□□ 0.23
BRD4-203ENST00000371835 FAM50AQ14320 339 aaKnown RBP16.45■□□□□ 0.22
BRD4-203ENST00000371835 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
BRD4-203ENST00000371835 SMARCA4P51532 1647 aa16.43■□□□□ 0.22
BRD4-203ENST00000371835 ANP32EQ9BTT0 268 aa16.42■□□□□ 0.22
BRD4-203ENST00000371835 SUPT16HQ9Y5B9 1047 aaKnown RBP16.39■□□□□ 0.21
BRD4-203ENST00000371835 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
BRD4-203ENST00000371835 TOP2AP11388 1531 aaKnown RBP16.36■□□□□ 0.21
BRD4-203ENST00000371835 DDX10Q13206 875 aaKnown RBP16.34■□□□□ 0.21
BRD4-203ENST00000371835 SOGA1O94964 1423 aa16.33■□□□□ 0.2
BRD4-203ENST00000371835 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
BRD4-203ENST00000371835 WIZO95785 1651 aa16.32■□□□□ 0.2
BRD4-203ENST00000371835 MYT1LQ9UL68 1186 aa16.3■□□□□ 0.2
BRD4-203ENST00000371835 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
BRD4-203ENST00000371835 CCDC88BA6NC98 1476 aa16.28■□□□□ 0.2
BRD4-203ENST00000371835 BICRAQ9NZM4 1560 aa16.26■□□□□ 0.19
BRD4-203ENST00000371835 VPS8Q8N3P4 1428 aa16.25■□□□□ 0.19
BRD4-203ENST00000371835 TRIM52Q96A61 297 aa16.21■□□□□ 0.19
BRD4-203ENST00000371835 ABCC8Q09428 1581 aa16.2■□□□□ 0.18
BRD4-203ENST00000371835 TONSLQ96HA7 1378 aa16.2■□□□□ 0.18
BRD4-203ENST00000371835 UNC13AQ9UPW8 1703 aa16.18■□□□□ 0.18
BRD4-203ENST00000371835 HNRNPUQ00839 825 aaKnown RBP eCLIP16.18■□□□□ 0.18
BRD4-203ENST00000371835 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
BRD4-203ENST00000371835 POLR3GLQ9BT43 218 aa16.16■□□□□ 0.18
BRD4-203ENST00000371835 TSHZ2Q9NRE2 1034 aa16.16■□□□□ 0.18
BRD4-203ENST00000371835 DAXXQ9UER7 740 aaPredicted RBP16.16■□□□□ 0.18
BRD4-203ENST00000371835 NCAPD3P42695 1498 aa16.14■□□□□ 0.17
BRD4-203ENST00000371835 ANP32AP39687 249 aaKnown RBP16.1■□□□□ 0.17
BRD4-203ENST00000371835 CCNB3Q8WWL7 1395 aa16.09■□□□□ 0.17
BRD4-203ENST00000371835 TIMELESSQ9UNS1 1208 aa16.09■□□□□ 0.17
BRD4-203ENST00000371835 BCL11AQ9H165 835 aa16.07■□□□□ 0.16
BRD4-203ENST00000371835 CCER2I3L3R5 266 aa16.06■□□□□ 0.16
BRD4-203ENST00000371835 CNGB1Q14028 1251 aaPredicted RBP16.06■□□□□ 0.16
BRD4-203ENST00000371835 P3H3Q8IVL6 736 aa16.06■□□□□ 0.16
BRD4-203ENST00000371835 RBM19Q9Y4C8 960 aaKnown RBP16.03■□□□□ 0.16
BRD4-203ENST00000371835 HMGXB3Q12766 1538 aa16.03■□□□□ 0.16
BRD4-203ENST00000371835 DHX57Q6P158 1386 aaKnown RBP16.03■□□□□ 0.16
BRD4-203ENST00000371835 KIF27Q86VH2 1401 aa16.01■□□□□ 0.15
BRD4-203ENST00000371835 HIRIP3Q9BW71 556 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms