RNA–Protein interactions for RNA: ENST00000370794.7

USP33-204, Transcript of ubiquitin specific peptidase 33, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP33, Length 4,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-204ENST00000370794 RRP7BPQ9NSQ0 103 aa17.78■□□□□ 0.44
USP33-204ENST00000370794 ZNF316A6NFI3 1004 aaPredicted RBP17.75■□□□□ 0.43
USP33-204ENST00000370794 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
USP33-204ENST00000370794 JPH4Q96JJ6 628 aa17.73■□□□□ 0.43
USP33-204ENST00000370794 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
USP33-204ENST00000370794 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
USP33-204ENST00000370794 FHAD1B1AJZ9 1412 aa17.71■□□□□ 0.43
USP33-204ENST00000370794 TONSLQ96HA7 1378 aa17.69■□□□□ 0.42
USP33-204ENST00000370794 GTF3C3Q9Y5Q9 886 aa17.68■□□□□ 0.42
USP33-204ENST00000370794 CYB5RLQ6IPT4 315 aa17.67■□□□□ 0.42
USP33-204ENST00000370794 CCNB3Q8WWL7 1395 aa17.65■□□□□ 0.42
USP33-204ENST00000370794 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
USP33-204ENST00000370794 NESP48681 1621 aa17.63■□□□□ 0.41
USP33-204ENST00000370794 KDM2AQ9Y2K7 1162 aa17.63■□□□□ 0.41
USP33-204ENST00000370794 PPP1R15AO75807 674 aaPredicted RBP17.61■□□□□ 0.41
USP33-204ENST00000370794 MYT1Q01538 1121 aa17.61■□□□□ 0.41
USP33-204ENST00000370794 BICRAQ9NZM4 1560 aa17.6■□□□□ 0.41
USP33-204ENST00000370794 RAPGEF2Q9Y4G8 1499 aa17.6■□□□□ 0.41
USP33-204ENST00000370794 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
USP33-204ENST00000370794 MLECQ14165 292 aa17.59■□□□□ 0.41
USP33-204ENST00000370794 RAD54L2Q9Y4B4 1467 aa17.58■□□□□ 0.4
USP33-204ENST00000370794 SCAF1Q9H7N4 1312 aaKnown RBP17.55■□□□□ 0.4
USP33-204ENST00000370794 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
USP33-204ENST00000370794 ANP32CO43423 234 aa17.53■□□□□ 0.4
USP33-204ENST00000370794 RGL3Q3MIN7 710 aa17.53■□□□□ 0.4
USP33-204ENST00000370794 EFCAB2Q5VUJ9 269 aa17.53■□□□□ 0.4
USP33-204ENST00000370794 FMN1Q68DA7 1419 aa17.52■□□□□ 0.4
USP33-204ENST00000370794 AQRO60306 1485 aaKnown RBP eCLIP17.52■□□□□ 0.42e-6■■□□□ 13.6
USP33-204ENST00000370794 CFTRP13569 1480 aa17.52■□□□□ 0.4
USP33-204ENST00000370794 HMGXB3Q12766 1538 aa17.51■□□□□ 0.39
USP33-204ENST00000370794 SLC24A1O60721 1099 aa17.49■□□□□ 0.39
USP33-204ENST00000370794 PTPRGP23470 1445 aa17.48■□□□□ 0.39
USP33-204ENST00000370794 NEFMP07197 916 aa17.48■□□□□ 0.39
USP33-204ENST00000370794 C14orf37Q86TY3 774 aa17.48■□□□□ 0.39
USP33-204ENST00000370794 FHOD3Q2V2M9 1422 aa17.48■□□□□ 0.39
USP33-204ENST00000370794 GGT6Q6P531 493 aa17.46■□□□□ 0.39
USP33-204ENST00000370794 RUSC2Q8N2Y8 1516 aa17.46■□□□□ 0.39
USP33-204ENST00000370794 VPS8Q8N3P4 1428 aa17.45■□□□□ 0.38
USP33-204ENST00000370794 IGF1RP08069 1367 aa17.45■□□□□ 0.38
USP33-204ENST00000370794 MRC2Q9UBG0 1479 aa17.45■□□□□ 0.38
USP33-204ENST00000370794 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
USP33-204ENST00000370794 GRIN2BQ13224 1484 aa17.36■□□□□ 0.37
USP33-204ENST00000370794 KANK1Q14678 1352 aa17.35■□□□□ 0.37
USP33-204ENST00000370794 PLEKHG5O94827 1062 aa17.34■□□□□ 0.37
USP33-204ENST00000370794 ARHGAP35Q9NRY4 1499 aa17.33■□□□□ 0.36
USP33-204ENST00000370794 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
USP33-204ENST00000370794 IFT140Q96RY7 1462 aa17.32■□□□□ 0.36
USP33-204ENST00000370794 HNRNPMP52272 730 aaKnown RBP eCLIP17.31■□□□□ 0.363e-7■■■■□ 22
USP33-204ENST00000370794 MIER1Q8N108 512 aa17.3■□□□□ 0.36
USP33-204ENST00000370794 SPAG9O60271 1321 aaKnown RBP17.29■□□□□ 0.36
USP33-204ENST00000370794 KIF3BO15066 747 aa17.28■□□□□ 0.36
USP33-204ENST00000370794 FAM69CQ0P6D2 419 aa17.28■□□□□ 0.36
USP33-204ENST00000370794 DDX10Q13206 875 aaKnown RBP17.28■□□□□ 0.36
USP33-204ENST00000370794 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
USP33-204ENST00000370794 HIRIP3Q9BW71 556 aaPredicted RBP17.26■□□□□ 0.35
USP33-204ENST00000370794 CCDC18Q5T9S5 1454 aa17.26■□□□□ 0.35
USP33-204ENST00000370794 EIF4G2P78344 907 aaKnown RBP eCLIP17.25■□□□□ 0.35
USP33-204ENST00000370794 TMC1Q8TDI8 760 aa17.25■□□□□ 0.35
USP33-204ENST00000370794 ERICH6Q7L0X2 663 aa17.25■□□□□ 0.35
USP33-204ENST00000370794 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
USP33-204ENST00000370794 HDGFP51858 240 aaKnown RBP17.23■□□□□ 0.35
USP33-204ENST00000370794 UNC13AQ9UPW8 1703 aa17.23■□□□□ 0.35
USP33-204ENST00000370794 RSPH4AQ5TD94 716 aa17.23■□□□□ 0.35
USP33-204ENST00000370794 POGKQ9P215 609 aa17.22■□□□□ 0.35
USP33-204ENST00000370794 ANKRD30AQ9BXX3 1397 aa17.2■□□□□ 0.34
USP33-204ENST00000370794 ZBTB7CA1YPR0 619 aa17.2■□□□□ 0.34
USP33-204ENST00000370794 SIN3AQ96ST3 1273 aa17.2■□□□□ 0.34
USP33-204ENST00000370794 HAP1P54257 671 aaPredicted RBP17.2■□□□□ 0.34
USP33-204ENST00000370794 PKD2Q13563 968 aa17.19■□□□□ 0.34
USP33-204ENST00000370794 CARD11Q9BXL7 1154 aa17.19■□□□□ 0.34
USP33-204ENST00000370794 PRG4Q92954 1404 aaPredicted RBP17.17■□□□□ 0.34
USP33-204ENST00000370794 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
USP33-204ENST00000370794 CUX1P39880 1505 aa17.16■□□□□ 0.34
USP33-204ENST00000370794 NUP155O75694 1391 aa17.16■□□□□ 0.34
USP33-204ENST00000370794 SYNJ1O43426 1573 aa17.16■□□□□ 0.34
USP33-204ENST00000370794 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
USP33-204ENST00000370794 WASHC2CQ9Y4E1 1318 aa17.16■□□□□ 0.34
USP33-204ENST00000370794 LMOD2Q6P5Q4 547 aa17.15■□□□□ 0.34
USP33-204ENST00000370794 SNAPC4Q5SXM2 1469 aa17.15■□□□□ 0.34
USP33-204ENST00000370794 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
USP33-204ENST00000370794 A0A0G2JS52 829 aa17.15■□□□□ 0.34
USP33-204ENST00000370794 CANXP27824 592 aaKnown RBP17.14■□□□□ 0.33
USP33-204ENST00000370794 FOXD1Q16676 465 aa17.12■□□□□ 0.33
USP33-204ENST00000370794 CDCA8Q53HL2 280 aa17.11■□□□□ 0.33
USP33-204ENST00000370794 SETD5Q9C0A6 1442 aa17.1■□□□□ 0.33
USP33-204ENST00000370794 ZBTB47Q9UFB7 747 aaPredicted RBP17.09■□□□□ 0.33
USP33-204ENST00000370794 FAM9BQ8IZU0 186 aa17.08■□□□□ 0.33
USP33-204ENST00000370794 BCL11AQ9H165 835 aa17.08■□□□□ 0.33
USP33-204ENST00000370794 SALL2Q9Y467 1007 aaPredicted RBP17.08■□□□□ 0.33
USP33-204ENST00000370794 SAFB2Q14151 953 aaKnown RBP eCLIP17.06■□□□□ 0.32
USP33-204ENST00000370794 TOP2BQ02880 1626 aa17.06■□□□□ 0.32
USP33-204ENST00000370794 WDR43Q15061 677 aaKnown RBP eCLIP17.05■□□□□ 0.32
USP33-204ENST00000370794 MPHOSPH9Q99550 1183 aa17.05■□□□□ 0.32
USP33-204ENST00000370794 STK26Q9P289 416 aa17.05■□□□□ 0.32
USP33-204ENST00000370794 PEG3Q9GZU2 1588 aa17.04■□□□□ 0.32
USP33-204ENST00000370794 DAXXQ9UER7 740 aaPredicted RBP17.04■□□□□ 0.32
USP33-204ENST00000370794 PPM1GO15355 546 aaPredicted RBP17.02■□□□□ 0.31
USP33-204ENST00000370794 EID1Q9Y6B2 187 aa17.01■□□□□ 0.31
USP33-204ENST00000370794 MRS2Q9HD23 443 aa17.01■□□□□ 0.31
USP33-204ENST00000370794 KNSTRNQ9Y448 316 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms