RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 GABBR2O75899 941 aa16.83■□□□□ 0.28
YBX3-204ENST00000366290 PAK3O75914 559 aaPredicted RBP16.81■□□□□ 0.28
YBX3-204ENST00000366290 RASEFQ8IZ41 740 aa16.81■□□□□ 0.28
YBX3-204ENST00000366290 NUBP1P53384 320 aa16.79■□□□□ 0.28
YBX3-204ENST00000366290 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
YBX3-204ENST00000366290 TSPYL2Q9H2G4 693 aaPredicted RBP16.76■□□□□ 0.27
YBX3-204ENST00000366290 PHF12Q96QT6 1004 aa16.74■□□□□ 0.27
YBX3-204ENST00000366290 DCAF8L2P0C7V8 631 aa16.73■□□□□ 0.27
YBX3-204ENST00000366290 ECM2O94769 699 aaPredicted RBP16.72■□□□□ 0.27
YBX3-204ENST00000366290 CCDC61Q9Y6R9 512 aa16.72■□□□□ 0.27
YBX3-204ENST00000366290 CLCN6P51797 869 aa16.7■□□□□ 0.26
YBX3-204ENST00000366290 ABCC9O60706 1549 aa16.69■□□□□ 0.26
YBX3-204ENST00000366290 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
YBX3-204ENST00000366290 GALR2O43603 387 aaPredicted RBP16.63■□□□□ 0.25
YBX3-204ENST00000366290 FAM212AQ96EL1 285 aa16.59■□□□□ 0.25
YBX3-204ENST00000366290 KIF12Q96FN5 646 aa16.56■□□□□ 0.24
YBX3-204ENST00000366290 RGL2O15211 777 aa16.55■□□□□ 0.24
YBX3-204ENST00000366290 MS4A3Q96HJ5 214 aa16.55■□□□□ 0.24
YBX3-204ENST00000366290 POTEIP0CG38 1075 aa16.54■□□□□ 0.24
YBX3-204ENST00000366290 GSE1Q14687 1217 aa16.53■□□□□ 0.24
YBX3-204ENST00000366290 TRIM41Q8WV44 630 aa16.51■□□□□ 0.23
YBX3-204ENST00000366290 MAP3K13O43283 966 aa16.49■□□□□ 0.23
YBX3-204ENST00000366290 DCAF8Q5TAQ9 597 aa16.49■□□□□ 0.23
YBX3-204ENST00000366290 PLCB2Q00722 1185 aa16.45■□□□□ 0.22
YBX3-204ENST00000366290 DCBLD2Q96PD2 775 aa16.43■□□□□ 0.22
YBX3-204ENST00000366290 PYGBP11216 843 aa16.39■□□□□ 0.21
YBX3-204ENST00000366290 SGIP1Q9BQI5 828 aa16.38■□□□□ 0.21
YBX3-204ENST00000366290 TRPC6Q9Y210 931 aa16.38■□□□□ 0.21
YBX3-204ENST00000366290 PCDHB13Q9Y5F0 798 aa16.36■□□□□ 0.21
YBX3-204ENST00000366290 BBXQ8WY36 941 aaPredicted RBP16.34■□□□□ 0.21
YBX3-204ENST00000366290 IFNL1Q8IU54 200 aa16.33■□□□□ 0.2
YBX3-204ENST00000366290 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.2
YBX3-204ENST00000366290 ASTLQ6HA08 431 aaPredicted RBP16.32■□□□□ 0.2
YBX3-204ENST00000366290 ATMINO43313 823 aaPredicted RBP16.29■□□□□ 0.2
YBX3-204ENST00000366290 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.29■□□□□ 0.2
YBX3-204ENST00000366290 CHGAP10645 457 aaKnown RBP16.28■□□□□ 0.2
YBX3-204ENST00000366290 CHRM1P11229 460 aaPredicted RBP16.27■□□□□ 0.2
YBX3-204ENST00000366290 PELP1Q8IZL8 1130 aaKnown RBP16.27■□□□□ 0.2
YBX3-204ENST00000366290 BMP2KQ9NSY1 1161 aaPredicted RBP16.27■□□□□ 0.2
YBX3-204ENST00000366290 TIE1P35590 1138 aa16.25■□□□□ 0.19
YBX3-204ENST00000366290 RIOK3O14730 519 aaKnown RBP16.23■□□□□ 0.19
YBX3-204ENST00000366290 HAP1P54257 671 aaPredicted RBP16.22■□□□□ 0.19
YBX3-204ENST00000366290 ATN1P54259 1190 aaPredicted RBP16.22■□□□□ 0.19
YBX3-204ENST00000366290 PCDHB8Q9UN66 801 aa16.21■□□□□ 0.19
YBX3-204ENST00000366290 TTLL13PA6NNM8 815 aa16.19■□□□□ 0.18
YBX3-204ENST00000366290 HS6ST3Q8IZP7 471 aa16.19■□□□□ 0.18
YBX3-204ENST00000366290 TAOK2Q9UL54 1235 aa16.18■□□□□ 0.18
YBX3-204ENST00000366290 PAXIP1Q6ZW49 1069 aaPredicted RBP16.17■□□□□ 0.18
YBX3-204ENST00000366290 ZNF467Q7Z7K2 595 aaPredicted RBP16.14■□□□□ 0.17
YBX3-204ENST00000366290 CFAP44Q96MT7 982 aa16.14■□□□□ 0.17
YBX3-204ENST00000366290 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
YBX3-204ENST00000366290 TMEM106CQ9BVX2 250 aa16.1■□□□□ 0.17
YBX3-204ENST00000366290 SPRYD3Q8NCJ5 442 aa16.09■□□□□ 0.17
YBX3-204ENST00000366290 SLC39A7Q92504 469 aa16.09■□□□□ 0.17
YBX3-204ENST00000366290 LHX8Q68G74 356 aa16.08■□□□□ 0.16
YBX3-204ENST00000366290 METRNQ9UJH8 293 aa16.08■□□□□ 0.16
YBX3-204ENST00000366290 TRIM35Q9UPQ4 493 aa16.08■□□□□ 0.16
YBX3-204ENST00000366290 DNAJC5Q9H3Z4 198 aa16.06■□□□□ 0.16
YBX3-204ENST00000366290 STK25O00506 426 aa16.05■□□□□ 0.16
YBX3-204ENST00000366290 C7P10643 843 aa16.05■□□□□ 0.16
YBX3-204ENST00000366290 POTEB2H3BUK9 544 aa16.02■□□□□ 0.16
YBX3-204ENST00000366290 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.01■□□□□ 0.15
YBX3-204ENST00000366290 ZFP91Q96JP5 570 aaPredicted RBP16.01■□□□□ 0.15
YBX3-204ENST00000366290 POTEFA5A3E0 1075 aa16■□□□□ 0.15
YBX3-204ENST00000366290 PSEN1P49768 467 aa16■□□□□ 0.15
YBX3-204ENST00000366290 PDAP1Q13442 181 aaKnown RBP15.97■□□□□ 0.15
YBX3-204ENST00000366290 BCL11BQ9C0K0 894 aaPredicted RBP15.97■□□□□ 0.15
YBX3-204ENST00000366290 NKX1-1Q15270 411 aaPredicted RBP15.96■□□□□ 0.15
YBX3-204ENST00000366290 IER5LQ5T953 404 aa15.96■□□□□ 0.15
YBX3-204ENST00000366290 VSIG10Q8N0Z9 540 aa15.96■□□□□ 0.15
YBX3-204ENST00000366290 STK24Q9Y6E0 443 aa15.96■□□□□ 0.15
YBX3-204ENST00000366290 COLQQ9Y215 455 aaPredicted RBP15.93■□□□□ 0.14
YBX3-204ENST00000366290 TSHZ2Q9NRE2 1034 aa15.89■□□□□ 0.13
YBX3-204ENST00000366290 POTEJP0CG39 1038 aa15.88■□□□□ 0.13
YBX3-204ENST00000366290 IRX5P78411 483 aaPredicted RBP15.87■□□□□ 0.13
YBX3-204ENST00000366290 GTPBP6O43824 516 aaPredicted RBP15.85■□□□□ 0.13
YBX3-204ENST00000366290 SEC24BO95487 1268 aa15.84■□□□□ 0.13
YBX3-204ENST00000366290 KDM2AQ9Y2K7 1162 aa15.84■□□□□ 0.13
YBX3-204ENST00000366290 OTUD5Q96G74 571 aa15.81■□□□□ 0.12
YBX3-204ENST00000366290 CABP2Q9NPB3 220 aa15.8■□□□□ 0.12
YBX3-204ENST00000366290 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
YBX3-204ENST00000366290 NACADO15069 1562 aa15.79■□□□□ 0.12
YBX3-204ENST00000366290 GOLGA2Q08379 1002 aa15.78■□□□□ 0.12
YBX3-204ENST00000366290 PLCG2P16885 1265 aa15.77■□□□□ 0.12
YBX3-204ENST00000366290 MKRN3Q13064 507 aaKnown RBP15.76■□□□□ 0.11
YBX3-204ENST00000366290 OCEL1Q9H607 264 aa15.76■□□□□ 0.11
YBX3-204ENST00000366290 RYDENQ9NUL5 291 aaKnown RBP15.75■□□□□ 0.11
YBX3-204ENST00000366290 ILDR1Q86SU0 546 aaPredicted RBP15.74■□□□□ 0.11
YBX3-204ENST00000366290 PDCD7Q8N8D1 485 aaKnown RBP15.74■□□□□ 0.11
YBX3-204ENST00000366290 MYO15BQ96JP2 1530 aa15.72■□□□□ 0.11
YBX3-204ENST00000366290 EFCAB3Q8N7B9 438 aa15.69■□□□□ 0.1
YBX3-204ENST00000366290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.68■□□□□ 0.1
YBX3-204ENST00000366290 MAMSTRQ6ZN01 415 aa15.65■□□□□ 0.1
YBX3-204ENST00000366290 ZCCHC6Q5VYS8 1495 aaKnown RBP15.63■□□□□ 0.09
YBX3-204ENST00000366290 SCUBE2Q9NQ36 999 aa15.62■□□□□ 0.09
YBX3-204ENST00000366290 DCAF1Q9Y4B6 1507 aa15.6■□□□□ 0.09
YBX3-204ENST00000366290 BCANQ96GW7 911 aa15.6■□□□□ 0.09
YBX3-204ENST00000366290 MFRPQ9BY79 579 aa15.6■□□□□ 0.09
YBX3-204ENST00000366290 DPY19L2Q6NUT2 758 aa15.58■□□□□ 0.08
YBX3-204ENST00000366290 SOX12O15370 315 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms