RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 PRR29P0C7W0 189 aa3.29□□□□□ -1.88
RNU6-54P-201ENST00000365563 FBLN2P98095 1184 aa3.29□□□□□ -1.88
RNU6-54P-201ENST00000365563 ZNF579Q8NAF0 562 aaKnown RBP3.28□□□□□ -1.88
RNU6-54P-201ENST00000365563 IRX2Q9BZI1 471 aaPredicted RBP3.27□□□□□ -1.89
RNU6-54P-201ENST00000365563 ZNF692Q9BU19 519 aaPredicted RBP3.25□□□□□ -1.89
RNU6-54P-201ENST00000365563 SCUBE2Q9NQ36 999 aa3.25□□□□□ -1.89
RNU6-54P-201ENST00000365563 FARP1Q9Y4F1 1045 aaPredicted RBP3.25□□□□□ -1.89
RNU6-54P-201ENST00000365563 ZRANB1Q9UGI0 708 aa3.24□□□□□ -1.89
RNU6-54P-201ENST00000365563 ATF5Q9Y2D1 282 aaPredicted RBP3.24□□□□□ -1.89
RNU6-54P-201ENST00000365563 SSUH2Q9Y2M2 353 aa3.24□□□□□ -1.89
RNU6-54P-201ENST00000365563 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
RNU6-54P-201ENST00000365563 PAK3O75914 559 aaPredicted RBP3.22□□□□□ -1.89
RNU6-54P-201ENST00000365563 SLC39A7Q92504 469 aa3.22□□□□□ -1.89
RNU6-54P-201ENST00000365563 ANO8Q9HCE9 1232 aaPredicted RBP3.22□□□□□ -1.89
RNU6-54P-201ENST00000365563 GALR2O43603 387 aaPredicted RBP3.21□□□□□ -1.9
RNU6-54P-201ENST00000365563 C7P10643 843 aa3.21□□□□□ -1.9
RNU6-54P-201ENST00000365563 LCE1DQ5T752 114 aa3.21□□□□□ -1.9
RNU6-54P-201ENST00000365563 METRNQ9UJH8 293 aa3.21□□□□□ -1.9
RNU6-54P-201ENST00000365563 KCNA4P22459 653 aa3.2□□□□□ -1.9
RNU6-54P-201ENST00000365563 PABPN1Q86U42 306 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU6-54P-201ENST00000365563 FOXD4L1Q9NU39 408 aa3.17□□□□□ -1.9
RNU6-54P-201ENST00000365563 RNF166Q96A37 237 aaPredicted RBP3.16□□□□□ -1.9
RNU6-54P-201ENST00000365563 ASTLQ6HA08 431 aaPredicted RBP3.15□□□□□ -1.91
RNU6-54P-201ENST00000365563 PELP1Q8IZL8 1130 aaKnown RBP3.14□□□□□ -1.91
RNU6-54P-201ENST00000365563 POTEJP0CG39 1038 aa3.13□□□□□ -1.91
RNU6-54P-201ENST00000365563 ATXN8OSP0DMR3 200 aa3.13□□□□□ -1.91
RNU6-54P-201ENST00000365563 ATMINO43313 823 aaPredicted RBP3.12□□□□□ -1.91
RNU6-54P-201ENST00000365563 PHF12Q96QT6 1004 aa3.12□□□□□ -1.91
RNU6-54P-201ENST00000365563 NPM1P06748 294 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU6-54P-201ENST00000365563 TMEM121BQ9BXQ6 578 aaPredicted RBP3.1□□□□□ -1.91
RNU6-54P-201ENST00000365563 MKRN4PQ13434 485 aaPredicted RBP3.09□□□□□ -1.91
RNU6-54P-201ENST00000365563 ST18O60284 1047 aa3.08□□□□□ -1.92
RNU6-54P-201ENST00000365563 MS4A3Q96HJ5 214 aa3.08□□□□□ -1.92
RNU6-54P-201ENST00000365563 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
RNU6-54P-201ENST00000365563 STAG3Q9UJ98 1225 aa3.08□□□□□ -1.92
RNU6-54P-201ENST00000365563 SEC24BO95487 1268 aa3.07□□□□□ -1.92
RNU6-54P-201ENST00000365563 Q6ZNB5 142 aa3.07□□□□□ -1.92
RNU6-54P-201ENST00000365563 CREBZFQ9NS37 354 aa3.07□□□□□ -1.92
RNU6-54P-201ENST00000365563 SNPHO15079 494 aa3.06□□□□□ -1.92
RNU6-54P-201ENST00000365563 ATN1P54259 1190 aaPredicted RBP3.05□□□□□ -1.92
RNU6-54P-201ENST00000365563 SLAIN1Q8ND83 568 aa3.05□□□□□ -1.92
RNU6-54P-201ENST00000365563 IER5LQ5T953 404 aa3.02□□□□□ -1.93
RNU6-54P-201ENST00000365563 POTEFA5A3E0 1075 aa3.01□□□□□ -1.93
RNU6-54P-201ENST00000365563 TIE1P35590 1138 aa3.01□□□□□ -1.93
RNU6-54P-201ENST00000365563 SLC4A1APQ9BWU0 796 aaKnown RBP3.01□□□□□ -1.93
RNU6-54P-201ENST00000365563 BMP2KQ9NSY1 1161 aaPredicted RBP3.01□□□□□ -1.93
RNU6-54P-201ENST00000365563 EMP3P54852 163 aa3□□□□□ -1.93
RNU6-54P-201ENST00000365563 ZNF775Q96BV0 537 aaPredicted RBP3□□□□□ -1.93
RNU6-54P-201ENST00000365563 STK17AQ9UEE5 414 aa3□□□□□ -1.93
RNU6-54P-201ENST00000365563 PLA2G2EQ9NZK7 142 aa2.99□□□□□ -1.93
RNU6-54P-201ENST00000365563 MARVELD3Q96A59 401 aa2.98□□□□□ -1.93
RNU6-54P-201ENST00000365563 COLQQ9Y215 455 aaPredicted RBP2.98□□□□□ -1.93
RNU6-54P-201ENST00000365563 PLCG2P16885 1265 aa2.97□□□□□ -1.93
RNU6-54P-201ENST00000365563 KRTAP3-3Q9BYR6 98 aa2.97□□□□□ -1.93
RNU6-54P-201ENST00000365563 KRTAP3-2Q9BYR7 98 aa2.97□□□□□ -1.93
RNU6-54P-201ENST00000365563 KIF12Q96FN5 646 aa2.96□□□□□ -1.94
RNU6-54P-201ENST00000365563 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
RNU6-54P-201ENST00000365563 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.96□□□□□ -1.94
RNU6-54P-201ENST00000365563 TTLL13PA6NNM8 815 aa2.95□□□□□ -1.94
RNU6-54P-201ENST00000365563 HS3ST6Q96QI5 342 aa2.95□□□□□ -1.94
RNU6-54P-201ENST00000365563 TSPYL2Q9H2G4 693 aaPredicted RBP2.95□□□□□ -1.94
RNU6-54P-201ENST00000365563 TRIM35Q9UPQ4 493 aa2.95□□□□□ -1.94
RNU6-54P-201ENST00000365563 CCDC61Q9Y6R9 512 aa2.95□□□□□ -1.94
RNU6-54P-201ENST00000365563 RGS19P49795 217 aa2.94□□□□□ -1.94
RNU6-54P-201ENST00000365563 MNX1P50219 401 aaPredicted RBP2.94□□□□□ -1.94
RNU6-54P-201ENST00000365563 FAM205CA6NFA0 338 aa2.93□□□□□ -1.94
RNU6-54P-201ENST00000365563 PTGER2P43116 358 aa2.93□□□□□ -1.94
RNU6-54P-201ENST00000365563 MYT1LQ9UL68 1186 aa2.93□□□□□ -1.94
RNU6-54P-201ENST00000365563 LAMC2Q13753 1193 aa2.92□□□□□ -1.94
RNU6-54P-201ENST00000365563 MAP3K13O43283 966 aa2.91□□□□□ -1.94
RNU6-54P-201ENST00000365563 C3orf67Q6ZVT6 689 aa2.91□□□□□ -1.94
RNU6-54P-201ENST00000365563 SGIP1Q9BQI5 828 aa2.91□□□□□ -1.94
RNU6-54P-201ENST00000365563 TRPC6Q9Y210 931 aa2.91□□□□□ -1.94
RNU6-54P-201ENST00000365563 ZBTB22O15209 634 aa2.9□□□□□ -1.95
RNU6-54P-201ENST00000365563 PLEKHG5O94827 1062 aa2.89□□□□□ -1.95
RNU6-54P-201ENST00000365563 OCEL1Q9H607 264 aa2.89□□□□□ -1.95
RNU6-54P-201ENST00000365563 IRX5P78411 483 aaPredicted RBP2.88□□□□□ -1.95
RNU6-54P-201ENST00000365563 PCDHB13Q9Y5F0 798 aa2.88□□□□□ -1.95
RNU6-54P-201ENST00000365563 TMEM106CQ9BVX2 250 aa2.87□□□□□ -1.95
RNU6-54P-201ENST00000365563 POTEB3A0JP26 581 aa2.86□□□□□ -1.95
RNU6-54P-201ENST00000365563 POTEBQ6S5H4 581 aa2.86□□□□□ -1.95
RNU6-54P-201ENST00000365563 ERBB3P21860 1342 aa2.86□□□□□ -1.95
RNU6-54P-201ENST00000365563 ZNF710Q8N1W2 664 aa2.85□□□□□ -1.95
RNU6-54P-201ENST00000365563 L3MBTL3Q96JM7 780 aaPredicted RBP2.85□□□□□ -1.95
RNU6-54P-201ENST00000365563 SPDYE4A6NLX3 237 aa2.84□□□□□ -1.95
RNU6-54P-201ENST00000365563 RGS20O76081 388 aa2.84□□□□□ -1.95
RNU6-54P-201ENST00000365563 RIMBP2O15034 1052 aa2.83□□□□□ -1.96
RNU6-54P-201ENST00000365563 HOXB1P14653 301 aaPredicted RBP2.82□□□□□ -1.96
RNU6-54P-201ENST00000365563 DOK7Q18PE1 504 aa2.82□□□□□ -1.96
RNU6-54P-201ENST00000365563 G3V3G9 751 aa2.81□□□□□ -1.96
RNU6-54P-201ENST00000365563 VARS2Q5ST30 1063 aaKnown RBP2.81□□□□□ -1.96
RNU6-54P-201ENST00000365563 DCAF8Q5TAQ9 597 aa2.81□□□□□ -1.96
RNU6-54P-201ENST00000365563 ZNF787Q6DD87 383 aa2.81□□□□□ -1.96
RNU6-54P-201ENST00000365563 IFNL1Q8IU54 200 aa2.81□□□□□ -1.96
RNU6-54P-201ENST00000365563 RASEFQ8IZ41 740 aa2.81□□□□□ -1.96
RNU6-54P-201ENST00000365563 HCSTQ9UBK5 93 aa2.81□□□□□ -1.96
RNU6-54P-201ENST00000365563 GOLGA2Q08379 1002 aa2.8□□□□□ -1.96
RNU6-54P-201ENST00000365563 ZNF687Q8N1G0 1237 aa2.79□□□□□ -1.96
RNU6-54P-201ENST00000365563 ZBTB47Q9UFB7 747 aaPredicted RBP2.79□□□□□ -1.96
RNU6-54P-201ENST00000365563 MKRN3Q13064 507 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms