RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 MAMSTRQ6ZN01 415 aa7.56□□□□□ -1.2
RNU4-11P-201ENST00000365287 SLC39A7Q92504 469 aa7.56□□□□□ -1.2
RNU4-11P-201ENST00000365287 MS4A3Q96HJ5 214 aa7.54□□□□□ -1.2
RNU4-11P-201ENST00000365287 ATMINO43313 823 aaPredicted RBP7.53□□□□□ -1.2
RNU4-11P-201ENST00000365287 CSRNP3Q8WYN3 585 aa7.52□□□□□ -1.21
RNU4-11P-201ENST00000365287 POTEJP0CG39 1038 aa7.49□□□□□ -1.21
RNU4-11P-201ENST00000365287 SCUBE2Q9NQ36 999 aa7.49□□□□□ -1.21
RNU4-11P-201ENST00000365287 LCE2DQ5TA82 110 aaPredicted RBP7.45□□□□□ -1.22
RNU4-11P-201ENST00000365287 ATN1P54259 1190 aaPredicted RBP7.43□□□□□ -1.22
RNU4-11P-201ENST00000365287 CCDC61Q9Y6R9 512 aa7.43□□□□□ -1.22
RNU4-11P-201ENST00000365287 FAM163AQ96GL9 167 aaPredicted RBP7.41□□□□□ -1.22
RNU4-11P-201ENST00000365287 TSPYL2Q9H2G4 693 aaPredicted RBP7.41□□□□□ -1.22
RNU4-11P-201ENST00000365287 KIF12Q96FN5 646 aa7.4□□□□□ -1.22
RNU4-11P-201ENST00000365287 BMP2KQ9NSY1 1161 aaPredicted RBP7.39□□□□□ -1.23
RNU4-11P-201ENST00000365287 TIE1P35590 1138 aa7.38□□□□□ -1.23
RNU4-11P-201ENST00000365287 PROM2Q8N271 834 aa7.38□□□□□ -1.23
RNU4-11P-201ENST00000365287 POTEFA5A3E0 1075 aa7.37□□□□□ -1.23
RNU4-11P-201ENST00000365287 TRPC6Q9Y210 931 aa7.33□□□□□ -1.24
RNU4-11P-201ENST00000365287 MAP3K13O43283 966 aa7.32□□□□□ -1.24
RNU4-11P-201ENST00000365287 PLEKHG5O94827 1062 aa7.32□□□□□ -1.24
RNU4-11P-201ENST00000365287 SEC24BO95487 1268 aa7.32□□□□□ -1.24
RNU4-11P-201ENST00000365287 IER5LQ5T953 404 aa7.31□□□□□ -1.24
RNU4-11P-201ENST00000365287 TTLL13PA6NNM8 815 aa7.3□□□□□ -1.24
RNU4-11P-201ENST00000365287 CDAN1Q8IWY9 1227 aa7.3□□□□□ -1.24
RNU4-11P-201ENST00000365287 COLQQ9Y215 455 aaPredicted RBP7.3□□□□□ -1.24
RNU4-11P-201ENST00000365287 RASEFQ8IZ41 740 aa7.28□□□□□ -1.24
RNU4-11P-201ENST00000365287 SGIP1Q9BQI5 828 aa7.28□□□□□ -1.24
RNU4-11P-201ENST00000365287 EHMT2Q96KQ7 1210 aa7.25□□□□□ -1.25
RNU4-11P-201ENST00000365287 TRIM35Q9UPQ4 493 aa7.25□□□□□ -1.25
RNU4-11P-201ENST00000365287 MIER1Q8N108 512 aa7.24□□□□□ -1.25
RNU4-11P-201ENST00000365287 PCDHB13Q9Y5F0 798 aa7.23□□□□□ -1.25
RNU4-11P-201ENST00000365287 ST18O60284 1047 aa7.22□□□□□ -1.25
RNU4-11P-201ENST00000365287 SLAIN1Q8ND83 568 aa7.22□□□□□ -1.25
RNU4-11P-201ENST00000365287 ZBTB47Q9UFB7 747 aaPredicted RBP7.2□□□□□ -1.26
RNU4-11P-201ENST00000365287 PLCG2P16885 1265 aa7.18□□□□□ -1.26
RNU4-11P-201ENST00000365287 TMEM121BQ9BXQ6 578 aaPredicted RBP7.18□□□□□ -1.26
RNU4-11P-201ENST00000365287 IFNL1Q8IU54 200 aa7.17□□□□□ -1.26
RNU4-11P-201ENST00000365287 PLCD3Q8N3E9 789 aa7.17□□□□□ -1.26
RNU4-11P-201ENST00000365287 TMEM106CQ9BVX2 250 aa7.17□□□□□ -1.26
RNU4-11P-201ENST00000365287 NUBP1P53384 320 aa7.15□□□□□ -1.26
RNU4-11P-201ENST00000365287 IRX5P78411 483 aaPredicted RBP7.15□□□□□ -1.26
RNU4-11P-201ENST00000365287 SNPHO15079 494 aa7.14□□□□□ -1.27
RNU4-11P-201ENST00000365287 MMRN1Q13201 1228 aa7.14□□□□□ -1.27
RNU4-11P-201ENST00000365287 FAM212AQ96EL1 285 aa7.14□□□□□ -1.27
RNU4-11P-201ENST00000365287 SPNS2Q8IVW8 549 aa7.13□□□□□ -1.27
RNU4-11P-201ENST00000365287 OCEL1Q9H607 264 aa7.11□□□□□ -1.27
RNU4-11P-201ENST00000365287 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.1□□□□□ -1.27
RNU4-11P-201ENST00000365287 MARVELD3Q96A59 401 aa7.04□□□□□ -1.28
RNU4-11P-201ENST00000365287 EMP3P54852 163 aa7.01□□□□□ -1.29
RNU4-11P-201ENST00000365287 C3orf67Q6ZVT6 689 aa7.01□□□□□ -1.29
RNU4-11P-201ENST00000365287 PYGBP11216 843 aa6.99□□□□□ -1.29
RNU4-11P-201ENST00000365287 PDCD7Q8N8D1 485 aaKnown RBP6.99□□□□□ -1.29
RNU4-11P-201ENST00000365287 L3MBTL3Q96JM7 780 aaPredicted RBP6.99□□□□□ -1.29
RNU4-11P-201ENST00000365287 DCAF8Q5TAQ9 597 aa6.98□□□□□ -1.29
RNU4-11P-201ENST00000365287 PCDHB8Q9UN66 801 aa6.98□□□□□ -1.29
RNU4-11P-201ENST00000365287 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.3
RNU4-11P-201ENST00000365287 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
RNU4-11P-201ENST00000365287 GOLGA2Q08379 1002 aa6.95□□□□□ -1.3
RNU4-11P-201ENST00000365287 MKRN3Q13064 507 aaKnown RBP6.95□□□□□ -1.3
RNU4-11P-201ENST00000365287 ZNF467Q7Z7K2 595 aaPredicted RBP6.95□□□□□ -1.3
RNU4-11P-201ENST00000365287 HS3ST6Q96QI5 342 aa6.95□□□□□ -1.3
RNU4-11P-201ENST00000365287 FAM205CA6NFA0 338 aa6.93□□□□□ -1.3
RNU4-11P-201ENST00000365287 POTEB3A0JP26 581 aa6.92□□□□□ -1.3
RNU4-11P-201ENST00000365287 POTEBQ6S5H4 581 aa6.92□□□□□ -1.3
RNU4-11P-201ENST00000365287 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.91□□□□□ -1.3
RNU4-11P-201ENST00000365287 GSE1Q14687 1217 aa6.9□□□□□ -1.3
RNU4-11P-201ENST00000365287 ILDR1Q86SU0 546 aaPredicted RBP6.89□□□□□ -1.31
RNU4-11P-201ENST00000365287 CHRM1P11229 460 aaPredicted RBP6.88□□□□□ -1.31
RNU4-11P-201ENST00000365287 FBXO3Q9UK99 471 aa6.88□□□□□ -1.31
RNU4-11P-201ENST00000365287 PSEN1P49768 467 aa6.86□□□□□ -1.31
RNU4-11P-201ENST00000365287 FKBP8Q14318 412 aa6.86□□□□□ -1.31
RNU4-11P-201ENST00000365287 HOXB3P14651 431 aaPredicted RBP6.85□□□□□ -1.31
RNU4-11P-201ENST00000365287 G3V3G9 751 aa6.84□□□□□ -1.31
RNU4-11P-201ENST00000365287 HOXB1P14653 301 aaPredicted RBP6.83□□□□□ -1.32
RNU4-11P-201ENST00000365287 PDAP1Q13442 181 aaKnown RBP6.83□□□□□ -1.32
RNU4-11P-201ENST00000365287 DOK7Q18PE1 504 aa6.82□□□□□ -1.32
RNU4-11P-201ENST00000365287 ZNF710Q8N1W2 664 aa6.82□□□□□ -1.32
RNU4-11P-201ENST00000365287 RNF166Q96A37 237 aaPredicted RBP6.82□□□□□ -1.32
RNU4-11P-201ENST00000365287 BOLA1Q9Y3E2 137 aa6.82□□□□□ -1.32
RNU4-11P-201ENST00000365287 KLHL34Q8N239 644 aa6.81□□□□□ -1.32
RNU4-11P-201ENST00000365287 ERBB3P21860 1342 aa6.8□□□□□ -1.32
RNU4-11P-201ENST00000365287 DPY19L2Q6NUT2 758 aa6.8□□□□□ -1.32
RNU4-11P-201ENST00000365287 RIMBP2O15034 1052 aa6.78□□□□□ -1.32
RNU4-11P-201ENST00000365287 VASPP50552 380 aaPredicted RBP6.78□□□□□ -1.32
RNU4-11P-201ENST00000365287 CABP2Q9NPB3 220 aa6.77□□□□□ -1.33
RNU4-11P-201ENST00000365287 MYT1LQ9UL68 1186 aa6.77□□□□□ -1.33
RNU4-11P-201ENST00000365287 PTGER2P43116 358 aa6.76□□□□□ -1.33
RNU4-11P-201ENST00000365287 ZSWIM6Q9HCJ5 1215 aa6.75□□□□□ -1.33
RNU4-11P-201ENST00000365287 VARS2Q5ST30 1063 aaKnown RBP6.74□□□□□ -1.33
RNU4-11P-201ENST00000365287 ZNF687Q8N1G0 1237 aa6.72□□□□□ -1.33
RNU4-11P-201ENST00000365287 MICALL2Q8IY33 904 aa6.67□□□□□ -1.34
RNU4-11P-201ENST00000365287 SPOCK2Q92563 424 aa6.67□□□□□ -1.34
RNU4-11P-201ENST00000365287 GPR153Q6NV75 609 aa6.66□□□□□ -1.34
RNU4-11P-201ENST00000365287 CIZ1Q9ULV3 898 aaPredicted RBP6.66□□□□□ -1.34
RNU4-11P-201ENST00000365287 EFCAB3Q8N7B9 438 aa6.65□□□□□ -1.34
RNU4-11P-201ENST00000365287 TMEM92Q6UXU6 159 aa6.64□□□□□ -1.35
RNU4-11P-201ENST00000365287 TRIM41Q8WV44 630 aa6.64□□□□□ -1.35
RNU4-11P-201ENST00000365287 LSM11P83369 360 aaKnown RBP eCLIP6.61□□□□□ -1.35
RNU4-11P-201ENST00000365287 ANKRD13DQ6ZTN6 518 aa6.61□□□□□ -1.35
RNU4-11P-201ENST00000365287 SOX12O15370 315 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms