RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 AKT1S1Q96B36 256 aa11.25□□□□□ -0.61
RPL39-201ENST00000361575 GSE1Q14687 1217 aa11.24□□□□□ -0.61
RPL39-201ENST00000361575 TAOK2Q9UL54 1235 aa11.23□□□□□ -0.61
RPL39-201ENST00000361575 DNAJC5Q9H3Z4 198 aa11.22□□□□□ -0.61
RPL39-201ENST00000361575 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
RPL39-201ENST00000361575 NKX1-1Q15270 411 aaPredicted RBP11.19□□□□□ -0.62
RPL39-201ENST00000361575 REM2Q8IYK8 340 aaPredicted RBP11.19□□□□□ -0.62
RPL39-201ENST00000361575 CLEC11AQ9Y240 323 aa11.18□□□□□ -0.62
RPL39-201ENST00000361575 DCAF8Q5TAQ9 597 aa11.17□□□□□ -0.62
RPL39-201ENST00000361575 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
RPL39-201ENST00000361575 PRR29P0C7W0 189 aa11.15□□□□□ -0.62
RPL39-201ENST00000361575 RASEFQ8IZ41 740 aa11.15□□□□□ -0.62
RPL39-201ENST00000361575 FAM212AQ96EL1 285 aa11.11□□□□□ -0.63
RPL39-201ENST00000361575 GTPBP6O43824 516 aaPredicted RBP11.1□□□□□ -0.63
RPL39-201ENST00000361575 CHRM1P11229 460 aaPredicted RBP11.1□□□□□ -0.63
RPL39-201ENST00000361575 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
RPL39-201ENST00000361575 TPRNQ4KMQ1 711 aa11.06□□□□□ -0.64
RPL39-201ENST00000361575 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
RPL39-201ENST00000361575 STK25O00506 426 aa11.04□□□□□ -0.64
RPL39-201ENST00000361575 SGIP1Q9BQI5 828 aa11.03□□□□□ -0.64
RPL39-201ENST00000361575 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.01□□□□□ -0.65
RPL39-201ENST00000361575 PYGBP11216 843 aa11.01□□□□□ -0.65
RPL39-201ENST00000361575 ZFP91Q96JP5 570 aaPredicted RBP11.01□□□□□ -0.65
RPL39-201ENST00000361575 BCL11BQ9C0K0 894 aaPredicted RBP10.98□□□□□ -0.65
RPL39-201ENST00000361575 STK24Q9Y6E0 443 aa10.96□□□□□ -0.65
RPL39-201ENST00000361575 CHADLQ6NUI6 762 aa10.93□□□□□ -0.66
RPL39-201ENST00000361575 NBR1Q14596 966 aa10.89□□□□□ -0.67
RPL39-201ENST00000361575 TSPYL2Q9H2G4 693 aaPredicted RBP10.86□□□□□ -0.67
RPL39-201ENST00000361575 FARP1Q9Y4F1 1045 aaPredicted RBP10.86□□□□□ -0.67
RPL39-201ENST00000361575 CCDC61Q9Y6R9 512 aa10.82□□□□□ -0.68
RPL39-201ENST00000361575 ZNF467Q7Z7K2 595 aaPredicted RBP10.81□□□□□ -0.68
RPL39-201ENST00000361575 RYDENQ9NUL5 291 aaKnown RBP10.81□□□□□ -0.68
RPL39-201ENST00000361575 PCDHB8Q9UN66 801 aa10.81□□□□□ -0.68
RPL39-201ENST00000361575 PCDHB13Q9Y5F0 798 aa10.81□□□□□ -0.68
RPL39-201ENST00000361575 CADPS2Q86UW7 1296 aa10.8□□□□□ -0.68
RPL39-201ENST00000361575 PDAP1Q13442 181 aaKnown RBP10.78□□□□□ -0.68
RPL39-201ENST00000361575 PRKAR2AP13861 404 aaKnown RBP10.75□□□□□ -0.69
RPL39-201ENST00000361575 FXR2P51116 673 aaKnown RBP eCLIP10.75□□□□□ -0.69
RPL39-201ENST00000361575 MFRPQ9BY79 579 aa10.75□□□□□ -0.69
RPL39-201ENST00000361575 ZNF579Q8NAF0 562 aaKnown RBP10.73□□□□□ -0.69
RPL39-201ENST00000361575 PSEN1P49768 467 aa10.72□□□□□ -0.69
RPL39-201ENST00000361575 IFNL1Q8IU54 200 aa10.69□□□□□ -0.7
RPL39-201ENST00000361575 KCNV2Q8TDN2 545 aa10.69□□□□□ -0.7
RPL39-201ENST00000361575 PPP1R37O75864 691 aa10.66□□□□□ -0.7
RPL39-201ENST00000361575 MAP3K13O43283 966 aa10.65□□□□□ -0.7
RPL39-201ENST00000361575 P3H3Q8IVL6 736 aa10.65□□□□□ -0.7
RPL39-201ENST00000361575 FBXO22Q8NEZ5 403 aa10.65□□□□□ -0.7
RPL39-201ENST00000361575 KIF12Q96FN5 646 aa10.65□□□□□ -0.7
RPL39-201ENST00000361575 PIP4P2Q8N4L2 257 aa10.62□□□□□ -0.71
RPL39-201ENST00000361575 EFCAB3Q8N7B9 438 aa10.62□□□□□ -0.71
RPL39-201ENST00000361575 CABP2Q9NPB3 220 aa10.59□□□□□ -0.71
RPL39-201ENST00000361575 PHF8Q9UPP1 1060 aa10.59□□□□□ -0.71
RPL39-201ENST00000361575 CHRDL2Q6WN34 429 aa10.58□□□□□ -0.72
RPL39-201ENST00000361575 WDR70Q9NW82 654 aa10.58□□□□□ -0.72
RPL39-201ENST00000361575 PAK3O75914 559 aaPredicted RBP10.56□□□□□ -0.72
RPL39-201ENST00000361575 SOX12O15370 315 aa10.55□□□□□ -0.72
RPL39-201ENST00000361575 NLRP6P59044 892 aa10.55□□□□□ -0.72
RPL39-201ENST00000361575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.54□□□□□ -0.72
RPL39-201ENST00000361575 MS4A4AQ96JQ5 239 aa10.53□□□□□ -0.72
RPL39-201ENST00000361575 LMOD2Q6P5Q4 547 aa10.52□□□□□ -0.73
RPL39-201ENST00000361575 PHF12Q96QT6 1004 aa10.52□□□□□ -0.73
RPL39-201ENST00000361575 NCKAP5LQ9HCH0 1330 aa10.51□□□□□ -0.73
RPL39-201ENST00000361575 ZRANB1Q9UGI0 708 aa10.5□□□□□ -0.73
RPL39-201ENST00000361575 CD44P16070 742 aaKnown RBP10.48□□□□□ -0.73
RPL39-201ENST00000361575 ARHGEF1Q92888 912 aaKnown RBP10.48□□□□□ -0.73
RPL39-201ENST00000361575 E2F4Q16254 413 aa10.47□□□□□ -0.73
RPL39-201ENST00000361575 TRPC6Q9Y210 931 aa10.47□□□□□ -0.73
RPL39-201ENST00000361575 SEMA3EO15041 775 aa10.43□□□□□ -0.74
RPL39-201ENST00000361575 MFSD10Q14728 455 aa10.43□□□□□ -0.74
RPL39-201ENST00000361575 CRISPLD2Q9H0B8 497 aa10.43□□□□□ -0.74
RPL39-201ENST00000361575 TESPA1A2RU30 521 aaPredicted RBP10.42□□□□□ -0.74
RPL39-201ENST00000361575 MS4A3Q96HJ5 214 aa10.41□□□□□ -0.74
RPL39-201ENST00000361575 TMEM106CQ9BVX2 250 aa10.41□□□□□ -0.74
RPL39-201ENST00000361575 LARP6Q9BRS8 491 aaKnown RBP10.4□□□□□ -0.74
RPL39-201ENST00000361575 ZC3H15Q8WU90 426 aaKnown RBP10.38□□□□□ -0.75
RPL39-201ENST00000361575 TIMELESSQ9UNS1 1208 aa10.38□□□□□ -0.75
RPL39-201ENST00000361575 PDE4AP27815 886 aa10.36□□□□□ -0.75
RPL39-201ENST00000361575 ILDR1Q86SU0 546 aaPredicted RBP10.36□□□□□ -0.75
RPL39-201ENST00000361575 C19orf67A6NJJ6 358 aa10.35□□□□□ -0.75
RPL39-201ENST00000361575 CAMK2BQ13554 666 aa10.35□□□□□ -0.75
RPL39-201ENST00000361575 TMEM132AQ24JP5 1023 aa10.35□□□□□ -0.75
RPL39-201ENST00000361575 ARIH1Q9Y4X5 557 aaPredicted RBP10.35□□□□□ -0.75
RPL39-201ENST00000361575 GTF3C3Q9Y5Q9 886 aa10.34□□□□□ -0.75
RPL39-201ENST00000361575 DDX27Q96GQ7 796 aaKnown RBP10.33□□□□□ -0.76
RPL39-201ENST00000361575 TULP1O00294 542 aaPredicted RBP10.32□□□□□ -0.76
RPL39-201ENST00000361575 BRPF1P55201 1214 aaPredicted RBP10.32□□□□□ -0.76
RPL39-201ENST00000361575 TTLL13PA6NNM8 815 aa10.31□□□□□ -0.76
RPL39-201ENST00000361575 GOLGA2Q08379 1002 aa10.31□□□□□ -0.76
RPL39-201ENST00000361575 TIE1P35590 1138 aa10.29□□□□□ -0.76
RPL39-201ENST00000361575 MKRN3Q13064 507 aaKnown RBP10.29□□□□□ -0.76
RPL39-201ENST00000361575 BMP2KQ9NSY1 1161 aaPredicted RBP10.28□□□□□ -0.76
RPL39-201ENST00000361575 SLC24A3Q9HC58 644 aa10.27□□□□□ -0.77
RPL39-201ENST00000361575 ZMYND10O75800 440 aa10.26□□□□□ -0.77
RPL39-201ENST00000361575 DPY19L2Q6NUT2 758 aa10.24□□□□□ -0.77
RPL39-201ENST00000361575 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.24□□□□□ -0.77
RPL39-201ENST00000361575 GALR2O43603 387 aaPredicted RBP10.23□□□□□ -0.77
RPL39-201ENST00000361575 MLLT3P42568 568 aaPredicted RBP10.23□□□□□ -0.77
RPL39-201ENST00000361575 PPP1R15BQ5SWA1 713 aa10.23□□□□□ -0.77
RPL39-201ENST00000361575 GPHNQ9NQX3 736 aaPredicted RBP10.23□□□□□ -0.77
RPL39-201ENST00000361575 TRIM35Q9UPQ4 493 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms