RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 LMOD2Q6P5Q4 547 aa11.03□□□□□ -0.64
CTNND1-202ENST00000361332 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
CTNND1-202ENST00000361332 P3H3Q8IVL6 736 aa11.02□□□□□ -0.64
CTNND1-202ENST00000361332 ERICH6BQ5W0A0 696 aa11.02□□□□□ -0.65
CTNND1-202ENST00000361332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.02□□□□□ -0.651e-8■■□□□ 13.5
CTNND1-202ENST00000361332 NAP1L5Q96NT1 182 aaPredicted RBP11.01□□□□□ -0.65
CTNND1-202ENST00000361332 MYO15BQ96JP2 1530 aa11.01□□□□□ -0.65
CTNND1-202ENST00000361332 ARID4BQ4LE39 1312 aaPredicted RBP11□□□□□ -0.65
CTNND1-202ENST00000361332 FAM9BQ8IZU0 186 aa11□□□□□ -0.65
CTNND1-202ENST00000361332 CSRNP3Q8WYN3 585 aa10.98□□□□□ -0.65
CTNND1-202ENST00000361332 WDR43Q15061 677 aaKnown RBP eCLIP10.98□□□□□ -0.653e-9■■■□□ 15.6
CTNND1-202ENST00000361332 PTMAP06454 111 aaKnown RBP10.97□□□□□ -0.65
CTNND1-202ENST00000361332 IRX6P78412 446 aaPredicted RBP10.97□□□□□ -0.65
CTNND1-202ENST00000361332 ZCCHC6Q5VYS8 1495 aaKnown RBP10.96□□□□□ -0.65
CTNND1-202ENST00000361332 DDRGK1Q96HY6 314 aa10.96□□□□□ -0.66
CTNND1-202ENST00000361332 DDX10Q13206 875 aaKnown RBP10.95□□□□□ -0.66
CTNND1-202ENST00000361332 NAP1L2Q9ULW6 460 aaPredicted RBP10.95□□□□□ -0.66
CTNND1-202ENST00000361332 DNTTIP2Q5QJE6 756 aaKnown RBP10.94□□□□□ -0.66
CTNND1-202ENST00000361332 ABCC9O60706 1549 aa10.93□□□□□ -0.66
CTNND1-202ENST00000361332 AMER1Q5JTC6 1135 aaPredicted RBP10.93□□□□□ -0.66
CTNND1-202ENST00000361332 PDE4CQ08493 712 aa10.92□□□□□ -0.66
CTNND1-202ENST00000361332 BECN1Q14457 450 aa10.92□□□□□ -0.66
CTNND1-202ENST00000361332 PABPN1Q86U42 306 aaKnown RBP eCLIP10.92□□□□□ -0.664e-7■□□□□ 8.4
CTNND1-202ENST00000361332 FGD1P98174 961 aa10.91□□□□□ -0.66
CTNND1-202ENST00000361332 PLCB2Q00722 1185 aa10.9□□□□□ -0.66
CTNND1-202ENST00000361332 PPM1GO15355 546 aaPredicted RBP10.89□□□□□ -0.67
CTNND1-202ENST00000361332 FBXO3Q9UK99 471 aa10.89□□□□□ -0.67
CTNND1-202ENST00000361332 GOLGA6L22H0YM25 854 aa10.89□□□□□ -0.67
CTNND1-202ENST00000361332 MIER1Q8N108 512 aa10.88□□□□□ -0.67
CTNND1-202ENST00000361332 GOLGA6L6A8MZA4 724 aa10.87□□□□□ -0.67
CTNND1-202ENST00000361332 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-202ENST00000361332 CASC1Q6TDU7 716 aa10.87□□□□□ -0.67
CTNND1-202ENST00000361332 TMX4Q9H1E5 349 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-202ENST00000361332 OS9Q13438 667 aaPredicted RBP10.86□□□□□ -0.67
CTNND1-202ENST00000361332 PNNQ9H307 717 aaKnown RBP10.86□□□□□ -0.67
CTNND1-202ENST00000361332 TMC1Q8TDI8 760 aa10.85□□□□□ -0.67
CTNND1-202ENST00000361332 KDM2AQ9Y2K7 1162 aa10.85□□□□□ -0.67
CTNND1-202ENST00000361332 LAS1LQ9Y4W2 734 aaKnown RBP10.85□□□□□ -0.67
CTNND1-202ENST00000361332 NOC3LQ8WTT2 800 aaKnown RBP10.84□□□□□ -0.67
CTNND1-202ENST00000361332 ANO8Q9HCE9 1232 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-202ENST00000361332 DEKP35659 375 aaKnown RBP10.83□□□□□ -0.68
CTNND1-202ENST00000361332 NOP58Q9Y2X3 529 aaKnown RBP10.82□□□□□ -0.68
CTNND1-202ENST00000361332 KCNJ4P48050 445 aa10.82□□□□□ -0.68
CTNND1-202ENST00000361332 MRS2Q9HD23 443 aa10.82□□□□□ -0.68
CTNND1-202ENST00000361332 TRHP20396 242 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-202ENST00000361332 KIAA2012Q0VF49 1180 aa10.81□□□□□ -0.68
CTNND1-202ENST00000361332 TONSLQ96HA7 1378 aa10.81□□□□□ -0.68
CTNND1-202ENST00000361332 CCDC180Q9P1Z9 1646 aa10.8□□□□□ -0.68
CTNND1-202ENST00000361332 EIF4G2P78344 907 aaKnown RBP eCLIP10.8□□□□□ -0.68
CTNND1-202ENST00000361332 CNKSR2Q8WXI2 1034 aa10.8□□□□□ -0.68
CTNND1-202ENST00000361332 NRDCO43847 1150 aa10.79□□□□□ -0.68
CTNND1-202ENST00000361332 SCRIBQ14160 1630 aa10.79□□□□□ -0.68
CTNND1-202ENST00000361332 CCDC9Q9Y3X0 531 aaKnown RBP10.79□□□□□ -0.68
CTNND1-202ENST00000361332 G3V3G9 751 aa10.78□□□□□ -0.68
CTNND1-202ENST00000361332 DCAF8Q5TAQ9 597 aa10.78□□□□□ -0.68
CTNND1-202ENST00000361332 L1TD1Q5T7N2 865 aaKnown RBP10.78□□□□□ -0.68
CTNND1-202ENST00000361332 CHAF1AQ13111 956 aaPredicted RBP10.76□□□□□ -0.69
CTNND1-202ENST00000361332 GNL2Q13823 731 aaKnown RBP10.76□□□□□ -0.69
CTNND1-202ENST00000361332 WWC1Q8IX03 1113 aa10.75□□□□□ -0.69
CTNND1-202ENST00000361332 A0A0U1RQG5 324 aaPredicted RBP10.75□□□□□ -0.69
CTNND1-202ENST00000361332 GOLGA6L4A6NEF3 574 aa10.74□□□□□ -0.69
CTNND1-202ENST00000361332 ZNF330Q9Y3S2 320 aaPredicted RBP10.74□□□□□ -0.69
CTNND1-202ENST00000361332 CHIC2Q9UKJ5 165 aa10.73□□□□□ -0.69
CTNND1-202ENST00000361332 SUPT16HQ9Y5B9 1047 aaKnown RBP10.73□□□□□ -0.69
CTNND1-202ENST00000361332 FTSJ3Q8IY81 847 aaKnown RBP10.72□□□□□ -0.69
CTNND1-202ENST00000361332 MSNP26038 577 aaKnown RBP10.72□□□□□ -0.69
CTNND1-202ENST00000361332 CFAP53Q96M91 514 aa10.72□□□□□ -0.69
CTNND1-202ENST00000361332 KCNH8Q96L42 1107 aa10.71□□□□□ -0.69
CTNND1-202ENST00000361332 TSPY4P0CV99 314 aa10.71□□□□□ -0.7
CTNND1-202ENST00000361332 TSPY10P0CW01 314 aa10.71□□□□□ -0.7
CTNND1-202ENST00000361332 VPS53Q5VIR6 699 aa10.7□□□□□ -0.7
CTNND1-202ENST00000361332 DCAF8L1A6NGE4 600 aa10.7□□□□□ -0.7
CTNND1-202ENST00000361332 DRC7Q8IY82 874 aa10.7□□□□□ -0.7
CTNND1-202ENST00000361332 SOX12O15370 315 aa10.69□□□□□ -0.7
CTNND1-202ENST00000361332 TNNT3P45378 269 aaPredicted RBP10.68□□□□□ -0.7
CTNND1-202ENST00000361332 HIRIP3Q9BW71 556 aaPredicted RBP10.68□□□□□ -0.7
CTNND1-202ENST00000361332 PPP4R2Q9NY27 417 aa10.68□□□□□ -0.7
CTNND1-202ENST00000361332 NEUROD2Q15784 382 aa10.68□□□□□ -0.7
CTNND1-202ENST00000361332 CEP89Q96ST8 783 aa10.68□□□□□ -0.7
CTNND1-202ENST00000361332 ARID3AQ99856 593 aa10.68□□□□□ -0.7
CTNND1-202ENST00000361332 MAPK8IP3Q9UPT6 1336 aa10.68□□□□□ -0.7
CTNND1-202ENST00000361332 POGKQ9P215 609 aa10.67□□□□□ -0.7
CTNND1-202ENST00000361332 CEP162Q5TB80 1403 aa10.66□□□□□ -0.7
CTNND1-202ENST00000361332 CLIP1P30622 1438 aa10.66□□□□□ -0.7
CTNND1-202ENST00000361332 RSF1Q96T23 1441 aaPredicted RBP10.66□□□□□ -0.7
CTNND1-202ENST00000361332 RBM19Q9Y4C8 960 aaKnown RBP10.65□□□□□ -0.71
CTNND1-202ENST00000361332 CSB-PGBD3P0DP91 1061 aa10.64□□□□□ -0.71
CTNND1-202ENST00000361332 CWC22Q9HCG8 908 aaKnown RBP10.64□□□□□ -0.71
CTNND1-202ENST00000361332 HSP90AB1P08238 724 aaKnown RBP10.63□□□□□ -0.71
CTNND1-202ENST00000361332 KLHL34Q8N239 644 aa10.63□□□□□ -0.71
CTNND1-202ENST00000361332 PHF23Q9BUL5 403 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-202ENST00000361332 MSH5O43196 834 aa10.63□□□□□ -0.71
CTNND1-202ENST00000361332 RGS3P49796 1198 aa10.63□□□□□ -0.71
CTNND1-202ENST00000361332 AEBP2Q6ZN18 517 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-202ENST00000361332 RASSF8Q8NHQ8 419 aa10.62□□□□□ -0.71
CTNND1-202ENST00000361332 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
CTNND1-202ENST00000361332 CREBRFQ8IUR6 639 aa10.61□□□□□ -0.71
CTNND1-202ENST00000361332 MARCH6O60337 910 aa10.61□□□□□ -0.71
CTNND1-202ENST00000361332 MLECQ14165 292 aa10.6□□□□□ -0.71
CTNND1-202ENST00000361332 RGL3Q3MIN7 710 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms