RNA–Protein interactions for RNA: ENST00000360047.9

PDE4D-205, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 3,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-205ENST00000360047 POLA1P09884 1462 aaPredicted RBP7.87□□□□□ -1.15
PDE4D-205ENST00000360047 IFT140Q96RY7 1462 aa7.87□□□□□ -1.15
PDE4D-205ENST00000360047 RAD54L2Q9Y4B4 1467 aa7.86□□□□□ -1.15
PDE4D-205ENST00000360047 TULP1O00294 542 aaPredicted RBP7.86□□□□□ -1.15
PDE4D-205ENST00000360047 SYNJ1O43426 1573 aa7.85□□□□□ -1.15
PDE4D-205ENST00000360047 TOP2BQ02880 1626 aa7.85□□□□□ -1.15
PDE4D-205ENST00000360047 TDRD9Q8NDG6 1382 aaKnown RBP7.85□□□□□ -1.15
PDE4D-205ENST00000360047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.84□□□□□ -1.15
PDE4D-205ENST00000360047 HNRNPUL2Q1KMD3 747 aaKnown RBP7.84□□□□□ -1.15
PDE4D-205ENST00000360047 BIVM-ERCC5R4GMW8 1640 aa7.82□□□□□ -1.16
PDE4D-205ENST00000360047 CAPN15O75808 1086 aa7.82□□□□□ -1.16
PDE4D-205ENST00000360047 AQRO60306 1485 aaKnown RBP eCLIP7.82□□□□□ -1.16
PDE4D-205ENST00000360047 ZNF608Q9ULD9 1512 aaPredicted RBP7.81□□□□□ -1.16
PDE4D-205ENST00000360047 FBLN2P98095 1184 aa7.81□□□□□ -1.16
PDE4D-205ENST00000360047 FAM9AQ8IZU1 332 aaPredicted RBP7.81□□□□□ -1.16
PDE4D-205ENST00000360047 ABCA10Q8WWZ4 1543 aa7.79□□□□□ -1.16
PDE4D-205ENST00000360047 KIF27Q86VH2 1401 aa7.79□□□□□ -1.16
PDE4D-205ENST00000360047 TARBP1Q13395 1621 aaKnown RBP7.79□□□□□ -1.16
PDE4D-205ENST00000360047 AMER1Q5JTC6 1135 aaPredicted RBP7.78□□□□□ -1.16
PDE4D-205ENST00000360047 GAPVD1Q14C86 1478 aa7.78□□□□□ -1.16
PDE4D-205ENST00000360047 CHMP7Q8WUX9 453 aaPredicted RBP7.77□□□□□ -1.17
PDE4D-205ENST00000360047 DSG3P32926 999 aa7.76□□□□□ -1.17
PDE4D-205ENST00000360047 RANGAP1P46060 587 aaPredicted RBP7.76□□□□□ -1.17
PDE4D-205ENST00000360047 GRIN2BQ13224 1484 aa7.76□□□□□ -1.17
PDE4D-205ENST00000360047 ZNF219Q9P2Y4 722 aaPredicted RBP7.75□□□□□ -1.17
PDE4D-205ENST00000360047 SAMD1Q6SPF0 538 aaPredicted RBP7.74□□□□□ -1.17
PDE4D-205ENST00000360047 EIF4G3O43432 1585 aaKnown RBP7.74□□□□□ -1.17
PDE4D-205ENST00000360047 SLC4A2P04920 1241 aa7.74□□□□□ -1.17
PDE4D-205ENST00000360047 SPINK5Q9NQ38 1064 aaPredicted RBP7.74□□□□□ -1.17
PDE4D-205ENST00000360047 CSRNP3Q8WYN3 585 aa7.74□□□□□ -1.17
PDE4D-205ENST00000360047 IGF1RP08069 1367 aa7.73□□□□□ -1.17
PDE4D-205ENST00000360047 WDR97A6NE52 1622 aa7.73□□□□□ -1.17
PDE4D-205ENST00000360047 SNAPC4Q5SXM2 1469 aa7.72□□□□□ -1.17
PDE4D-205ENST00000360047 OSCARQ8IYS5 282 aa7.72□□□□□ -1.17
PDE4D-205ENST00000360047 PODXL2Q9NZ53 605 aa7.72□□□□□ -1.17
PDE4D-205ENST00000360047 RUSC2Q8N2Y8 1516 aa7.72□□□□□ -1.17
PDE4D-205ENST00000360047 CARMIL1Q5VZK9 1371 aa7.71□□□□□ -1.18
PDE4D-205ENST00000360047 EEA1Q15075 1411 aa7.7□□□□□ -1.18
PDE4D-205ENST00000360047 MAGI1Q96QZ7 1491 aaPredicted RBP7.7□□□□□ -1.18
PDE4D-205ENST00000360047 ABCA5Q8WWZ7 1642 aa7.7□□□□□ -1.18
PDE4D-205ENST00000360047 ERICH3Q5RHP9 1530 aa7.7□□□□□ -1.18
PDE4D-205ENST00000360047 FHAD1B1AJZ9 1412 aa7.7□□□□□ -1.18
PDE4D-205ENST00000360047 SYNJ2O15056 1496 aa7.68□□□□□ -1.18
PDE4D-205ENST00000360047 PBRM1Q86U86 1689 aa7.68□□□□□ -1.18
PDE4D-205ENST00000360047 TAOK2Q9UL54 1235 aa7.67□□□□□ -1.18
PDE4D-205ENST00000360047 UBTFP17480 764 aaKnown RBP7.66□□□□□ -1.18
PDE4D-205ENST00000360047 TRHP20396 242 aaPredicted RBP7.65□□□□□ -1.18
PDE4D-205ENST00000360047 HOMEZQ8IX15 550 aa7.65□□□□□ -1.18
PDE4D-205ENST00000360047 RAPGEF2Q9Y4G8 1499 aa7.65□□□□□ -1.19
PDE4D-205ENST00000360047 ADAMTS12P58397 1594 aa7.64□□□□□ -1.19
PDE4D-205ENST00000360047 GRIN2AQ12879 1464 aa7.64□□□□□ -1.19
PDE4D-205ENST00000360047 CUL7Q14999 1698 aa7.63□□□□□ -1.19
PDE4D-205ENST00000360047 MYCNP04198 464 aaPredicted RBP7.62□□□□□ -1.19
PDE4D-205ENST00000360047 CHD1O14646 1710 aa7.61□□□□□ -1.19
PDE4D-205ENST00000360047 PRXQ9BXM0 1461 aa7.61□□□□□ -1.19
PDE4D-205ENST00000360047 JPH4Q96JJ6 628 aa7.61□□□□□ -1.19
PDE4D-205ENST00000360047 TPRNQ4KMQ1 711 aa7.6□□□□□ -1.19
PDE4D-205ENST00000360047 NUP160Q12769 1436 aa7.59□□□□□ -1.19
PDE4D-205ENST00000360047 LOC105371045A0A1W2PR82 267 aa7.58□□□□□ -1.2
PDE4D-205ENST00000360047 GOLGA3Q08378 1498 aa7.58□□□□□ -1.2
PDE4D-205ENST00000360047 KIAA0586Q9BVV6 1533 aa7.58□□□□□ -1.2
PDE4D-205ENST00000360047 CEP170Q5SW79 1584 aa7.56□□□□□ -1.2
PDE4D-205ENST00000360047 ABCB7O75027 752 aa7.56□□□□□ -1.2
PDE4D-205ENST00000360047 PPARGC1BQ86YN6 1023 aaKnown RBP7.56□□□□□ -1.2
PDE4D-205ENST00000360047 RBM42Q9BTD8 480 aaKnown RBP7.56□□□□□ -1.2
PDE4D-205ENST00000360047 P3H3Q8IVL6 736 aa7.55□□□□□ -1.2
PDE4D-205ENST00000360047 KIF21BO75037 1637 aa7.55□□□□□ -1.2
PDE4D-205ENST00000360047 ERCC6L2Q5T890 1561 aa7.55□□□□□ -1.2
PDE4D-205ENST00000360047 PRG4Q92954 1404 aaPredicted RBP7.55□□□□□ -1.2
PDE4D-205ENST00000360047 CYB5RLQ6IPT4 315 aa7.54□□□□□ -1.2
PDE4D-205ENST00000360047 CARMIL2Q6F5E8 1435 aa7.54□□□□□ -1.2
PDE4D-205ENST00000360047 CLASP1Q7Z460 1538 aa7.54□□□□□ -1.2
PDE4D-205ENST00000360047 POTEHQ6S545 545 aa7.53□□□□□ -1.2
PDE4D-205ENST00000360047 IQGAP2Q13576 1575 aa7.52□□□□□ -1.2
PDE4D-205ENST00000360047 SLC4A1APQ9BWU0 796 aaKnown RBP7.52□□□□□ -1.21
PDE4D-205ENST00000360047 TNIKQ9UKE5 1360 aa7.51□□□□□ -1.21
PDE4D-205ENST00000360047 ARHGEF11O15085 1522 aa7.5□□□□□ -1.21
PDE4D-205ENST00000360047 NPM2Q86SE8 214 aaKnown RBP7.49□□□□□ -1.21
PDE4D-205ENST00000360047 PTPRGP23470 1445 aa7.49□□□□□ -1.21
PDE4D-205ENST00000360047 ATP1B4Q9UN42 357 aaPredicted RBP7.49□□□□□ -1.21
PDE4D-205ENST00000360047 CTTNBP2Q8WZ74 1663 aa7.49□□□□□ -1.21
PDE4D-205ENST00000360047 FOXD4L1Q9NU39 408 aa7.49□□□□□ -1.21
PDE4D-205ENST00000360047 NPM1P06748 294 aaKnown RBP eCLIP7.48□□□□□ -1.21
PDE4D-205ENST00000360047 UGGT2Q9NYU1 1516 aa7.48□□□□□ -1.21
PDE4D-205ENST00000360047 CLIP1P30622 1438 aa7.47□□□□□ -1.21
PDE4D-205ENST00000360047 RIMBP3CA6NJZ7 1639 aa7.47□□□□□ -1.21
PDE4D-205ENST00000360047 RIMBP3BA6NNM3 1639 aa7.47□□□□□ -1.21
PDE4D-205ENST00000360047 RIMBP3Q9UFD9 1639 aa7.47□□□□□ -1.21
PDE4D-205ENST00000360047 C14orf37Q86TY3 774 aa7.47□□□□□ -1.21
PDE4D-205ENST00000360047 ZBTB12Q9Y330 459 aaPredicted RBP7.46□□□□□ -1.21
PDE4D-205ENST00000360047 SHROOM2Q13796 1616 aa7.46□□□□□ -1.21
PDE4D-205ENST00000360047 PDIA4P13667 645 aaKnown RBP7.46□□□□□ -1.22
PDE4D-205ENST00000360047 DISP1Q96F81 1524 aa7.46□□□□□ -1.22
PDE4D-205ENST00000360047 FHOD3Q2V2M9 1422 aa7.45□□□□□ -1.22
PDE4D-205ENST00000360047 GTF3C3Q9Y5Q9 886 aa7.45□□□□□ -1.22
PDE4D-205ENST00000360047 ARAP1Q96P48 1450 aa7.45□□□□□ -1.22
PDE4D-205ENST00000360047 CEP162Q5TB80 1403 aa7.44□□□□□ -1.22
PDE4D-205ENST00000360047 ARID3CA6NKF2 412 aa7.44□□□□□ -1.22
PDE4D-205ENST00000360047 POLA2Q14181 598 aa7.44□□□□□ -1.22
PDE4D-205ENST00000360047 PCGF6Q9BYE7 350 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms