RNA–Protein interactions for RNA: ENST00000360047.9

PDE4D-205, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 3,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-205ENST00000360047 AEBP2Q6ZN18 517 aaPredicted RBP12.95□□□□□ -0.34
PDE4D-205ENST00000360047 CHIC1Q5VXU3 224 aa12.38□□□□□ -0.43
PDE4D-205ENST00000360047 SENP3Q9H4L4 574 aaPredicted RBP11.25□□□□□ -0.61
PDE4D-205ENST00000360047 PHF23Q9BUL5 403 aaPredicted RBP11□□□□□ -0.65
PDE4D-205ENST00000360047 NISCHQ9Y2I1 1504 aa10.94□□□□□ -0.66
PDE4D-205ENST00000360047 FOXD1Q16676 465 aa10.36□□□□□ -0.75
PDE4D-205ENST00000360047 PLPPR3Q6T4P5 718 aa9.93□□□□□ -0.82
PDE4D-205ENST00000360047 MSH5O43196 834 aa9.88□□□□□ -0.83
PDE4D-205ENST00000360047 PIAS4Q8N2W9 510 aaPredicted RBP9.71□□□□□ -0.85
PDE4D-205ENST00000360047 CCDC180Q9P1Z9 1646 aa9.61□□□□□ -0.87
PDE4D-205ENST00000360047 POTEDQ86YR6 584 aa9.59□□□□□ -0.87
PDE4D-205ENST00000360047 ADRA2BP18089 450 aa9.57□□□□□ -0.88
PDE4D-205ENST00000360047 PPP6R1Q9UPN7 881 aa9.57□□□□□ -0.88
PDE4D-205ENST00000360047 ABCC9O60706 1549 aa9.41□□□□□ -0.9
PDE4D-205ENST00000360047 SLC24A1O60721 1099 aa9.32□□□□□ -0.92
PDE4D-205ENST00000360047 DCAF8L2P0C7V8 631 aa9.29□□□□□ -0.92
PDE4D-205ENST00000360047 ZCCHC6Q5VYS8 1495 aaKnown RBP9.11□□□□□ -0.95
PDE4D-205ENST00000360047 NACADO15069 1562 aa9.06□□□□□ -0.96
PDE4D-205ENST00000360047 RB1CC1Q8TDY2 1594 aa9.05□□□□□ -0.96
PDE4D-205ENST00000360047 DCAF1Q9Y4B6 1507 aa9.02□□□□□ -0.97
PDE4D-205ENST00000360047 MYO15BQ96JP2 1530 aa9□□□□□ -0.97
PDE4D-205ENST00000360047 SCAF1Q9H7N4 1312 aaKnown RBP8.99□□□□□ -0.97
PDE4D-205ENST00000360047 DMRT2Q9Y5R5 561 aa8.88□□□□□ -0.99
PDE4D-205ENST00000360047 PABPN1Q86U42 306 aaKnown RBP eCLIP8.87□□□□□ -0.99
PDE4D-205ENST00000360047 SCRIBQ14160 1630 aa8.85□□□□□ -0.99
PDE4D-205ENST00000360047 SHROOM4Q9ULL8 1493 aa8.83□□□□□ -1
PDE4D-205ENST00000360047 MAPK8IP2Q13387 824 aaPredicted RBP8.77□□□□□ -1.01
PDE4D-205ENST00000360047 UNC13AQ9UPW8 1703 aa8.75□□□□□ -1.01
PDE4D-205ENST00000360047 BICRAQ9NZM4 1560 aa8.72□□□□□ -1.01
PDE4D-205ENST00000360047 PRKCSHP14314 528 aaPredicted RBP8.7□□□□□ -1.02
PDE4D-205ENST00000360047 PPP4R3CPQ6ZMV5 832 aa8.64□□□□□ -1.03
PDE4D-205ENST00000360047 DNAJC5Q9H3Z4 198 aa8.64□□□□□ -1.03
PDE4D-205ENST00000360047 CNKSR2Q8WXI2 1034 aa8.55□□□□□ -1.04
PDE4D-205ENST00000360047 DAXXQ9UER7 740 aaPredicted RBP8.54□□□□□ -1.04
PDE4D-205ENST00000360047 HOXD11P31277 338 aaPredicted RBP8.54□□□□□ -1.04
PDE4D-205ENST00000360047 MYT1Q01538 1121 aa8.54□□□□□ -1.04
PDE4D-205ENST00000360047 CECR2Q9BXF3 1484 aa8.52□□□□□ -1.04
PDE4D-205ENST00000360047 DNAJC5BQ9UF47 199 aa8.52□□□□□ -1.05
PDE4D-205ENST00000360047 EIF4G1Q04637 1599 aaKnown RBP8.51□□□□□ -1.05
PDE4D-205ENST00000360047 PELP1Q8IZL8 1130 aaKnown RBP8.5□□□□□ -1.05
PDE4D-205ENST00000360047 RNF216Q9NWF9 866 aaPredicted RBP8.48□□□□□ -1.05
PDE4D-205ENST00000360047 BAZ1AQ9NRL2 1556 aaPredicted RBP8.48□□□□□ -1.05
PDE4D-205ENST00000360047 DCAF8L1A6NGE4 600 aa8.47□□□□□ -1.05
PDE4D-205ENST00000360047 APLP2Q06481 763 aa8.47□□□□□ -1.05
PDE4D-205ENST00000360047 CC2D2AQ9P2K1 1620 aa8.45□□□□□ -1.06
PDE4D-205ENST00000360047 SMARCA4P51532 1647 aa8.44□□□□□ -1.06
PDE4D-205ENST00000360047 CACNB1Q02641 598 aaPredicted RBP8.44□□□□□ -1.06
PDE4D-205ENST00000360047 MROH2BQ7Z745 1585 aa8.43□□□□□ -1.06
PDE4D-205ENST00000360047 NCBP3Q53F19 620 aaKnown RBP8.42□□□□□ -1.06
PDE4D-205ENST00000360047 TTBK1Q5TCY1 1321 aaPredicted RBP8.42□□□□□ -1.06
PDE4D-205ENST00000360047 SUPT5HO00267 1087 aaKnown RBP8.42□□□□□ -1.06
PDE4D-205ENST00000360047 EHMT2Q96KQ7 1210 aa8.41□□□□□ -1.06
PDE4D-205ENST00000360047 RSF1Q96T23 1441 aaPredicted RBP8.4□□□□□ -1.06
PDE4D-205ENST00000360047 ATAD2BQ9ULI0 1458 aa8.4□□□□□ -1.06
PDE4D-205ENST00000360047 SMARCA2P51531 1590 aa8.39□□□□□ -1.07
PDE4D-205ENST00000360047 NCAPD3P42695 1498 aa8.37□□□□□ -1.07
PDE4D-205ENST00000360047 BAZ1BQ9UIG0 1483 aaKnown RBP8.36□□□□□ -1.07
PDE4D-205ENST00000360047 WIZO95785 1651 aa8.34□□□□□ -1.08
PDE4D-205ENST00000360047 RNF39Q9H2S5 420 aa8.33□□□□□ -1.08
PDE4D-205ENST00000360047 ERICH6Q7L0X2 663 aa8.33□□□□□ -1.08
PDE4D-205ENST00000360047 PEG3Q9GZU2 1588 aa8.32□□□□□ -1.08
PDE4D-205ENST00000360047 HMGXB3Q12766 1538 aa8.31□□□□□ -1.08
PDE4D-205ENST00000360047 C1QBPQ07021 282 aaKnown RBP8.29□□□□□ -1.08
PDE4D-205ENST00000360047 RTN4Q9NQC3 1192 aaKnown RBP8.29□□□□□ -1.08
PDE4D-205ENST00000360047 TOP2AP11388 1531 aaKnown RBP8.25□□□□□ -1.09
PDE4D-205ENST00000360047 CUX2O14529 1486 aa8.25□□□□□ -1.09
PDE4D-205ENST00000360047 CCDC88BA6NC98 1476 aa8.19□□□□□ -1.1
PDE4D-205ENST00000360047 CADPSQ9ULU8 1353 aa8.17□□□□□ -1.1
PDE4D-205ENST00000360047 NESP48681 1621 aa8.14□□□□□ -1.11
PDE4D-205ENST00000360047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.14□□□□□ -1.11
PDE4D-205ENST00000360047 NPM3O75607 178 aaKnown RBP8.13□□□□□ -1.11
PDE4D-205ENST00000360047 ERCC6Q03468 1493 aa8.13□□□□□ -1.11
PDE4D-205ENST00000360047 PDS5BQ9NTI5 1447 aa8.12□□□□□ -1.11
PDE4D-205ENST00000360047 LAMC3Q9Y6N6 1575 aa8.11□□□□□ -1.11
PDE4D-205ENST00000360047 CFTRP13569 1480 aa8.11□□□□□ -1.11
PDE4D-205ENST00000360047 FANCD2Q9BXW9 1451 aa8.07□□□□□ -1.12
PDE4D-205ENST00000360047 CEP164Q9UPV0 1460 aa8.04□□□□□ -1.12
PDE4D-205ENST00000360047 EIF5BO60841 1220 aaKnown RBP8.03□□□□□ -1.12
PDE4D-205ENST00000360047 TIMELESSQ9UNS1 1208 aa8.03□□□□□ -1.12
PDE4D-205ENST00000360047 PLEKHG5O94827 1062 aa8□□□□□ -1.13
PDE4D-205ENST00000360047 MRC2Q9UBG0 1479 aa8□□□□□ -1.13
PDE4D-205ENST00000360047 KIF21AQ7Z4S6 1674 aa7.99□□□□□ -1.13
PDE4D-205ENST00000360047 PRDM2Q13029 1718 aa7.97□□□□□ -1.13
PDE4D-205ENST00000360047 KLHL34Q8N239 644 aa7.96□□□□□ -1.13
PDE4D-205ENST00000360047 ABCC8Q09428 1581 aa7.96□□□□□ -1.14
PDE4D-205ENST00000360047 HRCP23327 699 aa7.95□□□□□ -1.14
PDE4D-205ENST00000360047 WRNQ14191 1432 aaPredicted RBP eCLIP7.95□□□□□ -1.14
PDE4D-205ENST00000360047 URB2Q14146 1524 aaKnown RBP7.94□□□□□ -1.14
PDE4D-205ENST00000360047 TRIM41Q8WV44 630 aa7.94□□□□□ -1.14
PDE4D-205ENST00000360047 TOPBP1Q92547 1522 aa7.93□□□□□ -1.14
PDE4D-205ENST00000360047 THOC2Q8NI27 1593 aaKnown RBP7.92□□□□□ -1.14
PDE4D-205ENST00000360047 WDR62O43379 1518 aa7.92□□□□□ -1.14
PDE4D-205ENST00000360047 DNMBPQ6XZF7 1577 aa7.91□□□□□ -1.14
PDE4D-205ENST00000360047 BCL11AQ9H165 835 aa7.91□□□□□ -1.14
PDE4D-205ENST00000360047 CUX1P39880 1505 aa7.9□□□□□ -1.15
PDE4D-205ENST00000360047 SOGA1O94964 1423 aa7.89□□□□□ -1.15
PDE4D-205ENST00000360047 U3KPZ7 1027 aaPredicted RBP7.89□□□□□ -1.15
PDE4D-205ENST00000360047 FGD5Q6ZNL6 1462 aa7.88□□□□□ -1.15
PDE4D-205ENST00000360047 KCNA4P22459 653 aa7.88□□□□□ -1.15
PDE4D-205ENST00000360047 ARXQ96QS3 562 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms