RNA–Protein interactions for RNA: ENST00000359062.3

PDE3A-201, Transcript of phosphodiesterase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE3A, Length 7,576 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-201ENST00000359062 NCLP19338 710 aaKnown RBP20.52■□□□□ 0.87
PDE3A-201ENST00000359062 BECN1Q14457 450 aa20.5■□□□□ 0.87
PDE3A-201ENST00000359062 DDRGK1Q96HY6 314 aa20.47■□□□□ 0.87
PDE3A-201ENST00000359062 TULP1O00294 542 aaPredicted RBP20.47■□□□□ 0.87
PDE3A-201ENST00000359062 MIER1Q8N108 512 aa20.45■□□□□ 0.86
PDE3A-201ENST00000359062 SENP3-EIF4A1A0A087X0R7 540 aa20.44■□□□□ 0.86
PDE3A-201ENST00000359062 TSPY4P0CV99 314 aa20.4■□□□□ 0.86
PDE3A-201ENST00000359062 TSPY10P0CW01 314 aa20.4■□□□□ 0.86
PDE3A-201ENST00000359062 GOLGA6L22H0YM25 854 aa20.4■□□□□ 0.86
PDE3A-201ENST00000359062 DCAF1Q9Y4B6 1507 aa20.39■□□□□ 0.85
PDE3A-201ENST00000359062 PTMAP06454 111 aaKnown RBP20.39■□□□□ 0.85
PDE3A-201ENST00000359062 DNTTIP2Q5QJE6 756 aaKnown RBP20.37■□□□□ 0.85
PDE3A-201ENST00000359062 ZRSR1Q15695 479 aaKnown RBP20.37■□□□□ 0.85
PDE3A-201ENST00000359062 MTUS2Q5JR59 1369 aa20.36■□□□□ 0.85
PDE3A-201ENST00000359062 EIF4G2P78344 907 aaKnown RBP eCLIP20.34■□□□□ 0.85
PDE3A-201ENST00000359062 TAOK2Q9UL54 1235 aa20.33■□□□□ 0.85
PDE3A-201ENST00000359062 CASC1Q6TDU7 716 aa20.33■□□□□ 0.85
PDE3A-201ENST00000359062 RRP7BPQ9NSQ0 103 aa20.33■□□□□ 0.84
PDE3A-201ENST00000359062 PPP1R15AO75807 674 aaPredicted RBP20.32■□□□□ 0.84
PDE3A-201ENST00000359062 PPM1GO15355 546 aaPredicted RBP20.31■□□□□ 0.84
PDE3A-201ENST00000359062 TNNT2P45379 298 aaPredicted RBP20.31■□□□□ 0.84
PDE3A-201ENST00000359062 FTSJ3Q8IY81 847 aaKnown RBP20.3■□□□□ 0.84
PDE3A-201ENST00000359062 ANP32EQ9BTT0 268 aa20.3■□□□□ 0.84
PDE3A-201ENST00000359062 LAS1LQ9Y4W2 734 aaKnown RBP20.29■□□□□ 0.84
PDE3A-201ENST00000359062 HAP1P54257 671 aaPredicted RBP20.27■□□□□ 0.83
PDE3A-201ENST00000359062 RGL3Q3MIN7 710 aa20.27■□□□□ 0.83
PDE3A-201ENST00000359062 SUPT16HQ9Y5B9 1047 aaKnown RBP20.22■□□□□ 0.83
PDE3A-201ENST00000359062 KCNH8Q96L42 1107 aa20.22■□□□□ 0.83
PDE3A-201ENST00000359062 RTN4Q9NQC3 1192 aaKnown RBP20.22■□□□□ 0.83
PDE3A-201ENST00000359062 PLCB2Q00722 1185 aa20.22■□□□□ 0.83
PDE3A-201ENST00000359062 NAP1L5Q96NT1 182 aaPredicted RBP20.22■□□□□ 0.83
PDE3A-201ENST00000359062 CHMP7Q8WUX9 453 aaPredicted RBP20.21■□□□□ 0.83
PDE3A-201ENST00000359062 CFAP53Q96M91 514 aa20.2■□□□□ 0.82
PDE3A-201ENST00000359062 NEUROD2Q15784 382 aa20.19■□□□□ 0.82
PDE3A-201ENST00000359062 KNSTRNQ9Y448 316 aa20.18■□□□□ 0.82
PDE3A-201ENST00000359062 HSP90AB1P08238 724 aaKnown RBP20.12■□□□□ 0.81
PDE3A-201ENST00000359062 NPHP1O15259 732 aa20.12■□□□□ 0.81
PDE3A-201ENST00000359062 ARID4BQ4LE39 1312 aaPredicted RBP20.12■□□□□ 0.81
PDE3A-201ENST00000359062 RGS3P49796 1198 aa20.12■□□□□ 0.81
PDE3A-201ENST00000359062 NAP1L2Q9ULW6 460 aaPredicted RBP20.12■□□□□ 0.81
PDE3A-201ENST00000359062 FRAT1Q92837 279 aaPredicted RBP20.1■□□□□ 0.81
PDE3A-201ENST00000359062 CLIP1P30622 1438 aa20.1■□□□□ 0.81
PDE3A-201ENST00000359062 MAPK8IP3Q9UPT6 1336 aa20.09■□□□□ 0.81
PDE3A-201ENST00000359062 OS9Q13438 667 aaPredicted RBP20.08■□□□□ 0.81
PDE3A-201ENST00000359062 ZCCHC6Q5VYS8 1495 aaKnown RBP20.08■□□□□ 0.8
PDE3A-201ENST00000359062 FGD1P98174 961 aa20.07■□□□□ 0.8
PDE3A-201ENST00000359062 LMOD2Q6P5Q4 547 aa20.07■□□□□ 0.8
PDE3A-201ENST00000359062 GOLGA6L6A8MZA4 724 aa20.06■□□□□ 0.8
PDE3A-201ENST00000359062 ERICH6BQ5W0A0 696 aa20.06■□□□□ 0.8
PDE3A-201ENST00000359062 CARD11Q9BXL7 1154 aa20.06■□□□□ 0.8
PDE3A-201ENST00000359062 CDCA8Q53HL2 280 aa20.05■□□□□ 0.8
PDE3A-201ENST00000359062 CC2D1BQ5T0F9 858 aaKnown RBP20.04■□□□□ 0.8
PDE3A-201ENST00000359062 KCNJ4P48050 445 aa20.03■□□□□ 0.8
PDE3A-201ENST00000359062 RSF1Q96T23 1441 aaPredicted RBP20.03■□□□□ 0.8
PDE3A-201ENST00000359062 NOP58Q9Y2X3 529 aaKnown RBP20.02■□□□□ 0.79
PDE3A-201ENST00000359062 NCBP3Q53F19 620 aaKnown RBP20.01■□□□□ 0.79
PDE3A-201ENST00000359062 GOLGA2Q08379 1002 aa19.99■□□□□ 0.79
PDE3A-201ENST00000359062 CCDC180Q9P1Z9 1646 aa19.99■□□□□ 0.79
PDE3A-201ENST00000359062 PLEKHD1A6NEE1 506 aa19.98■□□□□ 0.79
PDE3A-201ENST00000359062 SPRYD3Q8NCJ5 442 aa19.98■□□□□ 0.79
PDE3A-201ENST00000359062 POGKQ9P215 609 aa19.98■□□□□ 0.79
PDE3A-201ENST00000359062 U2SURPO15042 1029 aaKnown RBP19.97■□□□□ 0.79
PDE3A-201ENST00000359062 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
PDE3A-201ENST00000359062 PPP4R2Q9NY27 417 aa19.95■□□□□ 0.78
PDE3A-201ENST00000359062 CLSTN1O94985 981 aa19.95■□□□□ 0.78
PDE3A-201ENST00000359062 B4GALNT3Q6L9W6 998 aa19.94■□□□□ 0.78
PDE3A-201ENST00000359062 AMER1Q5JTC6 1135 aaPredicted RBP19.94■□□□□ 0.78
PDE3A-201ENST00000359062 DRC7Q8IY82 874 aa19.92■□□□□ 0.78
PDE3A-201ENST00000359062 GOLGA3Q08378 1498 aa19.92■□□□□ 0.78
PDE3A-201ENST00000359062 GOLGA6L4A6NEF3 574 aa19.92■□□□□ 0.78
PDE3A-201ENST00000359062 HSCBQ8IWL3 235 aa19.91■□□□□ 0.78
PDE3A-201ENST00000359062 CFDP1Q9UEE9 299 aaPredicted RBP19.91■□□□□ 0.78
PDE3A-201ENST00000359062 CHAF1AQ13111 956 aaPredicted RBP19.9■□□□□ 0.78
PDE3A-201ENST00000359062 CEP162Q5TB80 1403 aa19.9■□□□□ 0.78
PDE3A-201ENST00000359062 NRDCO43847 1150 aa19.9■□□□□ 0.78
PDE3A-201ENST00000359062 MSNP26038 577 aaKnown RBP19.89■□□□□ 0.77
PDE3A-201ENST00000359062 CHMP4BQ9H444 224 aaKnown RBP19.88■□□□□ 0.77
PDE3A-201ENST00000359062 SOX12O15370 315 aa19.87■□□□□ 0.77
PDE3A-201ENST00000359062 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
PDE3A-201ENST00000359062 PNNQ9H307 717 aaKnown RBP19.86■□□□□ 0.77
PDE3A-201ENST00000359062 SIN3AQ96ST3 1273 aa19.85■□□□□ 0.77
PDE3A-201ENST00000359062 MS4A1P11836 297 aa19.84■□□□□ 0.77
PDE3A-201ENST00000359062 ISY1Q9ULR0 285 aaKnown RBP19.83■□□□□ 0.76
PDE3A-201ENST00000359062 MCCP23508 829 aa19.82■□□□□ 0.76
PDE3A-201ENST00000359062 GNL2Q13823 731 aaKnown RBP19.79■□□□□ 0.76
PDE3A-201ENST00000359062 APBB1O00213 710 aa19.76■□□□□ 0.75
PDE3A-201ENST00000359062 L1TD1Q5T7N2 865 aaKnown RBP19.76■□□□□ 0.75
PDE3A-201ENST00000359062 TMF1P82094 1093 aa19.75■□□□□ 0.75
PDE3A-201ENST00000359062 DEKP35659 375 aaKnown RBP19.74■□□□□ 0.75
PDE3A-201ENST00000359062 SRPK2P78362 688 aaKnown RBP19.74■□□□□ 0.75
PDE3A-201ENST00000359062 DCAF11Q8TEB1 546 aa19.74■□□□□ 0.75
PDE3A-201ENST00000359062 ARID3AQ99856 593 aa19.74■□□□□ 0.75
PDE3A-201ENST00000359062 SAFB2Q14151 953 aaKnown RBP eCLIP19.73■□□□□ 0.75
PDE3A-201ENST00000359062 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
PDE3A-201ENST00000359062 RTF1Q92541 710 aaKnown RBP19.7■□□□□ 0.74
PDE3A-201ENST00000359062 GZF1Q9H116 711 aaPredicted RBP19.69■□□□□ 0.74
PDE3A-201ENST00000359062 KIAA2012Q0VF49 1180 aa19.69■□□□□ 0.74
PDE3A-201ENST00000359062 MORC1Q86VD1 984 aa19.69■□□□□ 0.74
PDE3A-201ENST00000359062 KIAA1211Q6ZU35 1233 aa19.67■□□□□ 0.74
PDE3A-201ENST00000359062 NOC3LQ8WTT2 800 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms