RNA–Protein interactions for RNA: ENST00000359013.4

TGFBR2-202, Transcript of transforming growth factor beta receptor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TGFBR2, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR2-202ENST00000359013 BECN1Q14457 450 aa20.71■□□□□ 0.91
TGFBR2-202ENST00000359013 EIF4G2P78344 907 aaKnown RBP eCLIP20.69■□□□□ 0.9
TGFBR2-202ENST00000359013 CEP162Q5TB80 1403 aa20.67■□□□□ 0.9
TGFBR2-202ENST00000359013 TNNT2P45379 298 aaPredicted RBP20.64■□□□□ 0.9
TGFBR2-202ENST00000359013 CLIP1P30622 1438 aa20.62■□□□□ 0.89
TGFBR2-202ENST00000359013 CHIC2Q9UKJ5 165 aa20.6■□□□□ 0.89
TGFBR2-202ENST00000359013 SIN3AQ96ST3 1273 aa20.58■□□□□ 0.88
TGFBR2-202ENST00000359013 SCRIBQ14160 1630 aa20.55■□□□□ 0.88
TGFBR2-202ENST00000359013 ARID4BQ4LE39 1312 aaPredicted RBP20.55■□□□□ 0.88
TGFBR2-202ENST00000359013 WDR43Q15061 677 aaKnown RBP eCLIP20.54■□□□□ 0.88
TGFBR2-202ENST00000359013 CCER2I3L3R5 266 aa20.53■□□□□ 0.88
TGFBR2-202ENST00000359013 RGS3P49796 1198 aa20.52■□□□□ 0.88
TGFBR2-202ENST00000359013 ZNF777Q9ULD5 760 aaPredicted RBP20.5■□□□□ 0.87
TGFBR2-202ENST00000359013 IPO9Q96P70 1041 aaKnown RBP20.48■□□□□ 0.87
TGFBR2-202ENST00000359013 GOLGA6L22H0YM25 854 aa20.47■□□□□ 0.87
TGFBR2-202ENST00000359013 NCLP19338 710 aaKnown RBP20.47■□□□□ 0.87
TGFBR2-202ENST00000359013 DNTTIP2Q5QJE6 756 aaKnown RBP20.46■□□□□ 0.87
TGFBR2-202ENST00000359013 FBLN2P98095 1184 aa20.44■□□□□ 0.86
TGFBR2-202ENST00000359013 KDM2AQ9Y2K7 1162 aa20.44■□□□□ 0.86
TGFBR2-202ENST00000359013 SLC24A1O60721 1099 aa20.43■□□□□ 0.86
TGFBR2-202ENST00000359013 PTMAP06454 111 aaKnown RBP20.42■□□□□ 0.86
TGFBR2-202ENST00000359013 KCNH8Q96L42 1107 aa20.42■□□□□ 0.86
TGFBR2-202ENST00000359013 PNNQ9H307 717 aaKnown RBP20.42■□□□□ 0.86
TGFBR2-202ENST00000359013 L1TD1Q5T7N2 865 aaKnown RBP20.42■□□□□ 0.86
TGFBR2-202ENST00000359013 TNIKQ9UKE5 1360 aa20.4■□□□□ 0.86
TGFBR2-202ENST00000359013 PRKCSHP14314 528 aaPredicted RBP20.39■□□□□ 0.86
TGFBR2-202ENST00000359013 FANCIQ9NVI1 1328 aa20.36■□□□□ 0.85
TGFBR2-202ENST00000359013 RRP7BPQ9NSQ0 103 aa20.35■□□□□ 0.85
TGFBR2-202ENST00000359013 VSIG10Q8N0Z9 540 aa20.35■□□□□ 0.85
TGFBR2-202ENST00000359013 ANO8Q9HCE9 1232 aaPredicted RBP20.35■□□□□ 0.85
TGFBR2-202ENST00000359013 GOLGA3Q08378 1498 aa20.34■□□□□ 0.85
TGFBR2-202ENST00000359013 CDK11BP21127 795 aaKnown RBP20.33■□□□□ 0.85
TGFBR2-202ENST00000359013 AMER1Q5JTC6 1135 aaPredicted RBP20.28■□□□□ 0.84
TGFBR2-202ENST00000359013 RSPH6AQ9H0K4 717 aa20.28■□□□□ 0.84
TGFBR2-202ENST00000359013 TCERG1O14776 1098 aaKnown RBP20.27■□□□□ 0.84
TGFBR2-202ENST00000359013 ARID3AQ99856 593 aa20.27■□□□□ 0.84
TGFBR2-202ENST00000359013 GZF1Q9H116 711 aaPredicted RBP20.27■□□□□ 0.84
TGFBR2-202ENST00000359013 SPRYD3Q8NCJ5 442 aa20.26■□□□□ 0.83
TGFBR2-202ENST00000359013 HSP90AA2PQ14568 343 aaPredicted RBP20.26■□□□□ 0.83
TGFBR2-202ENST00000359013 MSNP26038 577 aaKnown RBP20.25■□□□□ 0.83
TGFBR2-202ENST00000359013 USP35Q9P2H5 1018 aa20.25■□□□□ 0.83
TGFBR2-202ENST00000359013 MTUS2Q5JR59 1369 aa20.25■□□□□ 0.83
TGFBR2-202ENST00000359013 EEA1Q15075 1411 aa20.25■□□□□ 0.83
TGFBR2-202ENST00000359013 RSF1Q96T23 1441 aaPredicted RBP20.25■□□□□ 0.83
TGFBR2-202ENST00000359013 SLKQ9H2G2 1235 aaPredicted RBP20.24■□□□□ 0.83
TGFBR2-202ENST00000359013 TIMELESSQ9UNS1 1208 aa20.24■□□□□ 0.83
TGFBR2-202ENST00000359013 TPRNQ4KMQ1 711 aa20.21■□□□□ 0.83
TGFBR2-202ENST00000359013 GSE1Q14687 1217 aa20.2■□□□□ 0.82
TGFBR2-202ENST00000359013 PLCB2Q00722 1185 aa20.18■□□□□ 0.82
TGFBR2-202ENST00000359013 MYH16Q9H6N6 1097 aa20.18■□□□□ 0.82
TGFBR2-202ENST00000359013 HSP90AB1P08238 724 aaKnown RBP20.16■□□□□ 0.82
TGFBR2-202ENST00000359013 FRAT1Q92837 279 aaPredicted RBP20.15■□□□□ 0.82
TGFBR2-202ENST00000359013 CCNB3Q8WWL7 1395 aa20.15■□□□□ 0.82
TGFBR2-202ENST00000359013 GOLGA6L3A6NEY3 463 aa20.13■□□□□ 0.81
TGFBR2-202ENST00000359013 HSPA5P11021 654 aaKnown RBP20.12■□□□□ 0.81
TGFBR2-202ENST00000359013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.12■□□□□ 0.813e-7■□□□□ 10.2
TGFBR2-202ENST00000359013 CARD11Q9BXL7 1154 aa20.11■□□□□ 0.81
TGFBR2-202ENST00000359013 NEUROD2Q15784 382 aa20.11■□□□□ 0.81
TGFBR2-202ENST00000359013 HSCBQ8IWL3 235 aa20.11■□□□□ 0.81
TGFBR2-202ENST00000359013 RCAN3Q9UKA8 241 aa20.11■□□□□ 0.81
TGFBR2-202ENST00000359013 SLC4A3P48751 1232 aa20.1■□□□□ 0.81
TGFBR2-202ENST00000359013 FTSJ3Q8IY81 847 aaKnown RBP20.09■□□□□ 0.81
TGFBR2-202ENST00000359013 ZBTB7CA1YPR0 619 aa20.09■□□□□ 0.81
TGFBR2-202ENST00000359013 IL27Q8NEV9 243 aa20.09■□□□□ 0.81
TGFBR2-202ENST00000359013 CHGAP10645 457 aaKnown RBP20.08■□□□□ 0.8
TGFBR2-202ENST00000359013 NUDCQ9Y266 331 aa20.07■□□□□ 0.8
TGFBR2-202ENST00000359013 CECR2Q9BXF3 1484 aa20.06■□□□□ 0.8
TGFBR2-202ENST00000359013 PDE4AP27815 886 aa20.05■□□□□ 0.8
TGFBR2-202ENST00000359013 KNSTRNQ9Y448 316 aa20.05■□□□□ 0.8
TGFBR2-202ENST00000359013 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
TGFBR2-202ENST00000359013 RGL3Q3MIN7 710 aa20.04■□□□□ 0.8
TGFBR2-202ENST00000359013 CC2D1BQ5T0F9 858 aaKnown RBP20.04■□□□□ 0.8
TGFBR2-202ENST00000359013 PPP1R15AO75807 674 aaPredicted RBP20.03■□□□□ 0.8
TGFBR2-202ENST00000359013 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.8
TGFBR2-202ENST00000359013 CHAF1AQ13111 956 aaPredicted RBP20.02■□□□□ 0.79
TGFBR2-202ENST00000359013 TSPY4P0CV99 314 aa19.99■□□□□ 0.79
TGFBR2-202ENST00000359013 TSPY10P0CW01 314 aa19.99■□□□□ 0.79
TGFBR2-202ENST00000359013 KANK4Q5T7N3 995 aaPredicted RBP19.99■□□□□ 0.79
TGFBR2-202ENST00000359013 PKNOX2Q96KN3 472 aa19.99■□□□□ 0.79
TGFBR2-202ENST00000359013 SOGA1O94964 1423 aa19.98■□□□□ 0.79
TGFBR2-202ENST00000359013 SETD5Q9C0A6 1442 aa19.97■□□□□ 0.79
TGFBR2-202ENST00000359013 GBP4Q96PP9 640 aa19.96■□□□□ 0.79
TGFBR2-202ENST00000359013 RAB3GAP2Q9H2M9 1393 aa19.96■□□□□ 0.79
TGFBR2-202ENST00000359013 WRNQ14191 1432 aaPredicted RBP eCLIP19.94■□□□□ 0.78
TGFBR2-202ENST00000359013 BRPF3Q9ULD4 1205 aa19.94■□□□□ 0.78
TGFBR2-202ENST00000359013 VPS8Q8N3P4 1428 aa19.93■□□□□ 0.78
TGFBR2-202ENST00000359013 CASC1Q6TDU7 716 aa19.93■□□□□ 0.78
TGFBR2-202ENST00000359013 PAK3O75914 559 aaPredicted RBP19.91■□□□□ 0.78
TGFBR2-202ENST00000359013 DHX57Q6P158 1386 aaKnown RBP19.9■□□□□ 0.78
TGFBR2-202ENST00000359013 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.78
TGFBR2-202ENST00000359013 KIAA2012Q0VF49 1180 aa19.88■□□□□ 0.77
TGFBR2-202ENST00000359013 ZRSR1Q15695 479 aaKnown RBP19.87■□□□□ 0.77
TGFBR2-202ENST00000359013 EXOC6Q8TAG9 804 aa19.87■□□□□ 0.77
TGFBR2-202ENST00000359013 CFAP53Q96M91 514 aa19.86■□□□□ 0.77
TGFBR2-202ENST00000359013 NFKBIBQ15653 356 aa19.85■□□□□ 0.77
TGFBR2-202ENST00000359013 CDCA8Q53HL2 280 aa19.83■□□□□ 0.77
TGFBR2-202ENST00000359013 MSH5O43196 834 aa19.83■□□□□ 0.76
TGFBR2-202ENST00000359013 MFAP1P55081 439 aaKnown RBP19.82■□□□□ 0.76
TGFBR2-202ENST00000359013 ZBED9Q6R2W3 1325 aa19.82■□□□□ 0.76
TGFBR2-202ENST00000359013 PTMSP20962 102 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms