RNA–Protein interactions for RNA: ENST00000358536.8

PLXNB1-202, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,308 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-202ENST00000358536 SCRIBQ14160 1630 aa20.26■□□□□ 0.83
PLXNB1-202ENST00000358536 PPP1R15AO75807 674 aaPredicted RBP20.26■□□□□ 0.83
PLXNB1-202ENST00000358536 TULP1O00294 542 aaPredicted RBP20.25■□□□□ 0.83
PLXNB1-202ENST00000358536 TPRNQ4KMQ1 711 aa20.24■□□□□ 0.83
PLXNB1-202ENST00000358536 MTUS2Q5JR59 1369 aa20.22■□□□□ 0.83
PLXNB1-202ENST00000358536 SENP3-EIF4A1A0A087X0R7 540 aa20.21■□□□□ 0.83
PLXNB1-202ENST00000358536 HAP1P54257 671 aaPredicted RBP20.21■□□□□ 0.83
PLXNB1-202ENST00000358536 BECN1Q14457 450 aa20.2■□□□□ 0.82
PLXNB1-202ENST00000358536 TRIM44Q96DX7 344 aaPredicted RBP20.2■□□□□ 0.82
PLXNB1-202ENST00000358536 RRP7BPQ9NSQ0 103 aa20.18■□□□□ 0.82
PLXNB1-202ENST00000358536 CHMP7Q8WUX9 453 aaPredicted RBP20.18■□□□□ 0.82
PLXNB1-202ENST00000358536 KCNH8Q96L42 1107 aa20.17■□□□□ 0.82
PLXNB1-202ENST00000358536 PPM1GO15355 546 aaPredicted RBP20.16■□□□□ 0.82
PLXNB1-202ENST00000358536 EIF4G2P78344 907 aaKnown RBP eCLIP20.16■□□□□ 0.821e-6■■■■■ 28.1
PLXNB1-202ENST00000358536 RGL3Q3MIN7 710 aa20.15■□□□□ 0.82
PLXNB1-202ENST00000358536 DDRGK1Q96HY6 314 aa20.15■□□□□ 0.82
PLXNB1-202ENST00000358536 MIER1Q8N108 512 aa20.14■□□□□ 0.82
PLXNB1-202ENST00000358536 GOLGA6L22H0YM25 854 aa20.13■□□□□ 0.81
PLXNB1-202ENST00000358536 ZRSR1Q15695 479 aaKnown RBP20.13■□□□□ 0.81
PLXNB1-202ENST00000358536 TAOK2Q9UL54 1235 aa20.11■□□□□ 0.81
PLXNB1-202ENST00000358536 PTMAP06454 111 aaKnown RBP20.1■□□□□ 0.81
PLXNB1-202ENST00000358536 LAS1LQ9Y4W2 734 aaKnown RBP20.09■□□□□ 0.81
PLXNB1-202ENST00000358536 ARID4BQ4LE39 1312 aaPredicted RBP20.09■□□□□ 0.81
PLXNB1-202ENST00000358536 CASC1Q6TDU7 716 aa20.07■□□□□ 0.8
PLXNB1-202ENST00000358536 FTSJ3Q8IY81 847 aaKnown RBP20.06■□□□□ 0.8
PLXNB1-202ENST00000358536 CFAP53Q96M91 514 aa20.06■□□□□ 0.8
PLXNB1-202ENST00000358536 DNTTIP2Q5QJE6 756 aaKnown RBP20.05■□□□□ 0.8
PLXNB1-202ENST00000358536 NEUROD2Q15784 382 aa20.03■□□□□ 0.8
PLXNB1-202ENST00000358536 LMOD2Q6P5Q4 547 aa20.01■□□□□ 0.79
PLXNB1-202ENST00000358536 ANP32EQ9BTT0 268 aa20.01■□□□□ 0.79
PLXNB1-202ENST00000358536 NPHP1O15259 732 aa20.01■□□□□ 0.79
PLXNB1-202ENST00000358536 KNSTRNQ9Y448 316 aa20■□□□□ 0.79
PLXNB1-202ENST00000358536 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
PLXNB1-202ENST00000358536 PLCB2Q00722 1185 aa19.95■□□□□ 0.78
PLXNB1-202ENST00000358536 PLEKHD1A6NEE1 506 aa19.95■□□□□ 0.78
PLXNB1-202ENST00000358536 MAPK8IP3Q9UPT6 1336 aa19.93■□□□□ 0.78
PLXNB1-202ENST00000358536 SUPT16HQ9Y5B9 1047 aaKnown RBP19.93■□□□□ 0.78
PLXNB1-202ENST00000358536 TNNT2P45379 298 aaPredicted RBP19.93■□□□□ 0.78
PLXNB1-202ENST00000358536 CDCA8Q53HL2 280 aa19.92■□□□□ 0.78
PLXNB1-202ENST00000358536 CLIP1P30622 1438 aa19.91■□□□□ 0.78
PLXNB1-202ENST00000358536 NAP1L2Q9ULW6 460 aaPredicted RBP19.9■□□□□ 0.78
PLXNB1-202ENST00000358536 OS9Q13438 667 aaPredicted RBP19.9■□□□□ 0.78
PLXNB1-202ENST00000358536 FRAT1Q92837 279 aaPredicted RBP19.9■□□□□ 0.78
PLXNB1-202ENST00000358536 CARD11Q9BXL7 1154 aa19.9■□□□□ 0.78
PLXNB1-202ENST00000358536 RGS3P49796 1198 aa19.88■□□□□ 0.77
PLXNB1-202ENST00000358536 POGKQ9P215 609 aa19.88■□□□□ 0.77
PLXNB1-202ENST00000358536 FGD1P98174 961 aa19.88■□□□□ 0.77
PLXNB1-202ENST00000358536 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
PLXNB1-202ENST00000358536 ZCCHC6Q5VYS8 1495 aaKnown RBP19.85■□□□□ 0.77
PLXNB1-202ENST00000358536 NUDCQ9Y266 331 aa19.85■□□□□ 0.77
PLXNB1-202ENST00000358536 HSP90AB1P08238 724 aaKnown RBP19.84■□□□□ 0.77
PLXNB1-202ENST00000358536 KCNJ4P48050 445 aa19.84■□□□□ 0.77
PLXNB1-202ENST00000358536 NAP1L5Q96NT1 182 aaPredicted RBP19.83■□□□□ 0.77
PLXNB1-202ENST00000358536 CC2D1BQ5T0F9 858 aaKnown RBP19.83■□□□□ 0.77
PLXNB1-202ENST00000358536 GOLGA2Q08379 1002 aa19.83■□□□□ 0.76
PLXNB1-202ENST00000358536 U2SURPO15042 1029 aaKnown RBP19.82■□□□□ 0.76
PLXNB1-202ENST00000358536 CFDP1Q9UEE9 299 aaPredicted RBP19.82■□□□□ 0.76
PLXNB1-202ENST00000358536 NCBP3Q53F19 620 aaKnown RBP19.81■□□□□ 0.76
PLXNB1-202ENST00000358536 RTN4Q9NQC3 1192 aaKnown RBP19.8■□□□□ 0.76
PLXNB1-202ENST00000358536 GOLGA6L6A8MZA4 724 aa19.78■□□□□ 0.76
PLXNB1-202ENST00000358536 SOX12O15370 315 aa19.76■□□□□ 0.75
PLXNB1-202ENST00000358536 CLSTN1O94985 981 aa19.75■□□□□ 0.75
PLXNB1-202ENST00000358536 ERICH6BQ5W0A0 696 aa19.74■□□□□ 0.75
PLXNB1-202ENST00000358536 CHMP4BQ9H444 224 aaKnown RBP19.7■□□□□ 0.74
PLXNB1-202ENST00000358536 GOLGA6L4A6NEF3 574 aa19.7■□□□□ 0.74
PLXNB1-202ENST00000358536 ISY1Q9ULR0 285 aaKnown RBP19.69■□□□□ 0.74
PLXNB1-202ENST00000358536 PNNQ9H307 717 aaKnown RBP19.68■□□□□ 0.74
PLXNB1-202ENST00000358536 PPP4R2Q9NY27 417 aa19.68■□□□□ 0.74
PLXNB1-202ENST00000358536 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
PLXNB1-202ENST00000358536 SPRYD3Q8NCJ5 442 aa19.67■□□□□ 0.74
PLXNB1-202ENST00000358536 NRDCO43847 1150 aa19.67■□□□□ 0.74
PLXNB1-202ENST00000358536 MS4A1P11836 297 aa19.67■□□□□ 0.74
PLXNB1-202ENST00000358536 SIN3AQ96ST3 1273 aa19.67■□□□□ 0.74
PLXNB1-202ENST00000358536 NOP58Q9Y2X3 529 aaKnown RBP19.66■□□□□ 0.74
PLXNB1-202ENST00000358536 B4GALNT3Q6L9W6 998 aa19.65■□□□□ 0.74
PLXNB1-202ENST00000358536 CEP162Q5TB80 1403 aa19.65■□□□□ 0.74
PLXNB1-202ENST00000358536 HSCBQ8IWL3 235 aa19.64■□□□□ 0.73
PLXNB1-202ENST00000358536 MLECQ14165 292 aa19.64■□□□□ 0.73
PLXNB1-202ENST00000358536 SRPK2P78362 688 aaKnown RBP19.62■□□□□ 0.73
PLXNB1-202ENST00000358536 SAFB2Q14151 953 aaKnown RBP eCLIP19.62■□□□□ 0.73
PLXNB1-202ENST00000358536 DRC7Q8IY82 874 aa19.62■□□□□ 0.73
PLXNB1-202ENST00000358536 MCCP23508 829 aa19.59■□□□□ 0.73
PLXNB1-202ENST00000358536 TMF1P82094 1093 aa19.59■□□□□ 0.73
PLXNB1-202ENST00000358536 DCAF11Q8TEB1 546 aa19.59■□□□□ 0.73
PLXNB1-202ENST00000358536 CHAF1AQ13111 956 aaPredicted RBP19.58■□□□□ 0.73
PLXNB1-202ENST00000358536 TRHP20396 242 aaPredicted RBP19.57■□□□□ 0.72
PLXNB1-202ENST00000358536 APBB1O00213 710 aa19.57■□□□□ 0.72
PLXNB1-202ENST00000358536 GNL2Q13823 731 aaKnown RBP19.57■□□□□ 0.72
PLXNB1-202ENST00000358536 RTF1Q92541 710 aaKnown RBP19.56■□□□□ 0.72
PLXNB1-202ENST00000358536 MSNP26038 577 aaKnown RBP19.55■□□□□ 0.72
PLXNB1-202ENST00000358536 MORC1Q86VD1 984 aa19.54■□□□□ 0.72
PLXNB1-202ENST00000358536 STK26Q9P289 416 aa19.52■□□□□ 0.71
PLXNB1-202ENST00000358536 KANK1Q14678 1352 aa19.52■□□□□ 0.71
PLXNB1-202ENST00000358536 ERCC6Q03468 1493 aa19.5■□□□□ 0.71
PLXNB1-202ENST00000358536 AMER1Q5JTC6 1135 aaPredicted RBP19.5■□□□□ 0.71
PLXNB1-202ENST00000358536 ZNF330Q9Y3S2 320 aaPredicted RBP19.5■□□□□ 0.71
PLXNB1-202ENST00000358536 HDGFP51858 240 aaKnown RBP19.49■□□□□ 0.71
PLXNB1-202ENST00000358536 PAK3O75914 559 aaPredicted RBP19.49■□□□□ 0.71
PLXNB1-202ENST00000358536 KIF27Q86VH2 1401 aa19.48■□□□□ 0.71
PLXNB1-202ENST00000358536 CCNB3Q8WWL7 1395 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms