RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 PPP4R2Q9NY27 417 aa15.76■□□□□ 0.11
CNOT3-202ENST00000358389 CEP164Q9UPV0 1460 aa15.74■□□□□ 0.11
CNOT3-202ENST00000358389 PAK3O75914 559 aaPredicted RBP15.74■□□□□ 0.11
CNOT3-202ENST00000358389 ZBTB47Q9UFB7 747 aaPredicted RBP15.73■□□□□ 0.11
CNOT3-202ENST00000358389 NPM2Q86SE8 214 aaKnown RBP15.72■□□□□ 0.11
CNOT3-202ENST00000358389 IL27Q8NEV9 243 aa15.72■□□□□ 0.11
CNOT3-202ENST00000358389 PPP1R15AO75807 674 aaPredicted RBP15.7■□□□□ 0.1
CNOT3-202ENST00000358389 FAM9BQ8IZU0 186 aa15.7■□□□□ 0.1
CNOT3-202ENST00000358389 UNC13AQ9UPW8 1703 aa15.7■□□□□ 0.1
CNOT3-202ENST00000358389 ERICH6BQ5W0A0 696 aa15.66■□□□□ 0.1
CNOT3-202ENST00000358389 RAB3GAP2Q9H2M9 1393 aa15.65■□□□□ 0.1
CNOT3-202ENST00000358389 CCNB3Q8WWL7 1395 aa15.64■□□□□ 0.09
CNOT3-202ENST00000358389 LAS1LQ9Y4W2 734 aaKnown RBP15.62■□□□□ 0.09
CNOT3-202ENST00000358389 SENP3-EIF4A1A0A087X0R7 540 aa15.6■□□□□ 0.09
CNOT3-202ENST00000358389 RAPGEF2Q9Y4G8 1499 aa15.6■□□□□ 0.09
CNOT3-202ENST00000358389 BAZ1AQ9NRL2 1556 aaPredicted RBP15.59■□□□□ 0.09
CNOT3-202ENST00000358389 P3H3Q8IVL6 736 aa15.58■□□□□ 0.09
CNOT3-202ENST00000358389 TONSLQ96HA7 1378 aa15.58■□□□□ 0.08
CNOT3-202ENST00000358389 NEFMP07197 916 aa15.57■□□□□ 0.08
CNOT3-202ENST00000358389 IPO9Q96P70 1041 aaKnown RBP15.57■□□□□ 0.08
CNOT3-202ENST00000358389 MRS2Q9HD23 443 aa15.55■□□□□ 0.08
CNOT3-202ENST00000358389 BAZ1BQ9UIG0 1483 aaKnown RBP15.54■□□□□ 0.08
CNOT3-202ENST00000358389 KIF21BO75037 1637 aa15.53■□□□□ 0.08
CNOT3-202ENST00000358389 WDR97A6NE52 1622 aa15.53■□□□□ 0.08
CNOT3-202ENST00000358389 SETD5Q9C0A6 1442 aa15.49■□□□□ 0.07
CNOT3-202ENST00000358389 ARID3CA6NKF2 412 aa15.49■□□□□ 0.07
CNOT3-202ENST00000358389 ZNF326Q5BKZ1 582 aaKnown RBP15.47■□□□□ 0.07
CNOT3-202ENST00000358389 TOP2AP11388 1531 aaKnown RBP15.46■□□□□ 0.07
CNOT3-202ENST00000358389 FBLN2P98095 1184 aa15.46■□□□□ 0.07
CNOT3-202ENST00000358389 NACADO15069 1562 aa15.46■□□□□ 0.06
CNOT3-202ENST00000358389 DAXXQ9UER7 740 aaPredicted RBP15.45■□□□□ 0.06
CNOT3-202ENST00000358389 CCDC184Q52MB2 194 aa15.44■□□□□ 0.06
CNOT3-202ENST00000358389 RRBP1Q9P2E9 1410 aaKnown RBP15.43■□□□□ 0.06
CNOT3-202ENST00000358389 TIMELESSQ9UNS1 1208 aa15.43■□□□□ 0.06
CNOT3-202ENST00000358389 SMARCA2P51531 1590 aa15.43■□□□□ 0.06
CNOT3-202ENST00000358389 BRPF3Q9ULD4 1205 aa15.41■□□□□ 0.06
CNOT3-202ENST00000358389 UBE2Q2Q8WVN8 375 aa15.4■□□□□ 0.06
CNOT3-202ENST00000358389 MAPKBP1O60336 1514 aa15.38■□□□□ 0.05
CNOT3-202ENST00000358389 HSPA5P11021 654 aaKnown RBP15.37■□□□□ 0.05
CNOT3-202ENST00000358389 PPM1GO15355 546 aaPredicted RBP15.35■□□□□ 0.05
CNOT3-202ENST00000358389 EIF4G2P78344 907 aaKnown RBP eCLIP15.34■□□□□ 0.05
CNOT3-202ENST00000358389 SLC4A1APQ9BWU0 796 aaKnown RBP15.34■□□□□ 0.05
CNOT3-202ENST00000358389 ARAP1Q96P48 1450 aa15.33■□□□□ 0.05
CNOT3-202ENST00000358389 ZBED9Q6R2W3 1325 aa15.31■□□□□ 0.04
CNOT3-202ENST00000358389 WASHC2AQ641Q2 1341 aa15.3■□□□□ 0.04
CNOT3-202ENST00000358389 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
CNOT3-202ENST00000358389 PRKRIP1Q9H875 184 aaPredicted RBP15.29■□□□□ 0.04
CNOT3-202ENST00000358389 USP35Q9P2H5 1018 aa15.28■□□□□ 0.04
CNOT3-202ENST00000358389 AKNAQ7Z591 1439 aa15.28■□□□□ 0.04
CNOT3-202ENST00000358389 CUX2O14529 1486 aa15.27■□□□□ 0.04
CNOT3-202ENST00000358389 SLC4A3P48751 1232 aa15.26■□□□□ 0.03
CNOT3-202ENST00000358389 GSE1Q14687 1217 aa15.26■□□□□ 0.03
CNOT3-202ENST00000358389 PDE4AP27815 886 aa15.25■□□□□ 0.03
CNOT3-202ENST00000358389 NUDCQ9Y266 331 aa15.25■□□□□ 0.03
CNOT3-202ENST00000358389 PHLDB1Q86UU1 1377 aa15.23■□□□□ 0.03
CNOT3-202ENST00000358389 ARXQ96QS3 562 aa15.23■□□□□ 0.03
CNOT3-202ENST00000358389 CHIC2Q9UKJ5 165 aa15.22■□□□□ 0.03
CNOT3-202ENST00000358389 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
CNOT3-202ENST00000358389 TMC1Q8TDI8 760 aa15.2■□□□□ 0.02
CNOT3-202ENST00000358389 FRAT1Q92837 279 aaPredicted RBP15.2■□□□□ 0.02
CNOT3-202ENST00000358389 TCERG1O14776 1098 aaKnown RBP15.19■□□□□ 0.02
CNOT3-202ENST00000358389 GLIPR1L2Q4G1C9 344 aa15.19■□□□□ 0.02
CNOT3-202ENST00000358389 PKNOX2Q96KN3 472 aa15.19■□□□□ 0.02
CNOT3-202ENST00000358389 RRP7BPQ9NSQ0 103 aa15.19■□□□□ 0.02
CNOT3-202ENST00000358389 EXOC6Q8TAG9 804 aa15.19■□□□□ 0.02
CNOT3-202ENST00000358389 DDRGK1Q96HY6 314 aa15.19■□□□□ 0.02
CNOT3-202ENST00000358389 NFKBIBQ15653 356 aa15.17■□□□□ 0.02
CNOT3-202ENST00000358389 ZNF777Q9ULD5 760 aaPredicted RBP15.17■□□□□ 0.02
CNOT3-202ENST00000358389 PEG3Q9GZU2 1588 aa15.16■□□□□ 0.02
CNOT3-202ENST00000358389 RSPH6AQ9H0K4 717 aa15.15■□□□□ 0.02
CNOT3-202ENST00000358389 C11orf95C9JLR9 678 aaPredicted RBP15.14■□□□□ 0.01
CNOT3-202ENST00000358389 FOXD1Q16676 465 aa15.13■□□□□ 0.01
CNOT3-202ENST00000358389 CNTLNQ9NXG0 1405 aa15.13■□□□□ 0.01
CNOT3-202ENST00000358389 SKAP1Q86WV1 359 aa15.13■□□□□ 0.01
CNOT3-202ENST00000358389 ARHGAP35Q9NRY4 1499 aa15.13■□□□□ 0.01
CNOT3-202ENST00000358389 WASHC2CQ9Y4E1 1318 aa15.12■□□□□ 0.01
CNOT3-202ENST00000358389 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
CNOT3-202ENST00000358389 KIF27Q86VH2 1401 aa15.12■□□□□ 0.01
CNOT3-202ENST00000358389 BACH2Q9BYV9 841 aa15.11■□□□□ 0.01
CNOT3-202ENST00000358389 FHAD1B1AJZ9 1412 aa15.1■□□□□ 0.01
CNOT3-202ENST00000358389 L3MBTL2Q969R5 705 aa15.1■□□□□ 0.01
CNOT3-202ENST00000358389 PRXQ9BXM0 1461 aa15.1■□□□□ 0.01
CNOT3-202ENST00000358389 NAP1L5Q96NT1 182 aaPredicted RBP15.09■□□□□ 0.01
CNOT3-202ENST00000358389 CCDC7Q96M83 1385 aa15.08■□□□□ 0
CNOT3-202ENST00000358389 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
CNOT3-202ENST00000358389 SMG6Q86US8 1419 aaKnown RBP15.07■□□□□ 0
CNOT3-202ENST00000358389 RCAN3Q9UKA8 241 aa15.07■□□□□ 0
CNOT3-202ENST00000358389 LRRC9Q6ZRR7 1453 aa15.07■□□□□ 0
CNOT3-202ENST00000358389 RRP1P56182 461 aaKnown RBP15.07■□□□□ 0
CNOT3-202ENST00000358389 CCDC18Q5T9S5 1454 aa15.06■□□□□ 0
CNOT3-202ENST00000358389 FRAT2O75474 233 aaPredicted RBP15.05■□□□□ 0
CNOT3-202ENST00000358389 PLIN1O60240 522 aa15.05■□□□□ -0
CNOT3-202ENST00000358389 MTUS2Q5JR59 1369 aa15.04■□□□□ -0
CNOT3-202ENST00000358389 KIF7Q2M1P5 1343 aa15.03■□□□□ -0
CNOT3-202ENST00000358389 ERICH3Q5RHP9 1530 aa15.03■□□□□ -0
CNOT3-202ENST00000358389 MS4A1P11836 297 aa15.02□□□□□ -0.01
CNOT3-202ENST00000358389 RGS3P49796 1198 aa15.02□□□□□ -0.01
CNOT3-202ENST00000358389 FAM43AQ8N2R8 423 aa15.01□□□□□ -0.01
CNOT3-202ENST00000358389 UACAQ9BZF9 1416 aa15□□□□□ -0.01
CNOT3-202ENST00000358389 ARID4BQ4LE39 1312 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms