RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 FAM9BQ8IZU0 186 aa13.89□□□□□ -0.19
SPTAN1-201ENST00000358161 HNRNPUQ00839 825 aaKnown RBP eCLIP13.89□□□□□ -0.19
SPTAN1-201ENST00000358161 SCAF1Q9H7N4 1312 aaKnown RBP13.89□□□□□ -0.19
SPTAN1-201ENST00000358161 ANP32AP39687 249 aaKnown RBP13.88□□□□□ -0.19
SPTAN1-201ENST00000358161 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.88□□□□□ -0.19
SPTAN1-201ENST00000358161 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
SPTAN1-201ENST00000358161 FHAD1B1AJZ9 1412 aa13.87□□□□□ -0.19
SPTAN1-201ENST00000358161 EIF4G2P78344 907 aaKnown RBP eCLIP13.87□□□□□ -0.19
SPTAN1-201ENST00000358161 EIF4G1Q04637 1599 aaKnown RBP13.86□□□□□ -0.19
SPTAN1-201ENST00000358161 C14orf37Q86TY3 774 aa13.85□□□□□ -0.19
SPTAN1-201ENST00000358161 PDS5BQ9NTI5 1447 aa13.84□□□□□ -0.19
SPTAN1-201ENST00000358161 CUX2O14529 1486 aa13.84□□□□□ -0.19
SPTAN1-201ENST00000358161 UPF2Q9HAU5 1272 aaKnown RBP13.83□□□□□ -0.2
SPTAN1-201ENST00000358161 CDCA8Q53HL2 280 aa13.82□□□□□ -0.2
SPTAN1-201ENST00000358161 CARMIL1Q5VZK9 1371 aa13.81□□□□□ -0.2
SPTAN1-201ENST00000358161 MRS2Q9HD23 443 aa13.8□□□□□ -0.2
SPTAN1-201ENST00000358161 SALL2Q9Y467 1007 aaPredicted RBP13.8□□□□□ -0.2
SPTAN1-201ENST00000358161 CCNB3Q8WWL7 1395 aa13.79□□□□□ -0.2
SPTAN1-201ENST00000358161 NPM2Q86SE8 214 aaKnown RBP13.78□□□□□ -0.2
SPTAN1-201ENST00000358161 HSP90AA1P07900 732 aaKnown RBP13.78□□□□□ -0.2
SPTAN1-201ENST00000358161 RGL3Q3MIN7 710 aa13.78□□□□□ -0.2
SPTAN1-201ENST00000358161 FKBP8Q14318 412 aa13.76□□□□□ -0.21
SPTAN1-201ENST00000358161 MYO15BQ96JP2 1530 aa13.76□□□□□ -0.21
SPTAN1-201ENST00000358161 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
SPTAN1-201ENST00000358161 CCDC88BA6NC98 1476 aa13.75□□□□□ -0.21
SPTAN1-201ENST00000358161 ZBTB7CA1YPR0 619 aa13.75□□□□□ -0.21
SPTAN1-201ENST00000358161 KANK1Q14678 1352 aa13.75□□□□□ -0.21
SPTAN1-201ENST00000358161 CARMIL2Q6F5E8 1435 aa13.75□□□□□ -0.21
SPTAN1-201ENST00000358161 MYH16Q9H6N6 1097 aa13.74□□□□□ -0.21
SPTAN1-201ENST00000358161 CFAP53Q96M91 514 aa13.74□□□□□ -0.21
SPTAN1-201ENST00000358161 A0A0G2JS52 829 aa13.73□□□□□ -0.21
SPTAN1-201ENST00000358161 HAP1P54257 671 aaPredicted RBP13.73□□□□□ -0.21
SPTAN1-201ENST00000358161 SENP3Q9H4L4 574 aaPredicted RBP13.73□□□□□ -0.21
SPTAN1-201ENST00000358161 KNSTRNQ9Y448 316 aa13.71□□□□□ -0.22
SPTAN1-201ENST00000358161 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
SPTAN1-201ENST00000358161 SOGA1O94964 1423 aa13.7□□□□□ -0.22
SPTAN1-201ENST00000358161 CCDC136Q96JN2 1154 aa13.7□□□□□ -0.22
SPTAN1-201ENST00000358161 CARD11Q9BXL7 1154 aa13.7□□□□□ -0.22
SPTAN1-201ENST00000358161 TRHP20396 242 aaPredicted RBP13.69□□□□□ -0.22
SPTAN1-201ENST00000358161 HDGFP51858 240 aaKnown RBP13.68□□□□□ -0.22
SPTAN1-201ENST00000358161 POGKQ9P215 609 aa13.68□□□□□ -0.22
SPTAN1-201ENST00000358161 ANP32BQ92688 251 aaKnown RBP13.67□□□□□ -0.22
SPTAN1-201ENST00000358161 HIRIP3Q9BW71 556 aaPredicted RBP13.67□□□□□ -0.22
SPTAN1-201ENST00000358161 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
SPTAN1-201ENST00000358161 WIZO95785 1651 aa13.66□□□□□ -0.22
SPTAN1-201ENST00000358161 ABCC8Q09428 1581 aa13.65□□□□□ -0.22
SPTAN1-201ENST00000358161 ARHGAP35Q9NRY4 1499 aa13.65□□□□□ -0.22
SPTAN1-201ENST00000358161 FMN1Q68DA7 1419 aa13.62□□□□□ -0.23
SPTAN1-201ENST00000358161 NUDCQ9Y266 331 aa13.6□□□□□ -0.23
SPTAN1-201ENST00000358161 PPM1GO15355 546 aaPredicted RBP13.6□□□□□ -0.23
SPTAN1-201ENST00000358161 CADPSQ9ULU8 1353 aa13.6□□□□□ -0.23
SPTAN1-201ENST00000358161 SMARCA4P51532 1647 aa13.59□□□□□ -0.23
SPTAN1-201ENST00000358161 VPS8Q8N3P4 1428 aa13.58□□□□□ -0.24
SPTAN1-201ENST00000358161 MAPK8IP3Q9UPT6 1336 aa13.58□□□□□ -0.24
SPTAN1-201ENST00000358161 TDRD9Q8NDG6 1382 aaKnown RBP13.58□□□□□ -0.24
SPTAN1-201ENST00000358161 MIER1Q8N108 512 aa13.56□□□□□ -0.24
SPTAN1-201ENST00000358161 PNNQ9H307 717 aaKnown RBP13.56□□□□□ -0.24
SPTAN1-201ENST00000358161 LMOD2Q6P5Q4 547 aa13.56□□□□□ -0.24
SPTAN1-201ENST00000358161 MLECQ14165 292 aa13.56□□□□□ -0.24
SPTAN1-201ENST00000358161 TMF1P82094 1093 aa13.55□□□□□ -0.24
SPTAN1-201ENST00000358161 EFCAB2Q5VUJ9 269 aa13.54□□□□□ -0.24
SPTAN1-201ENST00000358161 DCAF11Q8TEB1 546 aa13.54□□□□□ -0.24
SPTAN1-201ENST00000358161 ATAD2BQ9ULI0 1458 aa13.53□□□□□ -0.24
SPTAN1-201ENST00000358161 SETD5Q9C0A6 1442 aa13.52□□□□□ -0.24
SPTAN1-201ENST00000358161 TIMELESSQ9UNS1 1208 aa13.52□□□□□ -0.25
SPTAN1-201ENST00000358161 RAPGEF2Q9Y4G8 1499 aa13.52□□□□□ -0.25
SPTAN1-201ENST00000358161 EIF5BO60841 1220 aaKnown RBP13.51□□□□□ -0.25
SPTAN1-201ENST00000358161 FTSJ3Q8IY81 847 aaKnown RBP13.51□□□□□ -0.25
SPTAN1-201ENST00000358161 SIN3AQ96ST3 1273 aa13.51□□□□□ -0.25
SPTAN1-201ENST00000358161 GGT6Q6P531 493 aa13.5□□□□□ -0.25
SPTAN1-201ENST00000358161 ARXQ96QS3 562 aa13.5□□□□□ -0.25
SPTAN1-201ENST00000358161 ANKRD30AQ9BXX3 1397 aa13.49□□□□□ -0.25
SPTAN1-201ENST00000358161 CHMP4BQ9H444 224 aaKnown RBP13.48□□□□□ -0.25
SPTAN1-201ENST00000358161 CCDC18Q5T9S5 1454 aa13.47□□□□□ -0.25
SPTAN1-201ENST00000358161 SRPK2P78362 688 aaKnown RBP13.47□□□□□ -0.25
SPTAN1-201ENST00000358161 CASC1Q6TDU7 716 aa13.47□□□□□ -0.25
SPTAN1-201ENST00000358161 LAS1LQ9Y4W2 734 aaKnown RBP13.47□□□□□ -0.25
SPTAN1-201ENST00000358161 FANCD2Q9BXW9 1451 aa13.46□□□□□ -0.25
SPTAN1-201ENST00000358161 RSPH4AQ5TD94 716 aa13.45□□□□□ -0.26
SPTAN1-201ENST00000358161 BECN1Q14457 450 aa13.45□□□□□ -0.26
SPTAN1-201ENST00000358161 CC2D1BQ5T0F9 858 aaKnown RBP13.45□□□□□ -0.26
SPTAN1-201ENST00000358161 IRX6P78412 446 aaPredicted RBP13.45□□□□□ -0.26
SPTAN1-201ENST00000358161 PKD2Q13563 968 aa13.45□□□□□ -0.26
SPTAN1-201ENST00000358161 MS4A1P11836 297 aa13.44□□□□□ -0.26
SPTAN1-201ENST00000358161 TNNT2P45379 298 aaPredicted RBP13.44□□□□□ -0.26
SPTAN1-201ENST00000358161 NEUROD2Q15784 382 aa13.44□□□□□ -0.26
SPTAN1-201ENST00000358161 U2SURPO15042 1029 aaKnown RBP13.44□□□□□ -0.26
SPTAN1-201ENST00000358161 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
SPTAN1-201ENST00000358161 NPHP1O15259 732 aa13.42□□□□□ -0.26
SPTAN1-201ENST00000358161 NUP155O75694 1391 aa13.41□□□□□ -0.26
SPTAN1-201ENST00000358161 HDGFL2Q7Z4V5 671 aaPredicted RBP13.41□□□□□ -0.26
SPTAN1-201ENST00000358161 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
SPTAN1-201ENST00000358161 MORC1Q86VD1 984 aa13.4□□□□□ -0.26
SPTAN1-201ENST00000358161 EIF3AQ14152 1382 aaKnown RBP13.4□□□□□ -0.26
SPTAN1-201ENST00000358161 NCLP19338 710 aaKnown RBP13.38□□□□□ -0.27
SPTAN1-201ENST00000358161 KANK4Q5T7N3 995 aaPredicted RBP13.38□□□□□ -0.27
SPTAN1-201ENST00000358161 FHOD3Q2V2M9 1422 aa13.38□□□□□ -0.27
SPTAN1-201ENST00000358161 SPAG9O60271 1321 aaKnown RBP13.38□□□□□ -0.27
SPTAN1-201ENST00000358161 ROCK2O75116 1388 aaKnown RBP13.38□□□□□ -0.27
SPTAN1-201ENST00000358161 STK26Q9P289 416 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms