RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 LRRC9Q6ZRR7 1453 aa19■□□□□ 0.63
RNF220-202ENST00000355387 ABCA10Q8WWZ4 1543 aa18.99■□□□□ 0.63
RNF220-202ENST00000355387 AQRO60306 1485 aaKnown RBP eCLIP18.97■□□□□ 0.633e-7■■■■□ 24.8
RNF220-202ENST00000355387 CTTNBP2Q8WZ74 1663 aa18.97■□□□□ 0.63
RNF220-202ENST00000355387 FANCD2Q9BXW9 1451 aa18.96■□□□□ 0.63
RNF220-202ENST00000355387 PCF11O94913 1555 aaKnown RBP18.94■□□□□ 0.62
RNF220-202ENST00000355387 FYCO1Q9BQS8 1478 aa18.93■□□□□ 0.62
RNF220-202ENST00000355387 WDR97A6NE52 1622 aa18.93■□□□□ 0.62
RNF220-202ENST00000355387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.92■□□□□ 0.629e-9■□□□□ 9.2
RNF220-202ENST00000355387 MAPKBP1O60336 1514 aa18.91■□□□□ 0.62
RNF220-202ENST00000355387 TOPBP1Q92547 1522 aa18.89■□□□□ 0.62
RNF220-202ENST00000355387 SETD5Q9C0A6 1442 aa18.87■□□□□ 0.61
RNF220-202ENST00000355387 POLA1P09884 1462 aaPredicted RBP18.87■□□□□ 0.61
RNF220-202ENST00000355387 RAB3GAP2Q9H2M9 1393 aa18.87■□□□□ 0.61
RNF220-202ENST00000355387 CASKIN1Q8WXD9 1431 aa18.86■□□□□ 0.61
RNF220-202ENST00000355387 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
RNF220-202ENST00000355387 PHLDB1Q86UU1 1377 aa18.82■□□□□ 0.6
RNF220-202ENST00000355387 KIF21AQ7Z4S6 1674 aa18.81■□□□□ 0.6
RNF220-202ENST00000355387 ABCA5Q8WWZ7 1642 aa18.8■□□□□ 0.6
RNF220-202ENST00000355387 THOC2Q8NI27 1593 aaKnown RBP18.8■□□□□ 0.6
RNF220-202ENST00000355387 TIMELESSQ9UNS1 1208 aa18.8■□□□□ 0.6
RNF220-202ENST00000355387 SAMD9Q5K651 1589 aa18.8■□□□□ 0.6
RNF220-202ENST00000355387 YTHDC1Q96MU7 727 aaKnown RBP18.78■□□□□ 0.6
RNF220-202ENST00000355387 FMN1Q68DA7 1419 aa18.78■□□□□ 0.6
RNF220-202ENST00000355387 RAD54L2Q9Y4B4 1467 aa18.76■□□□□ 0.59
RNF220-202ENST00000355387 SNAPC4Q5SXM2 1469 aa18.75■□□□□ 0.59
RNF220-202ENST00000355387 FHOD3Q2V2M9 1422 aa18.72■□□□□ 0.59
RNF220-202ENST00000355387 URB2Q14146 1524 aaKnown RBP18.69■□□□□ 0.58
RNF220-202ENST00000355387 LRRIQ1Q96JM4 1722 aa18.68■□□□□ 0.58
RNF220-202ENST00000355387 FGD6Q6ZV73 1430 aa18.66■□□□□ 0.58
RNF220-202ENST00000355387 NESP48681 1621 aa18.65■□□□□ 0.58
RNF220-202ENST00000355387 GRIN2BQ13224 1484 aa18.64■□□□□ 0.58
RNF220-202ENST00000355387 SUPT6HQ7KZ85 1726 aaKnown RBP18.64■□□□□ 0.57
RNF220-202ENST00000355387 EHBP1L1Q8N3D4 1523 aa18.64■□□□□ 0.57
RNF220-202ENST00000355387 ITGAEP38570 1179 aa18.62■□□□□ 0.57
RNF220-202ENST00000355387 HFM1A2PYH4 1435 aa18.61■□□□□ 0.57
RNF220-202ENST00000355387 GAPVD1Q14C86 1478 aa18.61■□□□□ 0.57
RNF220-202ENST00000355387 PTPN23Q9H3S7 1636 aa18.61■□□□□ 0.57
RNF220-202ENST00000355387 ARHGEF11O15085 1522 aa18.6■□□□□ 0.57
RNF220-202ENST00000355387 PDS5BQ9NTI5 1447 aa18.6■□□□□ 0.57
RNF220-202ENST00000355387 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
RNF220-202ENST00000355387 FAM50AQ14320 339 aaKnown RBP18.58■□□□□ 0.57
RNF220-202ENST00000355387 CCDC18Q5T9S5 1454 aa18.58■□□□□ 0.56
RNF220-202ENST00000355387 UACAQ9BZF9 1416 aa18.57■□□□□ 0.56
RNF220-202ENST00000355387 MYOM3Q5VTT5 1437 aa18.56■□□□□ 0.56
RNF220-202ENST00000355387 UGGT2Q9NYU1 1516 aa18.56■□□□□ 0.56
RNF220-202ENST00000355387 PBRM1Q86U86 1689 aa18.55■□□□□ 0.56
RNF220-202ENST00000355387 GCC2Q8IWJ2 1684 aa18.55■□□□□ 0.56
RNF220-202ENST00000355387 NCOA2Q15596 1464 aa18.54■□□□□ 0.56
RNF220-202ENST00000355387 MTUS2Q5JR59 1369 aa18.53■□□□□ 0.56
RNF220-202ENST00000355387 HECW1Q76N89 1606 aa18.53■□□□□ 0.56
RNF220-202ENST00000355387 TCOF1Q13428 1488 aaKnown RBP18.53■□□□□ 0.56
RNF220-202ENST00000355387 AKNAQ7Z591 1439 aa18.52■□□□□ 0.56
RNF220-202ENST00000355387 P3H3Q8IVL6 736 aa18.52■□□□□ 0.55
RNF220-202ENST00000355387 PPP1R15AO75807 674 aaPredicted RBP18.5■□□□□ 0.55
RNF220-202ENST00000355387 NAIPQ13075 1403 aa18.48■□□□□ 0.55
RNF220-202ENST00000355387 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
RNF220-202ENST00000355387 SUPT16HQ9Y5B9 1047 aaKnown RBP18.47■□□□□ 0.55
RNF220-202ENST00000355387 PTPRKQ15262 1439 aa18.46■□□□□ 0.55
RNF220-202ENST00000355387 SIN3AQ96ST3 1273 aa18.46■□□□□ 0.55
RNF220-202ENST00000355387 IQGAP2Q13576 1575 aa18.46■□□□□ 0.55
RNF220-202ENST00000355387 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
RNF220-202ENST00000355387 CCER2I3L3R5 266 aa18.44■□□□□ 0.54
RNF220-202ENST00000355387 ATP1B4Q9UN42 357 aaPredicted RBP18.43■□□□□ 0.54
RNF220-202ENST00000355387 MAGI3Q5TCQ9 1506 aa18.42■□□□□ 0.54
RNF220-202ENST00000355387 KDM5BQ9UGL1 1544 aa18.41■□□□□ 0.54
RNF220-202ENST00000355387 MIA2Q96PC5 1412 aa18.41■□□□□ 0.54
RNF220-202ENST00000355387 TONSLQ96HA7 1378 aa18.41■□□□□ 0.54
RNF220-202ENST00000355387 WDR62O43379 1518 aa18.39■□□□□ 0.54
RNF220-202ENST00000355387 EPRSP07814 1512 aaKnown RBP18.37■□□□□ 0.53
RNF220-202ENST00000355387 MRC2Q9UBG0 1479 aa18.34■□□□□ 0.53
RNF220-202ENST00000355387 DDX10Q13206 875 aaKnown RBP18.34■□□□□ 0.53
RNF220-202ENST00000355387 ANP32CO43423 234 aa18.29■□□□□ 0.52
RNF220-202ENST00000355387 DENND4BO75064 1496 aaPredicted RBP18.28■□□□□ 0.52
RNF220-202ENST00000355387 ROCK1Q13464 1354 aa18.28■□□□□ 0.52
RNF220-202ENST00000355387 DNMT1P26358 1616 aaKnown RBP18.28■□□□□ 0.52
RNF220-202ENST00000355387 KIAA0556O60303 1618 aa18.27■□□□□ 0.52
RNF220-202ENST00000355387 IFT140Q96RY7 1462 aa18.27■□□□□ 0.52
RNF220-202ENST00000355387 KCNH8Q96L42 1107 aa18.26■□□□□ 0.51
RNF220-202ENST00000355387 POLR1AO95602 1720 aaPredicted RBP18.24■□□□□ 0.51
RNF220-202ENST00000355387 KIAA0586Q9BVV6 1533 aa18.24■□□□□ 0.51
RNF220-202ENST00000355387 KDM6BO15054 1643 aa18.23■□□□□ 0.51
RNF220-202ENST00000355387 CDK13Q14004 1512 aaKnown RBP18.23■□□□□ 0.51
RNF220-202ENST00000355387 RAPGEF6Q8TEU7 1601 aa18.22■□□□□ 0.51
RNF220-202ENST00000355387 ITSN2Q9NZM3 1697 aa18.2■□□□□ 0.5
RNF220-202ENST00000355387 DISP1Q96F81 1524 aa18.19■□□□□ 0.5
RNF220-202ENST00000355387 ADCY10Q96PN6 1610 aa18.19■□□□□ 0.5
RNF220-202ENST00000355387 ADGBQ8N7X0 1667 aa18.19■□□□□ 0.5
RNF220-202ENST00000355387 DAPK1P53355 1430 aa18.18■□□□□ 0.5
RNF220-202ENST00000355387 RPRD2Q5VT52 1461 aaKnown RBP18.16■□□□□ 0.5
RNF220-202ENST00000355387 TSHZ2Q9NRE2 1034 aa18.15■□□□□ 0.5
RNF220-202ENST00000355387 NUP153P49790 1475 aaKnown RBP18.15■□□□□ 0.5
RNF220-202ENST00000355387 CROCC2H7BZ55 1655 aa18.14■□□□□ 0.49
RNF220-202ENST00000355387 GRIN2AQ12879 1464 aa18.13■□□□□ 0.49
RNF220-202ENST00000355387 EIF4G3O43432 1585 aaKnown RBP18.13■□□□□ 0.49
RNF220-202ENST00000355387 TEX14Q8IWB6 1497 aa18.12■□□□□ 0.49
RNF220-202ENST00000355387 ABCC5O15440 1437 aa18.12■□□□□ 0.49
RNF220-202ENST00000355387 CNTLNQ9NXG0 1405 aa18.11■□□□□ 0.49
RNF220-202ENST00000355387 MPHOSPH9Q99550 1183 aa18.11■□□□□ 0.49
RNF220-202ENST00000355387 NEFLP07196 543 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms