RNA–Protein interactions for RNA: ENST00000352385.2

IGDCC4-201, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IGDCC4, Length 6,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-201ENST00000352385 CDK11BP21127 795 aaKnown RBP27.64■■■□□ 2.02
IGDCC4-201ENST00000352385 MTUS2Q5JR59 1369 aa27.62■■■□□ 2.01
IGDCC4-201ENST00000352385 C14orf37Q86TY3 774 aa27.58■■■□□ 2.01
IGDCC4-201ENST00000352385 DDRGK1Q96HY6 314 aa27.58■■■□□ 2
IGDCC4-201ENST00000352385 BECN1Q14457 450 aa27.57■■■□□ 2
IGDCC4-201ENST00000352385 EIF4G2P78344 907 aaKnown RBP eCLIP27.57■■■□□ 2
IGDCC4-201ENST00000352385 SENP3-EIF4A1A0A087X0R7 540 aa27.56■■■□□ 2
IGDCC4-201ENST00000352385 RRP7BPQ9NSQ0 103 aa27.56■■■□□ 2
IGDCC4-201ENST00000352385 NCLP19338 710 aaKnown RBP27.55■■■□□ 2
IGDCC4-201ENST00000352385 TRIM44Q96DX7 344 aaPredicted RBP27.52■■■□□ 2
IGDCC4-201ENST00000352385 TPRNQ4KMQ1 711 aa27.45■■□□□ 1.99
IGDCC4-201ENST00000352385 PPP1R15AO75807 674 aaPredicted RBP27.45■■□□□ 1.98
IGDCC4-201ENST00000352385 GOLGA6L22H0YM25 854 aa27.43■■□□□ 1.98
IGDCC4-201ENST00000352385 CHMP7Q8WUX9 453 aaPredicted RBP27.42■■□□□ 1.98
IGDCC4-201ENST00000352385 RGL3Q3MIN7 710 aa27.4■■□□□ 1.98
IGDCC4-201ENST00000352385 CLIP1P30622 1438 aa27.39■■□□□ 1.98
IGDCC4-201ENST00000352385 KCNH8Q96L42 1107 aa27.36■■□□□ 1.97
IGDCC4-201ENST00000352385 PTMAP06454 111 aaKnown RBP27.35■■□□□ 1.97
IGDCC4-201ENST00000352385 PPM1GO15355 546 aaPredicted RBP27.33■■□□□ 1.97
IGDCC4-201ENST00000352385 ANP32EQ9BTT0 268 aa27.33■■□□□ 1.97
IGDCC4-201ENST00000352385 CFAP53Q96M91 514 aa27.32■■□□□ 1.96
IGDCC4-201ENST00000352385 CASC1Q6TDU7 716 aa27.32■■□□□ 1.96
IGDCC4-201ENST00000352385 FTSJ3Q8IY81 847 aaKnown RBP27.31■■□□□ 1.96
IGDCC4-201ENST00000352385 SUPT16HQ9Y5B9 1047 aaKnown RBP27.3■■□□□ 1.96
IGDCC4-201ENST00000352385 ZRSR1Q15695 479 aaKnown RBP27.3■■□□□ 1.96
IGDCC4-201ENST00000352385 LAS1LQ9Y4W2 734 aaKnown RBP27.28■■□□□ 1.96
IGDCC4-201ENST00000352385 KNSTRNQ9Y448 316 aa27.27■■□□□ 1.96
IGDCC4-201ENST00000352385 DNTTIP2Q5QJE6 756 aaKnown RBP27.25■■□□□ 1.95
IGDCC4-201ENST00000352385 NEUROD2Q15784 382 aa27.25■■□□□ 1.95
IGDCC4-201ENST00000352385 TULP1O00294 542 aaPredicted RBP27.24■■□□□ 1.95
IGDCC4-201ENST00000352385 HAP1P54257 671 aaPredicted RBP27.22■■□□□ 1.95
IGDCC4-201ENST00000352385 ZCCHC6Q5VYS8 1495 aaKnown RBP27.21■■□□□ 1.95
IGDCC4-201ENST00000352385 RTN4Q9NQC3 1192 aaKnown RBP27.2■■□□□ 1.95
IGDCC4-201ENST00000352385 RSF1Q96T23 1441 aaPredicted RBP27.2■■□□□ 1.94
IGDCC4-201ENST00000352385 CARD11Q9BXL7 1154 aa27.18■■□□□ 1.94
IGDCC4-201ENST00000352385 TAOK2Q9UL54 1235 aa27.18■■□□□ 1.94
IGDCC4-201ENST00000352385 PLEKHD1A6NEE1 506 aa27.16■■□□□ 1.94
IGDCC4-201ENST00000352385 CDCA8Q53HL2 280 aa27.16■■□□□ 1.94
IGDCC4-201ENST00000352385 RGS3P49796 1198 aa27.15■■□□□ 1.94
IGDCC4-201ENST00000352385 MAPK8IP3Q9UPT6 1336 aa27.14■■□□□ 1.94
IGDCC4-201ENST00000352385 TNNT2P45379 298 aaPredicted RBP27.13■■□□□ 1.93
IGDCC4-201ENST00000352385 FRAT1Q92837 279 aaPredicted RBP27.12■■□□□ 1.93
IGDCC4-201ENST00000352385 CEP162Q5TB80 1403 aa27.11■■□□□ 1.93
IGDCC4-201ENST00000352385 ARID4BQ4LE39 1312 aaPredicted RBP27.11■■□□□ 1.93
IGDCC4-201ENST00000352385 NAP1L5Q96NT1 182 aaPredicted RBP27.11■■□□□ 1.93
IGDCC4-201ENST00000352385 GOLGA3Q08378 1498 aa27.1■■□□□ 1.93
IGDCC4-201ENST00000352385 PLCB2Q00722 1185 aa27.1■■□□□ 1.93
IGDCC4-201ENST00000352385 CC2D1BQ5T0F9 858 aaKnown RBP27.06■■□□□ 1.92
IGDCC4-201ENST00000352385 CFDP1Q9UEE9 299 aaPredicted RBP27.05■■□□□ 1.92
IGDCC4-201ENST00000352385 PPP4R2Q9NY27 417 aa27.04■■□□□ 1.92
IGDCC4-201ENST00000352385 HSP90AB1P08238 724 aaKnown RBP27.04■■□□□ 1.92
IGDCC4-201ENST00000352385 NUDCQ9Y266 331 aa27.02■■□□□ 1.92
IGDCC4-201ENST00000352385 NOP58Q9Y2X3 529 aaKnown RBP27.01■■□□□ 1.91
IGDCC4-201ENST00000352385 MYO15BQ96JP2 1530 aa27.01■■□□□ 1.91
IGDCC4-201ENST00000352385 ERICH6BQ5W0A0 696 aa27.01■■□□□ 1.91
IGDCC4-201ENST00000352385 OS9Q13438 667 aaPredicted RBP27■■□□□ 1.91
IGDCC4-201ENST00000352385 LMOD2Q6P5Q4 547 aa27■■□□□ 1.91
IGDCC4-201ENST00000352385 POGKQ9P215 609 aa26.99■■□□□ 1.91
IGDCC4-201ENST00000352385 SIN3AQ96ST3 1273 aa26.98■■□□□ 1.91
IGDCC4-201ENST00000352385 NAP1L2Q9ULW6 460 aaPredicted RBP26.96■■□□□ 1.91
IGDCC4-201ENST00000352385 U2SURPO15042 1029 aaKnown RBP26.95■■□□□ 1.91
IGDCC4-201ENST00000352385 FGD1P98174 961 aa26.94■■□□□ 1.9
IGDCC4-201ENST00000352385 NPHP1O15259 732 aa26.93■■□□□ 1.9
IGDCC4-201ENST00000352385 AMER1Q5JTC6 1135 aaPredicted RBP26.92■■□□□ 1.9
IGDCC4-201ENST00000352385 B4GALNT3Q6L9W6 998 aa26.92■■□□□ 1.9
IGDCC4-201ENST00000352385 GOLGA6L6A8MZA4 724 aa26.91■■□□□ 1.9
IGDCC4-201ENST00000352385 KCNJ4P48050 445 aa26.9■■□□□ 1.9
IGDCC4-201ENST00000352385 EEA1Q15075 1411 aa26.86■■□□□ 1.89
IGDCC4-201ENST00000352385 CHMP4BQ9H444 224 aaKnown RBP26.86■■□□□ 1.89
IGDCC4-201ENST00000352385 CCDC180Q9P1Z9 1646 aa26.85■■□□□ 1.89
IGDCC4-201ENST00000352385 SPRYD3Q8NCJ5 442 aa26.84■■□□□ 1.89
IGDCC4-201ENST00000352385 MS4A1P11836 297 aa26.83■■□□□ 1.89
IGDCC4-201ENST00000352385 HSCBQ8IWL3 235 aa26.82■■□□□ 1.88
IGDCC4-201ENST00000352385 GOLGA2Q08379 1002 aa26.78■■□□□ 1.88
IGDCC4-201ENST00000352385 PNNQ9H307 717 aaKnown RBP26.78■■□□□ 1.88
IGDCC4-201ENST00000352385 GOLGA6L4A6NEF3 574 aa26.77■■□□□ 1.88
IGDCC4-201ENST00000352385 WRNQ14191 1432 aaPredicted RBP eCLIP26.77■■□□□ 1.88
IGDCC4-201ENST00000352385 SOX12O15370 315 aa26.75■■□□□ 1.87
IGDCC4-201ENST00000352385 TMF1P82094 1093 aa26.75■■□□□ 1.87
IGDCC4-201ENST00000352385 DCAF11Q8TEB1 546 aa26.74■■□□□ 1.87
IGDCC4-201ENST00000352385 KIF27Q86VH2 1401 aa26.73■■□□□ 1.87
IGDCC4-201ENST00000352385 NRDCO43847 1150 aa26.72■■□□□ 1.87
IGDCC4-201ENST00000352385 CEP164Q9UPV0 1460 aa26.72■■□□□ 1.87
IGDCC4-201ENST00000352385 TNIKQ9UKE5 1360 aa26.71■■□□□ 1.87
IGDCC4-201ENST00000352385 DRC7Q8IY82 874 aa26.68■■□□□ 1.86
IGDCC4-201ENST00000352385 MCCP23508 829 aa26.68■■□□□ 1.86
IGDCC4-201ENST00000352385 CHAF1AQ13111 956 aaPredicted RBP26.68■■□□□ 1.86
IGDCC4-201ENST00000352385 MSNP26038 577 aaKnown RBP26.67■■□□□ 1.86
IGDCC4-201ENST00000352385 SRPK2P78362 688 aaKnown RBP26.66■■□□□ 1.86
IGDCC4-201ENST00000352385 CCNB3Q8WWL7 1395 aa26.66■■□□□ 1.86
IGDCC4-201ENST00000352385 MORC1Q86VD1 984 aa26.65■■□□□ 1.86
IGDCC4-201ENST00000352385 SAFB2Q14151 953 aaKnown RBP eCLIP26.65■■□□□ 1.86
IGDCC4-201ENST00000352385 CLSTN1O94985 981 aa26.64■■□□□ 1.86
IGDCC4-201ENST00000352385 L1TD1Q5T7N2 865 aaKnown RBP26.63■■□□□ 1.85
IGDCC4-201ENST00000352385 APBB1O00213 710 aa26.61■■□□□ 1.85
IGDCC4-201ENST00000352385 DEKP35659 375 aaKnown RBP26.61■■□□□ 1.85
IGDCC4-201ENST00000352385 BAZ1BQ9UIG0 1483 aaKnown RBP26.61■■□□□ 1.85
IGDCC4-201ENST00000352385 KANK1Q14678 1352 aa26.59■■□□□ 1.85
IGDCC4-201ENST00000352385 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.85
IGDCC4-201ENST00000352385 RB1CC1Q8TDY2 1594 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms