RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 B4GALNT3Q6L9W6 998 aa15.69■□□□□ 0.1
CDK5RAP2-201ENST00000349780 SALL2Q9Y467 1007 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP2-201ENST00000349780 L1TD1Q5T7N2 865 aaKnown RBP15.66■□□□□ 0.1
CDK5RAP2-201ENST00000349780 MRS2Q9HD23 443 aa15.66■□□□□ 0.1
CDK5RAP2-201ENST00000349780 TIMELESSQ9UNS1 1208 aa15.66■□□□□ 0.1
CDK5RAP2-201ENST00000349780 PNNQ9H307 717 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP2-201ENST00000349780 ZNF326Q5BKZ1 582 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP2-201ENST00000349780 SLC24A1O60721 1099 aa15.61■□□□□ 0.09
CDK5RAP2-201ENST00000349780 HIRIP3Q9BW71 556 aaPredicted RBP15.61■□□□□ 0.09
CDK5RAP2-201ENST00000349780 TONSLQ96HA7 1378 aa15.6■□□□□ 0.09
CDK5RAP2-201ENST00000349780 FANCIQ9NVI1 1328 aa15.6■□□□□ 0.09
CDK5RAP2-201ENST00000349780 A0A0U1RQG5 324 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP2-201ENST00000349780 SLC4A1APQ9BWU0 796 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP2-201ENST00000349780 DNTTIP2Q5QJE6 756 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP2-201ENST00000349780 IPO9Q96P70 1041 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP2-201ENST00000349780 PTMAP06454 111 aaKnown RBP15.52■□□□□ 0.08
CDK5RAP2-201ENST00000349780 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP2-201ENST00000349780 ARID3AQ99856 593 aa15.52■□□□□ 0.08
CDK5RAP2-201ENST00000349780 TMC1Q8TDI8 760 aa15.52■□□□□ 0.07
CDK5RAP2-201ENST00000349780 MSNP26038 577 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP2-201ENST00000349780 GOLGA6L22H0YM25 854 aa15.49■□□□□ 0.07
CDK5RAP2-201ENST00000349780 USP35Q9P2H5 1018 aa15.49■□□□□ 0.07
CDK5RAP2-201ENST00000349780 UBE2Q2Q8WVN8 375 aa15.48■□□□□ 0.07
CDK5RAP2-201ENST00000349780 IL27Q8NEV9 243 aa15.46■□□□□ 0.06
CDK5RAP2-201ENST00000349780 GSE1Q14687 1217 aa15.45■□□□□ 0.06
CDK5RAP2-201ENST00000349780 FBLN2P98095 1184 aa15.42■□□□□ 0.06
CDK5RAP2-201ENST00000349780 CCER2I3L3R5 266 aa15.41■□□□□ 0.06
CDK5RAP2-201ENST00000349780 SENP3-EIF4A1A0A087X0R7 540 aa15.37■□□□□ 0.05
CDK5RAP2-201ENST00000349780 GOLGA6L3A6NEY3 463 aa15.36■□□□□ 0.05
CDK5RAP2-201ENST00000349780 RGS3P49796 1198 aa15.34■□□□□ 0.05
CDK5RAP2-201ENST00000349780 GZF1Q9H116 711 aaPredicted RBP15.33■□□□□ 0.05
CDK5RAP2-201ENST00000349780 TCERG1O14776 1098 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP2-201ENST00000349780 TNNT3P45378 269 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP2-201ENST00000349780 CHAF1AQ13111 956 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP2-201ENST00000349780 EIF4G2P78344 907 aaKnown RBP eCLIP15.29■□□□□ 0.048e-7■■■■■ 28.7
CDK5RAP2-201ENST00000349780 BRPF3Q9ULD4 1205 aa15.27■□□□□ 0.03
CDK5RAP2-201ENST00000349780 SPRYD3Q8NCJ5 442 aa15.26■□□□□ 0.03
CDK5RAP2-201ENST00000349780 ZBTB7CA1YPR0 619 aa15.25■□□□□ 0.03
CDK5RAP2-201ENST00000349780 WDR43Q15061 677 aaKnown RBP eCLIP15.23■□□□□ 0.03
CDK5RAP2-201ENST00000349780 SLKQ9H2G2 1235 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP2-201ENST00000349780 KCNH8Q96L42 1107 aa15.23■□□□□ 0.03
CDK5RAP2-201ENST00000349780 CEP162Q5TB80 1403 aa15.22■□□□□ 0.03
CDK5RAP2-201ENST00000349780 HSP90AB1P08238 724 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP2-201ENST00000349780 PLCB2Q00722 1185 aa15.21■□□□□ 0.02
CDK5RAP2-201ENST00000349780 MYH16Q9H6N6 1097 aa15.2■□□□□ 0.02
CDK5RAP2-201ENST00000349780 HSCBQ8IWL3 235 aa15.19■□□□□ 0.02
CDK5RAP2-201ENST00000349780 FAM43AQ8N2R8 423 aa15.19■□□□□ 0.02
CDK5RAP2-201ENST00000349780 MSH5O43196 834 aa15.16■□□□□ 0.02
CDK5RAP2-201ENST00000349780 FAM13BQ9NYF5 915 aa15.16■□□□□ 0.02
CDK5RAP2-201ENST00000349780 TPRNQ4KMQ1 711 aa15.15■□□□□ 0.02
CDK5RAP2-201ENST00000349780 SLC4A3P48751 1232 aa15.14■□□□□ 0.01
CDK5RAP2-201ENST00000349780 FRAT1Q92837 279 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP2-201ENST00000349780 PTMSP20962 102 aa15.13■□□□□ 0.01
CDK5RAP2-201ENST00000349780 SIN3AQ96ST3 1273 aa15.13■□□□□ 0.01
CDK5RAP2-201ENST00000349780 PDE4AP27815 886 aa15.12■□□□□ 0.01
CDK5RAP2-201ENST00000349780 KIAA2012Q0VF49 1180 aa15.12■□□□□ 0.01
CDK5RAP2-201ENST00000349780 RRP9O43818 475 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP2-201ENST00000349780 GBP4Q96PP9 640 aa15.12■□□□□ 0.01
CDK5RAP2-201ENST00000349780 ZMYND15Q9H091 742 aa15.11■□□□□ 0.01
CDK5RAP2-201ENST00000349780 EEA1Q15075 1411 aa15.11■□□□□ 0.01
CDK5RAP2-201ENST00000349780 PAK3O75914 559 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP2-201ENST00000349780 ZNF771Q7L3S4 317 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP2-201ENST00000349780 SCRIBQ14160 1630 aa15.1■□□□□ 0.01
CDK5RAP2-201ENST00000349780 CLIP1P30622 1438 aa15.1■□□□□ 0.01
CDK5RAP2-201ENST00000349780 P3H3Q8IVL6 736 aa15.08■□□□□ 0.01
CDK5RAP2-201ENST00000349780 NFKBIBQ15653 356 aa15.08■□□□□ 0
CDK5RAP2-201ENST00000349780 PDE4CQ08493 712 aa15.07■□□□□ 0
CDK5RAP2-201ENST00000349780 NPM1P06748 294 aaKnown RBP eCLIP15.07■□□□□ 0
CDK5RAP2-201ENST00000349780 TPM2P07951 284 aa15.06■□□□□ 0
CDK5RAP2-201ENST00000349780 MAP7D2Q96T17 732 aa15.04■□□□□ -0
CDK5RAP2-201ENST00000349780 NUDCQ9Y266 331 aa15.04■□□□□ -0
CDK5RAP2-201ENST00000349780 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.03■□□□□ -0
CDK5RAP2-201ENST00000349780 RCAN3Q9UKA8 241 aa15.02□□□□□ -0.01
CDK5RAP2-201ENST00000349780 APPP05067 770 aa15.01□□□□□ -0.01
CDK5RAP2-201ENST00000349780 ESF1Q9H501 851 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP2-201ENST00000349780 GOLGA6L6A8MZA4 724 aa15□□□□□ -0.01
CDK5RAP2-201ENST00000349780 DDX11L8A8MPP1 907 aa14.99□□□□□ -0.01
CDK5RAP2-201ENST00000349780 DRC7Q8IY82 874 aa14.99□□□□□ -0.01
CDK5RAP2-201ENST00000349780 TNIKQ9UKE5 1360 aa14.99□□□□□ -0.01
CDK5RAP2-201ENST00000349780 MTERF4Q7Z6M4 381 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP2-201ENST00000349780 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
CDK5RAP2-201ENST00000349780 CASC1Q6TDU7 716 aa14.97□□□□□ -0.01
CDK5RAP2-201ENST00000349780 CHIC2Q9UKJ5 165 aa14.97□□□□□ -0.01
CDK5RAP2-201ENST00000349780 GOLGA3Q08378 1498 aa14.97□□□□□ -0.01
CDK5RAP2-201ENST00000349780 RBM10P98175 930 aaKnown RBP14.96□□□□□ -0.01
CDK5RAP2-201ENST00000349780 FTSJ3Q8IY81 847 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP2-201ENST00000349780 ZRSR1Q15695 479 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP2-201ENST00000349780 MS4A1P11836 297 aa14.94□□□□□ -0.02
CDK5RAP2-201ENST00000349780 R3HCC1Q9Y3T6 440 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP2-201ENST00000349780 CSPP1Q1MSJ5 1256 aa14.93□□□□□ -0.02
CDK5RAP2-201ENST00000349780 FAM161AQ3B820 660 aa14.93□□□□□ -0.02
CDK5RAP2-201ENST00000349780 PLEKHG5O94827 1062 aa14.92□□□□□ -0.02
CDK5RAP2-201ENST00000349780 NRDCO43847 1150 aa14.92□□□□□ -0.02
CDK5RAP2-201ENST00000349780 CALD1Q05682 793 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP2-201ENST00000349780 KDM2AQ9Y2K7 1162 aa14.92□□□□□ -0.02
CDK5RAP2-201ENST00000349780 ARID3CA6NKF2 412 aa14.89□□□□□ -0.03
CDK5RAP2-201ENST00000349780 HSPA5P11021 654 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP2-201ENST00000349780 SKOR2Q2VWA4 1001 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP2-201ENST00000349780 MRE11P49959 708 aa14.88□□□□□ -0.03
CDK5RAP2-201ENST00000349780 BAZ1BQ9UIG0 1483 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms