RNA–Protein interactions for RNA: ENST00000349499.2

CLIC6-201, Transcript of chloride intracellular channel 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLIC6, Length 3,806 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC6-201ENST00000349499 CCNB3Q8WWL7 1395 aa24.06■■□□□ 1.44
CLIC6-201ENST00000349499 RAB3GAP2Q9H2M9 1393 aa24.05■■□□□ 1.44
CLIC6-201ENST00000349499 NPM2Q86SE8 214 aaKnown RBP24.05■■□□□ 1.44
CLIC6-201ENST00000349499 RRP7BPQ9NSQ0 103 aa24.04■■□□□ 1.44
CLIC6-201ENST00000349499 KIF21BO75037 1637 aa24.03■■□□□ 1.44
CLIC6-201ENST00000349499 SMARCA4P51532 1647 aa23.98■■□□□ 1.43
CLIC6-201ENST00000349499 RTL5Q5HYW3 569 aaPredicted RBP23.95■■□□□ 1.43
CLIC6-201ENST00000349499 ZNF777Q9ULD5 760 aaPredicted RBP23.95■■□□□ 1.42
CLIC6-201ENST00000349499 DEKP35659 375 aaKnown RBP23.95■■□□□ 1.42
CLIC6-201ENST00000349499 B4GALNT3Q6L9W6 998 aa23.95■■□□□ 1.42
CLIC6-201ENST00000349499 MRS2Q9HD23 443 aa23.93■■□□□ 1.42
CLIC6-201ENST00000349499 PPP1R15AO75807 674 aaPredicted RBP23.92■■□□□ 1.42
CLIC6-201ENST00000349499 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
CLIC6-201ENST00000349499 ATAD2BQ9ULI0 1458 aa23.87■■□□□ 1.41
CLIC6-201ENST00000349499 CCER2I3L3R5 266 aa23.86■■□□□ 1.41
CLIC6-201ENST00000349499 FBLN2P98095 1184 aa23.86■■□□□ 1.41
CLIC6-201ENST00000349499 DAXXQ9UER7 740 aaPredicted RBP23.83■■□□□ 1.41
CLIC6-201ENST00000349499 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
CLIC6-201ENST00000349499 ARAP1Q96P48 1450 aa23.79■■□□□ 1.4
CLIC6-201ENST00000349499 SETD5Q9C0A6 1442 aa23.79■■□□□ 1.4
CLIC6-201ENST00000349499 FOXD1Q16676 465 aa23.78■■□□□ 1.4
CLIC6-201ENST00000349499 FANCIQ9NVI1 1328 aa23.77■■□□□ 1.4
CLIC6-201ENST00000349499 MYT1LQ9UL68 1186 aa23.77■■□□□ 1.4
CLIC6-201ENST00000349499 MTUS2Q5JR59 1369 aa23.76■■□□□ 1.39
CLIC6-201ENST00000349499 RTN4Q9NQC3 1192 aaKnown RBP23.75■■□□□ 1.39
CLIC6-201ENST00000349499 KDM2AQ9Y2K7 1162 aa23.74■■□□□ 1.39
CLIC6-201ENST00000349499 CCDC136Q96JN2 1154 aa23.74■■□□□ 1.39
CLIC6-201ENST00000349499 BICRAQ9NZM4 1560 aa23.73■■□□□ 1.39
CLIC6-201ENST00000349499 RRBP1Q9P2E9 1410 aaKnown RBP23.73■■□□□ 1.39
CLIC6-201ENST00000349499 PPP4R2Q9NY27 417 aa23.72■■□□□ 1.39
CLIC6-201ENST00000349499 SLC4A1APQ9BWU0 796 aaKnown RBP23.72■■□□□ 1.39
CLIC6-201ENST00000349499 EIF4G2P78344 907 aaKnown RBP eCLIP23.68■■□□□ 1.38
CLIC6-201ENST00000349499 NOP58Q9Y2X3 529 aaKnown RBP23.68■■□□□ 1.38
CLIC6-201ENST00000349499 DNAJC5BQ9UF47 199 aa23.67■■□□□ 1.38
CLIC6-201ENST00000349499 ANP32AP39687 249 aaKnown RBP23.67■■□□□ 1.38
CLIC6-201ENST00000349499 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
CLIC6-201ENST00000349499 PAK3O75914 559 aaPredicted RBP23.64■■□□□ 1.38
CLIC6-201ENST00000349499 UNC13AQ9UPW8 1703 aa23.63■■□□□ 1.37
CLIC6-201ENST00000349499 CCDC184Q52MB2 194 aa23.63■■□□□ 1.37
CLIC6-201ENST00000349499 PRKCSHP14314 528 aaPredicted RBP23.62■■□□□ 1.37
CLIC6-201ENST00000349499 TMC1Q8TDI8 760 aa23.62■■□□□ 1.37
CLIC6-201ENST00000349499 MAPKBP1O60336 1514 aa23.62■■□□□ 1.37
CLIC6-201ENST00000349499 ANO8Q9HCE9 1232 aaPredicted RBP23.61■■□□□ 1.37
CLIC6-201ENST00000349499 PHLDB1Q86UU1 1377 aa23.57■■□□□ 1.36
CLIC6-201ENST00000349499 ZBTB47Q9UFB7 747 aaPredicted RBP23.56■■□□□ 1.36
CLIC6-201ENST00000349499 HSPA5P11021 654 aaKnown RBP23.54■■□□□ 1.36
CLIC6-201ENST00000349499 CUX2O14529 1486 aa23.52■■□□□ 1.36
CLIC6-201ENST00000349499 TIMELESSQ9UNS1 1208 aa23.5■■□□□ 1.35
CLIC6-201ENST00000349499 ARHGAP35Q9NRY4 1499 aa23.49■■□□□ 1.35
CLIC6-201ENST00000349499 CARMIL1Q5VZK9 1371 aa23.49■■□□□ 1.35
CLIC6-201ENST00000349499 LAS1LQ9Y4W2 734 aaKnown RBP23.48■■□□□ 1.35
CLIC6-201ENST00000349499 PRXQ9BXM0 1461 aa23.47■■□□□ 1.35
CLIC6-201ENST00000349499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.46■■□□□ 1.35
CLIC6-201ENST00000349499 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.46■■□□□ 1.35
CLIC6-201ENST00000349499 RGL3Q3MIN7 710 aa23.44■■□□□ 1.34
CLIC6-201ENST00000349499 WASHC2AQ641Q2 1341 aa23.42■■□□□ 1.34
CLIC6-201ENST00000349499 ARXQ96QS3 562 aa23.42■■□□□ 1.34
CLIC6-201ENST00000349499 IL27Q8NEV9 243 aa23.41■■□□□ 1.34
CLIC6-201ENST00000349499 EIF5BO60841 1220 aaKnown RBP23.38■■□□□ 1.33
CLIC6-201ENST00000349499 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
CLIC6-201ENST00000349499 CADPSQ9ULU8 1353 aa23.37■■□□□ 1.33
CLIC6-201ENST00000349499 FHOD3Q2V2M9 1422 aa23.35■■□□□ 1.33
CLIC6-201ENST00000349499 TDRD9Q8NDG6 1382 aaKnown RBP23.35■■□□□ 1.33
CLIC6-201ENST00000349499 IPO9Q96P70 1041 aaKnown RBP23.33■■□□□ 1.33
CLIC6-201ENST00000349499 L3MBTL2Q969R5 705 aa23.32■■□□□ 1.32
CLIC6-201ENST00000349499 PRKRIP1Q9H875 184 aaPredicted RBP23.32■■□□□ 1.32
CLIC6-201ENST00000349499 ERICH6BQ5W0A0 696 aa23.32■■□□□ 1.32
CLIC6-201ENST00000349499 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
CLIC6-201ENST00000349499 LRRC9Q6ZRR7 1453 aa23.31■■□□□ 1.32
CLIC6-201ENST00000349499 NEFMP07197 916 aa23.31■■□□□ 1.32
CLIC6-201ENST00000349499 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
CLIC6-201ENST00000349499 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
CLIC6-201ENST00000349499 C11orf95C9JLR9 678 aaPredicted RBP23.27■■□□□ 1.32
CLIC6-201ENST00000349499 NESP48681 1621 aa23.26■■□□□ 1.31
CLIC6-201ENST00000349499 AKNAQ7Z591 1439 aa23.25■■□□□ 1.31
CLIC6-201ENST00000349499 CANXP27824 592 aaKnown RBP23.24■■□□□ 1.31
CLIC6-201ENST00000349499 CARD11Q9BXL7 1154 aa23.22■■□□□ 1.31
CLIC6-201ENST00000349499 ZBED9Q6R2W3 1325 aa23.22■■□□□ 1.31
CLIC6-201ENST00000349499 CCDC18Q5T9S5 1454 aa23.21■■□□□ 1.31
CLIC6-201ENST00000349499 TIAM1Q13009 1591 aa23.21■■□□□ 1.31
CLIC6-201ENST00000349499 MPHOSPH9Q99550 1183 aa23.2■■□□□ 1.31
CLIC6-201ENST00000349499 CC2D1BQ5T0F9 858 aaKnown RBP23.19■■□□□ 1.3
CLIC6-201ENST00000349499 IGF1RP08069 1367 aa23.18■■□□□ 1.3
CLIC6-201ENST00000349499 FHAD1B1AJZ9 1412 aa23.17■■□□□ 1.3
CLIC6-201ENST00000349499 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
CLIC6-201ENST00000349499 CC2D2AQ9P2K1 1620 aa23.15■■□□□ 1.3
CLIC6-201ENST00000349499 CFDP1Q9UEE9 299 aaPredicted RBP23.15■■□□□ 1.3
CLIC6-201ENST00000349499 CUX1P39880 1505 aa23.14■■□□□ 1.29
CLIC6-201ENST00000349499 FANCD2Q9BXW9 1451 aa23.13■■□□□ 1.29
CLIC6-201ENST00000349499 NUDCQ9Y266 331 aa23.12■■□□□ 1.29
CLIC6-201ENST00000349499 RGS3P49796 1198 aa23.12■■□□□ 1.29
CLIC6-201ENST00000349499 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
CLIC6-201ENST00000349499 TSPY4P0CV99 314 aa23.11■■□□□ 1.29
CLIC6-201ENST00000349499 TSPY10P0CW01 314 aa23.11■■□□□ 1.29
CLIC6-201ENST00000349499 DCAF11Q8TEB1 546 aa23.11■■□□□ 1.29
CLIC6-201ENST00000349499 ERCC6Q03468 1493 aa23.08■■□□□ 1.29
CLIC6-201ENST00000349499 CNTLNQ9NXG0 1405 aa23.08■■□□□ 1.28
CLIC6-201ENST00000349499 CHGAP10645 457 aaKnown RBP23.07■■□□□ 1.28
CLIC6-201ENST00000349499 SLC4A3P48751 1232 aa23.07■■□□□ 1.28
CLIC6-201ENST00000349499 UACAQ9BZF9 1416 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms