RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ZCCHC6Q5VYS8 1495 aaKnown RBP14.8□□□□□ -0.04
SMARCE1-202ENST00000348513 AMER1Q5JTC6 1135 aaPredicted RBP14.8□□□□□ -0.04
SMARCE1-202ENST00000348513 NOP58Q9Y2X3 529 aaKnown RBP14.8□□□□□ -0.04
SMARCE1-202ENST00000348513 ANO8Q9HCE9 1232 aaPredicted RBP14.8□□□□□ -0.04
SMARCE1-202ENST00000348513 HNRNPUQ00839 825 aaKnown RBP eCLIP14.79□□□□□ -0.04
SMARCE1-202ENST00000348513 PLEKHG5O94827 1062 aa14.78□□□□□ -0.04
SMARCE1-202ENST00000348513 HIRIP3Q9BW71 556 aaPredicted RBP14.76□□□□□ -0.05
SMARCE1-202ENST00000348513 PPM1GO15355 546 aaPredicted RBP14.75□□□□□ -0.05
SMARCE1-202ENST00000348513 KCNH8Q96L42 1107 aa14.74□□□□□ -0.05
SMARCE1-202ENST00000348513 SUPT16HQ9Y5B9 1047 aaKnown RBP14.74□□□□□ -0.05
SMARCE1-202ENST00000348513 TSPY4P0CV99 314 aa14.74□□□□□ -0.05
SMARCE1-202ENST00000348513 TSPY10P0CW01 314 aa14.74□□□□□ -0.05
SMARCE1-202ENST00000348513 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
SMARCE1-202ENST00000348513 UBE2Q2Q8WVN8 375 aa14.73□□□□□ -0.05
SMARCE1-202ENST00000348513 HSP90AA2PQ14568 343 aaPredicted RBP14.71□□□□□ -0.05
SMARCE1-202ENST00000348513 RRP7BPQ9NSQ0 103 aa14.7□□□□□ -0.06
SMARCE1-202ENST00000348513 DDRGK1Q96HY6 314 aa14.7□□□□□ -0.06
SMARCE1-202ENST00000348513 ARXQ96QS3 562 aa14.7□□□□□ -0.06
SMARCE1-202ENST00000348513 ZBTB7CA1YPR0 619 aa14.69□□□□□ -0.06
SMARCE1-202ENST00000348513 A0A0G2JS52 829 aa14.69□□□□□ -0.06
SMARCE1-202ENST00000348513 TMC1Q8TDI8 760 aa14.69□□□□□ -0.06
SMARCE1-202ENST00000348513 RBM19Q9Y4C8 960 aaKnown RBP14.67□□□□□ -0.06
SMARCE1-202ENST00000348513 TSHZ2Q9NRE2 1034 aa14.67□□□□□ -0.06
SMARCE1-202ENST00000348513 DCAF1Q9Y4B6 1507 aa14.65□□□□□ -0.06
SMARCE1-202ENST00000348513 WDR43Q15061 677 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMARCE1-202ENST00000348513 CLIP1P30622 1438 aa14.62□□□□□ -0.07
SMARCE1-202ENST00000348513 C14orf37Q86TY3 774 aa14.62□□□□□ -0.07
SMARCE1-202ENST00000348513 MRS2Q9HD23 443 aa14.62□□□□□ -0.07
SMARCE1-202ENST00000348513 PDE4CQ08493 712 aa14.61□□□□□ -0.07
SMARCE1-202ENST00000348513 SENP3-EIF4A1A0A087X0R7 540 aa14.61□□□□□ -0.07
SMARCE1-202ENST00000348513 IRX6P78412 446 aaPredicted RBP14.61□□□□□ -0.07
SMARCE1-202ENST00000348513 RGL3Q3MIN7 710 aa14.6□□□□□ -0.07
SMARCE1-202ENST00000348513 PPP1R15AO75807 674 aaPredicted RBP14.59□□□□□ -0.07
SMARCE1-202ENST00000348513 MIER1Q8N108 512 aa14.59□□□□□ -0.07
SMARCE1-202ENST00000348513 PTMSP20962 102 aa14.58□□□□□ -0.08
SMARCE1-202ENST00000348513 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
SMARCE1-202ENST00000348513 UPF2Q9HAU5 1272 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-202ENST00000348513 ARID4BQ4LE39 1312 aaPredicted RBP14.55□□□□□ -0.08
SMARCE1-202ENST00000348513 PLEKHD1A6NEE1 506 aa14.55□□□□□ -0.08
SMARCE1-202ENST00000348513 CCDC180Q9P1Z9 1646 aa14.55□□□□□ -0.08
SMARCE1-202ENST00000348513 L1TD1Q5T7N2 865 aaKnown RBP14.55□□□□□ -0.08
SMARCE1-202ENST00000348513 LAS1LQ9Y4W2 734 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-202ENST00000348513 TIMELESSQ9UNS1 1208 aa14.52□□□□□ -0.08
SMARCE1-202ENST00000348513 PNNQ9H307 717 aaKnown RBP14.52□□□□□ -0.08
SMARCE1-202ENST00000348513 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.52□□□□□ -0.09
SMARCE1-202ENST00000348513 EIF4G2P78344 907 aaKnown RBP eCLIP14.5□□□□□ -0.09
SMARCE1-202ENST00000348513 TNNT3P45378 269 aaPredicted RBP14.48□□□□□ -0.09
SMARCE1-202ENST00000348513 MYO15BQ96JP2 1530 aa14.48□□□□□ -0.09
SMARCE1-202ENST00000348513 BAZ1BQ9UIG0 1483 aaKnown RBP14.48□□□□□ -0.09
SMARCE1-202ENST00000348513 RSF1Q96T23 1441 aaPredicted RBP14.47□□□□□ -0.09
SMARCE1-202ENST00000348513 CEP162Q5TB80 1403 aa14.47□□□□□ -0.09
SMARCE1-202ENST00000348513 CFDP1Q9UEE9 299 aaPredicted RBP14.47□□□□□ -0.09
SMARCE1-202ENST00000348513 APPP05067 770 aa14.46□□□□□ -0.09
SMARCE1-202ENST00000348513 GOLGA3Q08378 1498 aa14.46□□□□□ -0.09
SMARCE1-202ENST00000348513 WRNQ14191 1432 aaPredicted RBP eCLIP14.45□□□□□ -0.1
SMARCE1-202ENST00000348513 ERCC6Q03468 1493 aa14.43□□□□□ -0.1
SMARCE1-202ENST00000348513 HAP1P54257 671 aaPredicted RBP14.43□□□□□ -0.1
SMARCE1-202ENST00000348513 DNTTIP2Q5QJE6 756 aaKnown RBP14.43□□□□□ -0.1
SMARCE1-202ENST00000348513 MYH16Q9H6N6 1097 aa14.42□□□□□ -0.1
SMARCE1-202ENST00000348513 BECN1Q14457 450 aa14.4□□□□□ -0.1
SMARCE1-202ENST00000348513 KIF27Q86VH2 1401 aa14.38□□□□□ -0.11
SMARCE1-202ENST00000348513 LMOD2Q6P5Q4 547 aa14.38□□□□□ -0.11
SMARCE1-202ENST00000348513 CARD11Q9BXL7 1154 aa14.37□□□□□ -0.11
SMARCE1-202ENST00000348513 NEUROD2Q15784 382 aa14.37□□□□□ -0.11
SMARCE1-202ENST00000348513 MSNP26038 577 aaKnown RBP14.37□□□□□ -0.11
SMARCE1-202ENST00000348513 SIN3AQ96ST3 1273 aa14.36□□□□□ -0.11
SMARCE1-202ENST00000348513 KNSTRNQ9Y448 316 aa14.35□□□□□ -0.11
SMARCE1-202ENST00000348513 EIF4G1Q04637 1599 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-202ENST00000348513 PTMAP06454 111 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-202ENST00000348513 EEA1Q15075 1411 aa14.32□□□□□ -0.12
SMARCE1-202ENST00000348513 MLECQ14165 292 aa14.32□□□□□ -0.12
SMARCE1-202ENST00000348513 CFAP53Q96M91 514 aa14.32□□□□□ -0.12
SMARCE1-202ENST00000348513 PPP4R2Q9NY27 417 aa14.32□□□□□ -0.12
SMARCE1-202ENST00000348513 POGKQ9P215 609 aa14.32□□□□□ -0.12
SMARCE1-202ENST00000348513 PDIA4P13667 645 aaKnown RBP14.32□□□□□ -0.12
SMARCE1-202ENST00000348513 ARID3AQ99856 593 aa14.31□□□□□ -0.12
SMARCE1-202ENST00000348513 NACADO15069 1562 aa14.31□□□□□ -0.12
SMARCE1-202ENST00000348513 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-202ENST00000348513 USP35Q9P2H5 1018 aa14.29□□□□□ -0.12
SMARCE1-202ENST00000348513 CALRP27797 417 aaKnown RBP14.29□□□□□ -0.12
SMARCE1-202ENST00000348513 CC2D1BQ5T0F9 858 aaKnown RBP14.29□□□□□ -0.12
SMARCE1-202ENST00000348513 CEP164Q9UPV0 1460 aa14.29□□□□□ -0.12
SMARCE1-202ENST00000348513 FANCIQ9NVI1 1328 aa14.27□□□□□ -0.13
SMARCE1-202ENST00000348513 TPRNQ4KMQ1 711 aa14.26□□□□□ -0.13
SMARCE1-202ENST00000348513 TNIKQ9UKE5 1360 aa14.26□□□□□ -0.13
SMARCE1-202ENST00000348513 CDCA8Q53HL2 280 aa14.26□□□□□ -0.13
SMARCE1-202ENST00000348513 GOLGA6L22H0YM25 854 aa14.26□□□□□ -0.13
SMARCE1-202ENST00000348513 SOX12O15370 315 aa14.25□□□□□ -0.13
SMARCE1-202ENST00000348513 CCNB3Q8WWL7 1395 aa14.25□□□□□ -0.13
SMARCE1-202ENST00000348513 FTSJ3Q8IY81 847 aaKnown RBP14.24□□□□□ -0.13
SMARCE1-202ENST00000348513 CECR2Q9BXF3 1484 aa14.24□□□□□ -0.13
SMARCE1-202ENST00000348513 CHAF1AQ13111 956 aaPredicted RBP14.24□□□□□ -0.13
SMARCE1-202ENST00000348513 MAPK8IP3Q9UPT6 1336 aa14.24□□□□□ -0.13
SMARCE1-202ENST00000348513 SAFB2Q14151 953 aaKnown RBP eCLIP14.23□□□□□ -0.13
SMARCE1-202ENST00000348513 TAF7LQ5H9L4 462 aa14.23□□□□□ -0.13
SMARCE1-202ENST00000348513 U2SURPO15042 1029 aaKnown RBP14.22□□□□□ -0.13
SMARCE1-202ENST00000348513 DCAF11Q8TEB1 546 aa14.22□□□□□ -0.13
SMARCE1-202ENST00000348513 FRAT1Q92837 279 aaPredicted RBP14.21□□□□□ -0.13
SMARCE1-202ENST00000348513 IPO9Q96P70 1041 aaKnown RBP14.21□□□□□ -0.13
SMARCE1-202ENST00000348513 CUX2O14529 1486 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms