RNA–Protein interactions for RNA: ENST00000346991.9

KNL1-201, Transcript of kinetochore scaffold 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KNL1, Length 9,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-201ENST00000346991 TMC1Q8TDI8 760 aa9.52□□□□□ -0.88
KNL1-201ENST00000346991 PPP1R15AO75807 674 aaPredicted RBP9.52□□□□□ -0.89
KNL1-201ENST00000346991 CHMP4BQ9H444 224 aaKnown RBP9.49□□□□□ -0.89
KNL1-201ENST00000346991 FGD1P98174 961 aa9.49□□□□□ -0.89
KNL1-201ENST00000346991 NOC3LQ8WTT2 800 aaKnown RBP9.49□□□□□ -0.89
KNL1-201ENST00000346991 PNNQ9H307 717 aaKnown RBP9.46□□□□□ -0.89
KNL1-201ENST00000346991 USP35Q9P2H5 1018 aa9.46□□□□□ -0.9
KNL1-201ENST00000346991 TMX4Q9H1E5 349 aaPredicted RBP9.46□□□□□ -0.9
KNL1-201ENST00000346991 CFAP53Q96M91 514 aa9.46□□□□□ -0.9
KNL1-201ENST00000346991 ACIN1Q9UKV3 1341 aaKnown RBP9.45□□□□□ -0.9
KNL1-201ENST00000346991 NBR1Q14596 966 aa9.45□□□□□ -0.9
KNL1-201ENST00000346991 HNRNPUQ00839 825 aaKnown RBP eCLIP9.45□□□□□ -0.9
KNL1-201ENST00000346991 LOC105371045A0A1W2PR82 267 aa9.43□□□□□ -0.9
KNL1-201ENST00000346991 FTSJ3Q8IY81 847 aaKnown RBP9.43□□□□□ -0.9
KNL1-201ENST00000346991 ARID3CA6NKF2 412 aa9.43□□□□□ -0.9
KNL1-201ENST00000346991 FAM9BQ8IZU0 186 aa9.42□□□□□ -0.9
KNL1-201ENST00000346991 KCNJ4P48050 445 aa9.42□□□□□ -0.9
KNL1-201ENST00000346991 GOLGA6L4A6NEF3 574 aa9.42□□□□□ -0.9
KNL1-201ENST00000346991 OS9Q13438 667 aaPredicted RBP9.42□□□□□ -0.9
KNL1-201ENST00000346991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.41□□□□□ -0.94e-7■■□□□ 14.2
KNL1-201ENST00000346991 ERICH6BQ5W0A0 696 aa9.41□□□□□ -0.9
KNL1-201ENST00000346991 FKBP8Q14318 412 aa9.41□□□□□ -0.9
KNL1-201ENST00000346991 ISY1Q9ULR0 285 aaKnown RBP9.41□□□□□ -0.9
KNL1-201ENST00000346991 CDCA8Q53HL2 280 aa9.4□□□□□ -0.9
KNL1-201ENST00000346991 GNL2Q13823 731 aaKnown RBP9.4□□□□□ -0.9
KNL1-201ENST00000346991 PLEKHG5O94827 1062 aa9.39□□□□□ -0.91
KNL1-201ENST00000346991 NAP1L2Q9ULW6 460 aaPredicted RBP9.39□□□□□ -0.91
KNL1-201ENST00000346991 CFAP44Q96MT7 982 aa9.39□□□□□ -0.91
KNL1-201ENST00000346991 SALL2Q9Y467 1007 aaPredicted RBP9.39□□□□□ -0.91
KNL1-201ENST00000346991 ARID4BQ4LE39 1312 aaPredicted RBP9.39□□□□□ -0.91
KNL1-201ENST00000346991 TSPY4P0CV99 314 aa9.39□□□□□ -0.91
KNL1-201ENST00000346991 TSPY10P0CW01 314 aa9.39□□□□□ -0.91
KNL1-201ENST00000346991 A0A0U1RQG5 324 aaPredicted RBP9.37□□□□□ -0.91
KNL1-201ENST00000346991 CCDC34Q96HJ3 373 aa9.37□□□□□ -0.91
KNL1-201ENST00000346991 MS4A1P11836 297 aa9.37□□□□□ -0.91
KNL1-201ENST00000346991 MCCP23508 829 aa9.37□□□□□ -0.91
KNL1-201ENST00000346991 PLCB2Q00722 1185 aa9.36□□□□□ -0.91
KNL1-201ENST00000346991 P3H3Q8IVL6 736 aa9.36□□□□□ -0.91
KNL1-201ENST00000346991 DRC7Q8IY82 874 aa9.35□□□□□ -0.91
KNL1-201ENST00000346991 MAPK8IP3Q9UPT6 1336 aa9.35□□□□□ -0.91
KNL1-201ENST00000346991 GOLGA6L1Q8N7Z2 621 aa9.35□□□□□ -0.91
KNL1-201ENST00000346991 CEP89Q96ST8 783 aa9.34□□□□□ -0.91
KNL1-201ENST00000346991 TAOK2Q9UL54 1235 aa9.34□□□□□ -0.91
KNL1-201ENST00000346991 TPRNQ4KMQ1 711 aa9.34□□□□□ -0.91
KNL1-201ENST00000346991 NAP1L5Q96NT1 182 aaPredicted RBP9.34□□□□□ -0.91
KNL1-201ENST00000346991 HSP90AB1P08238 724 aaKnown RBP9.33□□□□□ -0.92
KNL1-201ENST00000346991 NUDCQ9Y266 331 aa9.33□□□□□ -0.92
KNL1-201ENST00000346991 MRS2Q9HD23 443 aa9.32□□□□□ -0.92
KNL1-201ENST00000346991 HTATSF1O43719 755 aaKnown RBP9.32□□□□□ -0.92
KNL1-201ENST00000346991 LMOD2Q6P5Q4 547 aa9.32□□□□□ -0.92
KNL1-201ENST00000346991 TPM4P67936 248 aa9.31□□□□□ -0.92
KNL1-201ENST00000346991 MSNP26038 577 aaKnown RBP9.31□□□□□ -0.92
KNL1-201ENST00000346991 PTMSP20962 102 aa9.3□□□□□ -0.92
KNL1-201ENST00000346991 PABPN1Q86U42 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
KNL1-201ENST00000346991 KNSTRNQ9Y448 316 aa9.3□□□□□ -0.92
KNL1-201ENST00000346991 KDM2AQ9Y2K7 1162 aa9.29□□□□□ -0.92
KNL1-201ENST00000346991 PPM1GO15355 546 aaPredicted RBP9.29□□□□□ -0.92
KNL1-201ENST00000346991 HDGFP51858 240 aaKnown RBP9.28□□□□□ -0.92
KNL1-201ENST00000346991 SETQ01105 290 aaPredicted RBP9.27□□□□□ -0.92
KNL1-201ENST00000346991 ABCC9O60706 1549 aa9.27□□□□□ -0.93
KNL1-201ENST00000346991 CHMP4AQ9BY43 222 aa9.27□□□□□ -0.93
KNL1-201ENST00000346991 G3V3G9 751 aa9.27□□□□□ -0.93
KNL1-201ENST00000346991 DCAF8Q5TAQ9 597 aa9.27□□□□□ -0.93
KNL1-201ENST00000346991 CALRP27797 417 aaKnown RBP9.27□□□□□ -0.93
KNL1-201ENST00000346991 LAS1LQ9Y4W2 734 aaKnown RBP9.26□□□□□ -0.93
KNL1-201ENST00000346991 KIAA1211Q6ZU35 1233 aa9.26□□□□□ -0.93
KNL1-201ENST00000346991 TNNT3P45378 269 aaPredicted RBP9.26□□□□□ -0.93
KNL1-201ENST00000346991 CNKSR2Q8WXI2 1034 aa9.26□□□□□ -0.93
KNL1-201ENST00000346991 HSCBQ8IWL3 235 aa9.26□□□□□ -0.93
KNL1-201ENST00000346991 POGKQ9P215 609 aa9.25□□□□□ -0.93
KNL1-201ENST00000346991 MTUS2Q5JR59 1369 aa9.24□□□□□ -0.93
KNL1-201ENST00000346991 DDX10Q13206 875 aaKnown RBP9.23□□□□□ -0.93
KNL1-201ENST00000346991 SYAP1Q96A49 352 aaPredicted RBP9.23□□□□□ -0.93
KNL1-201ENST00000346991 GPATCH3Q96I76 525 aa9.23□□□□□ -0.93
KNL1-201ENST00000346991 CHMP7Q8WUX9 453 aaPredicted RBP9.23□□□□□ -0.93
KNL1-201ENST00000346991 TCEAL9Q9UHQ7 104 aa9.22□□□□□ -0.93
KNL1-201ENST00000346991 TPM3P06753 285 aa9.21□□□□□ -0.94
KNL1-201ENST00000346991 RSF1Q96T23 1441 aaPredicted RBP9.21□□□□□ -0.94
KNL1-201ENST00000346991 CSPP1Q1MSJ5 1256 aa9.21□□□□□ -0.94
KNL1-201ENST00000346991 HDAC5Q9UQL6 1122 aa9.21□□□□□ -0.94
KNL1-201ENST00000346991 RASSF8Q8NHQ8 419 aa9.2□□□□□ -0.94
KNL1-201ENST00000346991 ANO8Q9HCE9 1232 aaPredicted RBP9.2□□□□□ -0.94
KNL1-201ENST00000346991 RTF1Q92541 710 aaKnown RBP9.19□□□□□ -0.94
KNL1-201ENST00000346991 DCAF8L1A6NGE4 600 aa9.19□□□□□ -0.94
KNL1-201ENST00000346991 CCDC70Q6NSX1 233 aa9.19□□□□□ -0.94
KNL1-201ENST00000346991 KANK1Q14678 1352 aa9.19□□□□□ -0.94
KNL1-201ENST00000346991 TSR1Q2NL82 804 aaKnown RBP9.18□□□□□ -0.94
KNL1-201ENST00000346991 VPS53Q5VIR6 699 aa9.18□□□□□ -0.94
KNL1-201ENST00000346991 TPM2P07951 284 aa9.18□□□□□ -0.94
KNL1-201ENST00000346991 CHIC2Q9UKJ5 165 aa9.17□□□□□ -0.94
KNL1-201ENST00000346991 CALD1Q05682 793 aaKnown RBP9.17□□□□□ -0.94
KNL1-201ENST00000346991 RRP12Q5JTH9 1297 aaKnown RBP9.17□□□□□ -0.94
KNL1-201ENST00000346991 PDE4CQ08493 712 aa9.17□□□□□ -0.94
KNL1-201ENST00000346991 GORABQ5T7V8 394 aa9.17□□□□□ -0.94
KNL1-201ENST00000346991 MARCH6O60337 910 aa9.16□□□□□ -0.94
KNL1-201ENST00000346991 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.16□□□□□ -0.94
KNL1-201ENST00000346991 CSRNP3Q8WYN3 585 aa9.16□□□□□ -0.94
KNL1-201ENST00000346991 KIF3AQ9Y496 699 aa9.16□□□□□ -0.94
KNL1-201ENST00000346991 TAF7LQ5H9L4 462 aa9.15□□□□□ -0.94
KNL1-201ENST00000346991 CHMP4CQ96CF2 233 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms