RNA–Protein interactions for RNA: ENST00000346991.9

KNL1-201, Transcript of kinetochore scaffold 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KNL1, Length 9,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-201ENST00000346991 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
KNL1-201ENST00000346991 DCAF8L2P0C7V8 631 aa12.01□□□□□ -0.49
KNL1-201ENST00000346991 FAM9AQ8IZU1 332 aaPredicted RBP11.64□□□□□ -0.55
KNL1-201ENST00000346991 CCER1Q8TC90 406 aaPredicted RBP11.47□□□□□ -0.57
KNL1-201ENST00000346991 APLP2Q06481 763 aa11.41□□□□□ -0.58
KNL1-201ENST00000346991 ERICH6Q7L0X2 663 aa11.41□□□□□ -0.58
KNL1-201ENST00000346991 SUPT5HO00267 1087 aaKnown RBP11.12□□□□□ -0.63
KNL1-201ENST00000346991 YTHDC1Q96MU7 727 aaKnown RBP11.07□□□□□ -0.64
KNL1-201ENST00000346991 CENPBP07199 599 aaPredicted RBP11□□□□□ -0.65
KNL1-201ENST00000346991 NEFLP07196 543 aa11□□□□□ -0.65
KNL1-201ENST00000346991 MYT1Q01538 1121 aa10.98□□□□□ -0.65
KNL1-201ENST00000346991 EHMT2Q96KQ7 1210 aa10.98□□□□□ -0.65
KNL1-201ENST00000346991 DAXXQ9UER7 740 aaPredicted RBP10.97□□□□□ -0.65
KNL1-201ENST00000346991 ATP1B4Q9UN42 357 aaPredicted RBP10.8□□□□□ -0.68
KNL1-201ENST00000346991 ZEB1P37275 1124 aaPredicted RBP10.78□□□□□ -0.68
KNL1-201ENST00000346991 SHROOM4Q9ULL8 1493 aa10.73□□□□□ -0.69
KNL1-201ENST00000346991 MYT1LQ9UL68 1186 aa10.69□□□□□ -0.7
KNL1-201ENST00000346991 TTBK1Q5TCY1 1321 aaPredicted RBP10.68□□□□□ -0.7
KNL1-201ENST00000346991 PCGF6Q9BYE7 350 aa10.67□□□□□ -0.7
KNL1-201ENST00000346991 NISCHQ9Y2I1 1504 aa10.63□□□□□ -0.71
KNL1-201ENST00000346991 ZNF316A6NFI3 1004 aaPredicted RBP10.62□□□□□ -0.71
KNL1-201ENST00000346991 RANGAP1P46060 587 aaPredicted RBP10.61□□□□□ -0.71
KNL1-201ENST00000346991 CLSPNQ9HAW4 1339 aa10.52□□□□□ -0.73
KNL1-201ENST00000346991 RTL5Q5HYW3 569 aaPredicted RBP10.52□□□□□ -0.73
KNL1-201ENST00000346991 UBTFP17480 764 aaKnown RBP10.51□□□□□ -0.73
KNL1-201ENST00000346991 SLC4A1APQ9BWU0 796 aaKnown RBP10.51□□□□□ -0.73
KNL1-201ENST00000346991 ZBTB47Q9UFB7 747 aaPredicted RBP10.48□□□□□ -0.73
KNL1-201ENST00000346991 POLR3GLQ9BT43 218 aa10.46□□□□□ -0.73
KNL1-201ENST00000346991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.43□□□□□ -0.74
KNL1-201ENST00000346991 HNRNPUL2Q1KMD3 747 aaKnown RBP10.43□□□□□ -0.74
KNL1-201ENST00000346991 TRIM41Q8WV44 630 aa10.41□□□□□ -0.74
KNL1-201ENST00000346991 CHIC1Q5VXU3 224 aa10.39□□□□□ -0.75
KNL1-201ENST00000346991 NEFMP07197 916 aa10.35□□□□□ -0.75
KNL1-201ENST00000346991 SLC24A1O60721 1099 aa10.26□□□□□ -0.77
KNL1-201ENST00000346991 ANP32BQ92688 251 aaKnown RBP10.21□□□□□ -0.77
KNL1-201ENST00000346991 CDK11BP21127 795 aaKnown RBP10.2□□□□□ -0.78
KNL1-201ENST00000346991 CDK11AQ9UQ88 783 aaPredicted RBP10.2□□□□□ -0.78
KNL1-201ENST00000346991 CANXP27824 592 aaKnown RBP10.18□□□□□ -0.78
KNL1-201ENST00000346991 CNGB1Q14028 1251 aaPredicted RBP10.17□□□□□ -0.78
KNL1-201ENST00000346991 ITGAEP38570 1179 aa10.16□□□□□ -0.78
KNL1-201ENST00000346991 BCANQ96GW7 911 aa10.13□□□□□ -0.79
KNL1-201ENST00000346991 GLIPR1L2Q4G1C9 344 aa10.07□□□□□ -0.8
KNL1-201ENST00000346991 HSP90AA1P07900 732 aaKnown RBP10.05□□□□□ -0.8
KNL1-201ENST00000346991 TRIM26Q12899 539 aaPredicted RBP10.03□□□□□ -0.8
KNL1-201ENST00000346991 ESF1Q9H501 851 aaKnown RBP10.02□□□□□ -0.8
KNL1-201ENST00000346991 BCL11AQ9H165 835 aa10.02□□□□□ -0.81
KNL1-201ENST00000346991 TRIM52Q96A61 297 aa9.99□□□□□ -0.81
KNL1-201ENST00000346991 UPF2Q9HAU5 1272 aaKnown RBP9.99□□□□□ -0.81
KNL1-201ENST00000346991 ANP32AP39687 249 aaKnown RBP9.99□□□□□ -0.81
KNL1-201ENST00000346991 ANP32CO43423 234 aa9.95□□□□□ -0.82
KNL1-201ENST00000346991 FAM50AQ14320 339 aaKnown RBP9.95□□□□□ -0.82
KNL1-201ENST00000346991 PPARGC1BQ86YN6 1023 aaKnown RBP9.93□□□□□ -0.82
KNL1-201ENST00000346991 NPM2Q86SE8 214 aaKnown RBP9.9□□□□□ -0.82
KNL1-201ENST00000346991 ZNF326Q5BKZ1 582 aaKnown RBP9.9□□□□□ -0.82
KNL1-201ENST00000346991 HRCP23327 699 aa9.88□□□□□ -0.83
KNL1-201ENST00000346991 STAG3Q9UJ98 1225 aa9.87□□□□□ -0.83
KNL1-201ENST00000346991 EIF5BO60841 1220 aaKnown RBP9.83□□□□□ -0.84
KNL1-201ENST00000346991 DIEXFQ68CQ4 756 aaKnown RBP9.83□□□□□ -0.84
KNL1-201ENST00000346991 MYH16Q9H6N6 1097 aa9.81□□□□□ -0.84
KNL1-201ENST00000346991 TNNT2P45379 298 aaPredicted RBP9.8□□□□□ -0.84
KNL1-201ENST00000346991 NEUROD1Q13562 356 aa9.8□□□□□ -0.84
KNL1-201ENST00000346991 ZRSR1Q15695 479 aaKnown RBP9.79□□□□□ -0.84
KNL1-201ENST00000346991 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.78□□□□□ -0.84
KNL1-201ENST00000346991 A0A0G2JS52 829 aa9.77□□□□□ -0.85
KNL1-201ENST00000346991 NCLP19338 710 aaKnown RBP9.77□□□□□ -0.85
KNL1-201ENST00000346991 FBLN2P98095 1184 aa9.76□□□□□ -0.85
KNL1-201ENST00000346991 SCAF1Q9H7N4 1312 aaKnown RBP9.76□□□□□ -0.85
KNL1-201ENST00000346991 TRIM44Q96DX7 344 aaPredicted RBP9.75□□□□□ -0.85
KNL1-201ENST00000346991 ANP32EQ9BTT0 268 aa9.72□□□□□ -0.85
KNL1-201ENST00000346991 NPM1P06748 294 aaKnown RBP eCLIP9.71□□□□□ -0.86
KNL1-201ENST00000346991 GOLGA6L6A8MZA4 724 aa9.69□□□□□ -0.86
KNL1-201ENST00000346991 GOLGA6L22H0YM25 854 aa9.68□□□□□ -0.86
KNL1-201ENST00000346991 PLPPR3Q6T4P5 718 aa9.67□□□□□ -0.86
KNL1-201ENST00000346991 TULP1O00294 542 aaPredicted RBP9.66□□□□□ -0.86
KNL1-201ENST00000346991 L1TD1Q5T7N2 865 aaKnown RBP9.66□□□□□ -0.86
KNL1-201ENST00000346991 CASC1Q6TDU7 716 aa9.66□□□□□ -0.86
KNL1-201ENST00000346991 CHGAP10645 457 aaKnown RBP9.65□□□□□ -0.86
KNL1-201ENST00000346991 NPHP1O15259 732 aa9.65□□□□□ -0.86
KNL1-201ENST00000346991 HAP1P54257 671 aaPredicted RBP9.64□□□□□ -0.87
KNL1-201ENST00000346991 NRDCO43847 1150 aa9.64□□□□□ -0.87
KNL1-201ENST00000346991 BECN1Q14457 450 aa9.64□□□□□ -0.87
KNL1-201ENST00000346991 WDR43Q15061 677 aaKnown RBP eCLIP9.62□□□□□ -0.87
KNL1-201ENST00000346991 C14orf37Q86TY3 774 aa9.6□□□□□ -0.87
KNL1-201ENST00000346991 PTMAP06454 111 aaKnown RBP9.6□□□□□ -0.87
KNL1-201ENST00000346991 CLSTN1O94985 981 aa9.59□□□□□ -0.87
KNL1-201ENST00000346991 NCBP3Q53F19 620 aaKnown RBP9.59□□□□□ -0.87
KNL1-201ENST00000346991 ZNF777Q9ULD5 760 aaPredicted RBP9.59□□□□□ -0.87
KNL1-201ENST00000346991 DNTTIP2Q5QJE6 756 aaKnown RBP9.57□□□□□ -0.88
KNL1-201ENST00000346991 GOLGA2Q08379 1002 aa9.56□□□□□ -0.88
KNL1-201ENST00000346991 DDRGK1Q96HY6 314 aa9.56□□□□□ -0.88
KNL1-201ENST00000346991 KIAA2012Q0VF49 1180 aa9.56□□□□□ -0.88
KNL1-201ENST00000346991 ARXQ96QS3 562 aa9.55□□□□□ -0.88
KNL1-201ENST00000346991 TONSLQ96HA7 1378 aa9.55□□□□□ -0.88
KNL1-201ENST00000346991 PRM3Q9NNZ6 103 aa9.55□□□□□ -0.88
KNL1-201ENST00000346991 EIF4G2P78344 907 aaKnown RBP eCLIP9.55□□□□□ -0.88
KNL1-201ENST00000346991 ZBTB7CA1YPR0 619 aa9.54□□□□□ -0.88
KNL1-201ENST00000346991 CHAF1AQ13111 956 aaPredicted RBP9.54□□□□□ -0.88
KNL1-201ENST00000346991 CCDC136Q96JN2 1154 aa9.53□□□□□ -0.88
KNL1-201ENST00000346991 GTF3C3Q9Y5Q9 886 aa9.53□□□□□ -0.88
KNL1-201ENST00000346991 KRI1Q8N9T8 703 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms