RNA–Protein interactions for RNA: ENST00000346085.9

ARID1B-202, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARID1B, Length 10,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-202ENST00000346085 VSIG10Q8N0Z9 540 aa22.9■■□□□ 1.26
ARID1B-202ENST00000346085 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
ARID1B-202ENST00000346085 USP35Q9P2H5 1018 aa22.86■■□□□ 1.25
ARID1B-202ENST00000346085 GOLGA6L1Q8N7Z2 621 aa22.86■■□□□ 1.25
ARID1B-202ENST00000346085 LAS1LQ9Y4W2 734 aaKnown RBP22.86■■□□□ 1.25
ARID1B-202ENST00000346085 A0A0U1RQG5 324 aaPredicted RBP22.86■■□□□ 1.25
ARID1B-202ENST00000346085 CASC1Q6TDU7 716 aa22.79■■□□□ 1.24
ARID1B-202ENST00000346085 PKNOX2Q96KN3 472 aa22.78■■□□□ 1.24
ARID1B-202ENST00000346085 KIAA2012Q0VF49 1180 aa22.78■■□□□ 1.24
ARID1B-202ENST00000346085 ARID3AQ99856 593 aa22.75■■□□□ 1.23
ARID1B-202ENST00000346085 PLCB2Q00722 1185 aa22.74■■□□□ 1.23
ARID1B-202ENST00000346085 FAM9BQ8IZU0 186 aa22.72■■□□□ 1.23
ARID1B-202ENST00000346085 DRC7Q8IY82 874 aa22.68■■□□□ 1.22
ARID1B-202ENST00000346085 GOLGA6L3A6NEY3 463 aa22.67■■□□□ 1.22
ARID1B-202ENST00000346085 NOC3LQ8WTT2 800 aaKnown RBP22.64■■□□□ 1.22
ARID1B-202ENST00000346085 TMC1Q8TDI8 760 aa22.61■■□□□ 1.21
ARID1B-202ENST00000346085 IRX6P78412 446 aaPredicted RBP22.6■■□□□ 1.21
ARID1B-202ENST00000346085 GOLGA6L4A6NEF3 574 aa22.59■■□□□ 1.21
ARID1B-202ENST00000346085 HSP90AB1P08238 724 aaKnown RBP22.58■■□□□ 1.21
ARID1B-202ENST00000346085 CSRNP3Q8WYN3 585 aa22.58■■□□□ 1.2
ARID1B-202ENST00000346085 ZNF771Q7L3S4 317 aaPredicted RBP22.55■■□□□ 1.2
ARID1B-202ENST00000346085 NOM1Q5C9Z4 860 aaKnown RBP22.54■■□□□ 1.2
ARID1B-202ENST00000346085 TONSLQ96HA7 1378 aa22.53■■□□□ 1.2
ARID1B-202ENST00000346085 WDR43Q15061 677 aaKnown RBP eCLIP22.52■■□□□ 1.2
ARID1B-202ENST00000346085 PRKCSHP14314 528 aaPredicted RBP22.51■■□□□ 1.19
ARID1B-202ENST00000346085 HSCBQ8IWL3 235 aa22.5■■□□□ 1.19
ARID1B-202ENST00000346085 STK11IPQ8N1F8 1099 aa22.47■■□□□ 1.19
ARID1B-202ENST00000346085 PPP4R2Q9NY27 417 aa22.47■■□□□ 1.19
ARID1B-202ENST00000346085 TPRNQ4KMQ1 711 aa22.47■■□□□ 1.19
ARID1B-202ENST00000346085 DDX10Q13206 875 aaKnown RBP22.46■■□□□ 1.19
ARID1B-202ENST00000346085 MRS2Q9HD23 443 aa22.45■■□□□ 1.18
ARID1B-202ENST00000346085 GBP4Q96PP9 640 aa22.43■■□□□ 1.18
ARID1B-202ENST00000346085 SYAP1Q96A49 352 aaPredicted RBP22.42■■□□□ 1.18
ARID1B-202ENST00000346085 TEX35Q5T0J7 233 aa22.42■■□□□ 1.18
ARID1B-202ENST00000346085 HTATSF1O43719 755 aaKnown RBP22.41■■□□□ 1.18
ARID1B-202ENST00000346085 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
ARID1B-202ENST00000346085 SALL2Q9Y467 1007 aaPredicted RBP22.4■■□□□ 1.18
ARID1B-202ENST00000346085 GPS2Q13227 327 aa22.39■■□□□ 1.17
ARID1B-202ENST00000346085 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.17
ARID1B-202ENST00000346085 MIER1Q8N108 512 aa22.37■■□□□ 1.17
ARID1B-202ENST00000346085 RBM19Q9Y4C8 960 aaKnown RBP22.37■■□□□ 1.17
ARID1B-202ENST00000346085 SUPT16HQ9Y5B9 1047 aaKnown RBP22.37■■□□□ 1.17
ARID1B-202ENST00000346085 MTERF4Q7Z6M4 381 aaKnown RBP22.34■■□□□ 1.17
ARID1B-202ENST00000346085 RRP12Q5JTH9 1297 aaKnown RBP22.3■■□□□ 1.16
ARID1B-202ENST00000346085 MAP7D2Q96T17 732 aa22.27■■□□□ 1.16
ARID1B-202ENST00000346085 CCDC66A2RUB6 948 aa22.26■■□□□ 1.15
ARID1B-202ENST00000346085 PHF14O94880 888 aa22.26■■□□□ 1.15
ARID1B-202ENST00000346085 CWC15Q9P013 229 aaKnown RBP22.25■■□□□ 1.15
ARID1B-202ENST00000346085 FTSJ3Q8IY81 847 aaKnown RBP22.25■■□□□ 1.15
ARID1B-202ENST00000346085 CFAP44Q96MT7 982 aa22.25■■□□□ 1.15
ARID1B-202ENST00000346085 ZBTB7CA1YPR0 619 aa22.25■■□□□ 1.15
ARID1B-202ENST00000346085 TPM4P67936 248 aa22.24■■□□□ 1.15
ARID1B-202ENST00000346085 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
ARID1B-202ENST00000346085 NEFHP12036 1026 aa22.23■■□□□ 1.15
ARID1B-202ENST00000346085 CHMP4BQ9H444 224 aaKnown RBP22.2■■□□□ 1.14
ARID1B-202ENST00000346085 GZF1Q9H116 711 aaPredicted RBP22.19■■□□□ 1.14
ARID1B-202ENST00000346085 RDXP35241 583 aaKnown RBP22.19■■□□□ 1.14
ARID1B-202ENST00000346085 TULP1O00294 542 aaPredicted RBP22.17■■□□□ 1.14
ARID1B-202ENST00000346085 CALD1Q05682 793 aaKnown RBP22.17■■□□□ 1.14
ARID1B-202ENST00000346085 MEX3CQ5U5Q3 659 aaKnown RBP22.16■■□□□ 1.14
ARID1B-202ENST00000346085 MCCP23508 829 aa22.16■■□□□ 1.14
ARID1B-202ENST00000346085 TAF3Q5VWG9 929 aa22.16■■□□□ 1.14
ARID1B-202ENST00000346085 FGD1P98174 961 aa22.16■■□□□ 1.14
ARID1B-202ENST00000346085 RGS3P49796 1198 aa22.15■■□□□ 1.14
ARID1B-202ENST00000346085 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.15■■□□□ 1.14
ARID1B-202ENST00000346085 PATL2C9JE40 543 aaKnown RBP22.14■■□□□ 1.13
ARID1B-202ENST00000346085 HMMRO75330 724 aa22.13■■□□□ 1.13
ARID1B-202ENST00000346085 CSPP1Q1MSJ5 1256 aa22.13■■□□□ 1.13
ARID1B-202ENST00000346085 CCDC70Q6NSX1 233 aa22.12■■□□□ 1.13
ARID1B-202ENST00000346085 TAF7LQ5H9L4 462 aa22.12■■□□□ 1.13
ARID1B-202ENST00000346085 CCDC191Q8NCU4 936 aa22.11■■□□□ 1.13
ARID1B-202ENST00000346085 FAM13BQ9NYF5 915 aa22.09■■□□□ 1.13
ARID1B-202ENST00000346085 IPO9Q96P70 1041 aaKnown RBP22.08■■□□□ 1.13
ARID1B-202ENST00000346085 TPM3P06753 285 aa22.06■■□□□ 1.12
ARID1B-202ENST00000346085 MS4A1P11836 297 aa22.05■■□□□ 1.12
ARID1B-202ENST00000346085 DDX11L8A8MPP1 907 aa22.05■■□□□ 1.12
ARID1B-202ENST00000346085 HSP90B1P14625 803 aaKnown RBP22.04■■□□□ 1.12
ARID1B-202ENST00000346085 GSE1Q14687 1217 aa22.03■■□□□ 1.12
ARID1B-202ENST00000346085 KCNJ4P48050 445 aa22.03■■□□□ 1.12
ARID1B-202ENST00000346085 PDE4CQ08493 712 aa22.02■■□□□ 1.12
ARID1B-202ENST00000346085 CCDC34Q96HJ3 373 aa22■■□□□ 1.11
ARID1B-202ENST00000346085 SPRYD3Q8NCJ5 442 aa21.99■■□□□ 1.11
ARID1B-202ENST00000346085 B4GALNT3Q6L9W6 998 aa21.99■■□□□ 1.11
ARID1B-202ENST00000346085 GNL2Q13823 731 aaKnown RBP21.97■■□□□ 1.11
ARID1B-202ENST00000346085 H0YHG0 523 aa21.97■■□□□ 1.11
ARID1B-202ENST00000346085 CLSTN1O94985 981 aa21.96■■□□□ 1.11
ARID1B-202ENST00000346085 ACBD3Q9H3P7 528 aa21.96■■□□□ 1.11
ARID1B-202ENST00000346085 TPM2P07951 284 aa21.96■■□□□ 1.11
ARID1B-202ENST00000346085 AK7Q96M32 723 aa21.95■■□□□ 1.1
ARID1B-202ENST00000346085 DCTN1Q14203 1278 aa21.94■■□□□ 1.1
ARID1B-202ENST00000346085 ARGLU1Q9NWB6 273 aaPredicted RBP21.94■■□□□ 1.1
ARID1B-202ENST00000346085 NAP1L2Q9ULW6 460 aaPredicted RBP21.93■■□□□ 1.1
ARID1B-202ENST00000346085 DYDC1Q8WWB3 177 aa21.93■■□□□ 1.1
ARID1B-202ENST00000346085 FAM43AQ8N2R8 423 aa21.92■■□□□ 1.1
ARID1B-202ENST00000346085 SLKQ9H2G2 1235 aaPredicted RBP21.91■■□□□ 1.1
ARID1B-202ENST00000346085 TCERG1O14776 1098 aaKnown RBP21.9■■□□□ 1.1
ARID1B-202ENST00000346085 CDR1P51861 262 aa21.9■■□□□ 1.1
ARID1B-202ENST00000346085 SKOR2Q2VWA4 1001 aaPredicted RBP21.9■■□□□ 1.1
ARID1B-202ENST00000346085 DEF6Q9H4E7 631 aa21.89■■□□□ 1.09
ARID1B-202ENST00000346085 RRP9O43818 475 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms