RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 CHIC2Q9UKJ5 165 aa20.04■□□□□ 0.8
CUL3-202ENST00000344951 MYH16Q9H6N6 1097 aa20.03■□□□□ 0.8
CUL3-202ENST00000344951 TMC1Q8TDI8 760 aa20.01■□□□□ 0.79
CUL3-202ENST00000344951 NPM1P06748 294 aaKnown RBP eCLIP19.99■□□□□ 0.79
CUL3-202ENST00000344951 NPHP1O15259 732 aa19.98■□□□□ 0.79
CUL3-202ENST00000344951 HIRIP3Q9BW71 556 aaPredicted RBP19.98■□□□□ 0.79
CUL3-202ENST00000344951 AMER1Q5JTC6 1135 aaPredicted RBP19.97■□□□□ 0.79
CUL3-202ENST00000344951 CLSTN1O94985 981 aa19.95■□□□□ 0.78
CUL3-202ENST00000344951 MRS2Q9HD23 443 aa19.92■□□□□ 0.78
CUL3-202ENST00000344951 PPM1GO15355 546 aaPredicted RBP19.92■□□□□ 0.78
CUL3-202ENST00000344951 PTMAP06454 111 aaKnown RBP19.91■□□□□ 0.78
CUL3-202ENST00000344951 DNTTIP2Q5QJE6 756 aaKnown RBP19.9■□□□□ 0.78
CUL3-202ENST00000344951 TRIM44Q96DX7 344 aaPredicted RBP19.89■□□□□ 0.78
CUL3-202ENST00000344951 MYO15BQ96JP2 1530 aa19.89■□□□□ 0.78
CUL3-202ENST00000344951 ZRSR1Q15695 479 aaKnown RBP19.89■□□□□ 0.77
CUL3-202ENST00000344951 PLCB2Q00722 1185 aa19.89■□□□□ 0.77
CUL3-202ENST00000344951 ANP32EQ9BTT0 268 aa19.88■□□□□ 0.77
CUL3-202ENST00000344951 LMOD2Q6P5Q4 547 aa19.88■□□□□ 0.77
CUL3-202ENST00000344951 LAS1LQ9Y4W2 734 aaKnown RBP19.86■□□□□ 0.77
CUL3-202ENST00000344951 PPP1R15AO75807 674 aaPredicted RBP19.86■□□□□ 0.77
CUL3-202ENST00000344951 NAP1L2Q9ULW6 460 aaPredicted RBP19.84■□□□□ 0.77
CUL3-202ENST00000344951 RTN4Q9NQC3 1192 aaKnown RBP19.81■□□□□ 0.76
CUL3-202ENST00000344951 ARID4BQ4LE39 1312 aaPredicted RBP19.78■□□□□ 0.76
CUL3-202ENST00000344951 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
CUL3-202ENST00000344951 ISY1Q9ULR0 285 aaKnown RBP19.75■□□□□ 0.75
CUL3-202ENST00000344951 NEUROD2Q15784 382 aa19.73■□□□□ 0.75
CUL3-202ENST00000344951 DDRGK1Q96HY6 314 aa19.69■□□□□ 0.74
CUL3-202ENST00000344951 KCNH8Q96L42 1107 aa19.69■□□□□ 0.74
CUL3-202ENST00000344951 PRM3Q9NNZ6 103 aa19.69■□□□□ 0.74
CUL3-202ENST00000344951 SUPT16HQ9Y5B9 1047 aaKnown RBP19.69■□□□□ 0.74
CUL3-202ENST00000344951 GOLGA6L22H0YM25 854 aa19.68■□□□□ 0.74
CUL3-202ENST00000344951 TNNT2P45379 298 aaPredicted RBP19.68■□□□□ 0.74
CUL3-202ENST00000344951 BECN1Q14457 450 aa19.68■□□□□ 0.74
CUL3-202ENST00000344951 NAP1L5Q96NT1 182 aaPredicted RBP19.67■□□□□ 0.74
CUL3-202ENST00000344951 RGL3Q3MIN7 710 aa19.67■□□□□ 0.74
CUL3-202ENST00000344951 CCDC180Q9P1Z9 1646 aa19.66■□□□□ 0.74
CUL3-202ENST00000344951 ANO8Q9HCE9 1232 aaPredicted RBP19.66■□□□□ 0.74
CUL3-202ENST00000344951 PDE4CQ08493 712 aa19.65■□□□□ 0.74
CUL3-202ENST00000344951 FGD1P98174 961 aa19.64■□□□□ 0.73
CUL3-202ENST00000344951 OS9Q13438 667 aaPredicted RBP19.64■□□□□ 0.73
CUL3-202ENST00000344951 GOLGA2Q08379 1002 aa19.64■□□□□ 0.73
CUL3-202ENST00000344951 EIF4G2P78344 907 aaKnown RBP eCLIP19.63■□□□□ 0.73
CUL3-202ENST00000344951 CASC1Q6TDU7 716 aa19.62■□□□□ 0.73
CUL3-202ENST00000344951 SOX12O15370 315 aa19.61■□□□□ 0.73
CUL3-202ENST00000344951 ERICH6BQ5W0A0 696 aa19.61■□□□□ 0.73
CUL3-202ENST00000344951 FTSJ3Q8IY81 847 aaKnown RBP19.61■□□□□ 0.73
CUL3-202ENST00000344951 CLIP1P30622 1438 aa19.6■□□□□ 0.73
CUL3-202ENST00000344951 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
CUL3-202ENST00000344951 SPRYD3Q8NCJ5 442 aa19.56■□□□□ 0.72
CUL3-202ENST00000344951 RRP7BPQ9NSQ0 103 aa19.56■□□□□ 0.72
CUL3-202ENST00000344951 KCNJ4P48050 445 aa19.56■□□□□ 0.72
CUL3-202ENST00000344951 TSPY4P0CV99 314 aa19.54■□□□□ 0.72
CUL3-202ENST00000344951 TSPY10P0CW01 314 aa19.54■□□□□ 0.72
CUL3-202ENST00000344951 RGS3P49796 1198 aa19.54■□□□□ 0.72
CUL3-202ENST00000344951 FRAT1Q92837 279 aaPredicted RBP19.54■□□□□ 0.72
CUL3-202ENST00000344951 ARID3AQ99856 593 aa19.54■□□□□ 0.72
CUL3-202ENST00000344951 MTUS2Q5JR59 1369 aa19.53■□□□□ 0.72
CUL3-202ENST00000344951 CEP162Q5TB80 1403 aa19.53■□□□□ 0.72
CUL3-202ENST00000344951 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.52■□□□□ 0.72
CUL3-202ENST00000344951 NOP58Q9Y2X3 529 aaKnown RBP19.51■□□□□ 0.71
CUL3-202ENST00000344951 HSP90AB1P08238 724 aaKnown RBP19.48■□□□□ 0.71
CUL3-202ENST00000344951 PPP4R2Q9NY27 417 aa19.48■□□□□ 0.71
CUL3-202ENST00000344951 FBXO3Q9UK99 471 aa19.45■□□□□ 0.7
CUL3-202ENST00000344951 GOLGA6L6A8MZA4 724 aa19.45■□□□□ 0.7
CUL3-202ENST00000344951 DRC7Q8IY82 874 aa19.44■□□□□ 0.7
CUL3-202ENST00000344951 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
CUL3-202ENST00000344951 ZNF330Q9Y3S2 320 aaPredicted RBP19.43■□□□□ 0.7
CUL3-202ENST00000344951 B4GALNT3Q6L9W6 998 aa19.42■□□□□ 0.7
CUL3-202ENST00000344951 U2SURPO15042 1029 aaKnown RBP19.42■□□□□ 0.7
CUL3-202ENST00000344951 MAPK8IP3Q9UPT6 1336 aa19.41■□□□□ 0.7
CUL3-202ENST00000344951 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
CUL3-202ENST00000344951 APBB1O00213 710 aa19.4■□□□□ 0.7
CUL3-202ENST00000344951 SIN3AQ96ST3 1273 aa19.4■□□□□ 0.7
CUL3-202ENST00000344951 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.69
CUL3-202ENST00000344951 GOLGA6L4A6NEF3 574 aa19.39■□□□□ 0.69
CUL3-202ENST00000344951 CC2D1BQ5T0F9 858 aaKnown RBP19.39■□□□□ 0.69
CUL3-202ENST00000344951 POGKQ9P215 609 aa19.38■□□□□ 0.69
CUL3-202ENST00000344951 DEKP35659 375 aaKnown RBP19.38■□□□□ 0.69
CUL3-202ENST00000344951 KNSTRNQ9Y448 316 aa19.37■□□□□ 0.69
CUL3-202ENST00000344951 NOC3LQ8WTT2 800 aaKnown RBP19.36■□□□□ 0.69
CUL3-202ENST00000344951 GNL2Q13823 731 aaKnown RBP19.35■□□□□ 0.69
CUL3-202ENST00000344951 MLECQ14165 292 aa19.35■□□□□ 0.69
CUL3-202ENST00000344951 RBM19Q9Y4C8 960 aaKnown RBP19.34■□□□□ 0.69
CUL3-202ENST00000344951 TRHP20396 242 aaPredicted RBP19.34■□□□□ 0.69
CUL3-202ENST00000344951 PNNQ9H307 717 aaKnown RBP19.34■□□□□ 0.69
CUL3-202ENST00000344951 SAFB2Q14151 953 aaKnown RBP eCLIP19.31■□□□□ 0.682e-7■■■■□ 22.6
CUL3-202ENST00000344951 CARD11Q9BXL7 1154 aa19.28■□□□□ 0.68
CUL3-202ENST00000344951 WWC1Q8IX03 1113 aa19.28■□□□□ 0.68
CUL3-202ENST00000344951 CREBRFQ8IUR6 639 aa19.26■□□□□ 0.67
CUL3-202ENST00000344951 NRDCO43847 1150 aa19.25■□□□□ 0.67
CUL3-202ENST00000344951 CCDC9Q9Y3X0 531 aaKnown RBP19.24■□□□□ 0.67
CUL3-202ENST00000344951 TNIKQ9UKE5 1360 aa19.24■□□□□ 0.67
CUL3-202ENST00000344951 RSF1Q96T23 1441 aaPredicted RBP19.24■□□□□ 0.67
CUL3-202ENST00000344951 CHAF1AQ13111 956 aaPredicted RBP19.23■□□□□ 0.67
CUL3-202ENST00000344951 EEA1Q15075 1411 aa19.23■□□□□ 0.67
CUL3-202ENST00000344951 KIAA2012Q0VF49 1180 aa19.23■□□□□ 0.67
CUL3-202ENST00000344951 NUDCQ9Y266 331 aa19.21■□□□□ 0.67
CUL3-202ENST00000344951 A0A0U1RQG5 324 aaPredicted RBP19.2■□□□□ 0.66
CUL3-202ENST00000344951 PAK3O75914 559 aaPredicted RBP19.19■□□□□ 0.66
CUL3-202ENST00000344951 HSP90B1P14625 803 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms