RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 KCNH8Q96L42 1107 aa20.12■□□□□ 0.81
COL11A2-201ENST00000341947 NBR1Q14596 966 aa20.11■□□□□ 0.81
COL11A2-201ENST00000341947 GLIPR1L2Q4G1C9 344 aa20.1■□□□□ 0.81
COL11A2-201ENST00000341947 EIF4G2P78344 907 aaKnown RBP eCLIP20.1■□□□□ 0.81
COL11A2-201ENST00000341947 NCLP19338 710 aaKnown RBP20.08■□□□□ 0.81
COL11A2-201ENST00000341947 RRP7BPQ9NSQ0 103 aa20.07■□□□□ 0.8
COL11A2-201ENST00000341947 ARID4BQ4LE39 1312 aaPredicted RBP20.07■□□□□ 0.8
COL11A2-201ENST00000341947 CFAP53Q96M91 514 aa20.06■□□□□ 0.8
COL11A2-201ENST00000341947 PLEKHD1A6NEE1 506 aa20.05■□□□□ 0.8
COL11A2-201ENST00000341947 DCAF1Q9Y4B6 1507 aa20.04■□□□□ 0.8
COL11A2-201ENST00000341947 BECN1Q14457 450 aa20.03■□□□□ 0.8
COL11A2-201ENST00000341947 RSF1Q96T23 1441 aaPredicted RBP20.03■□□□□ 0.8
COL11A2-201ENST00000341947 IRX6P78412 446 aaPredicted RBP20.01■□□□□ 0.79
COL11A2-201ENST00000341947 CLIP1P30622 1438 aa20■□□□□ 0.79
COL11A2-201ENST00000341947 CDCA8Q53HL2 280 aa20■□□□□ 0.79
COL11A2-201ENST00000341947 DDRGK1Q96HY6 314 aa19.99■□□□□ 0.79
COL11A2-201ENST00000341947 HIRIP3Q9BW71 556 aaPredicted RBP19.99■□□□□ 0.79
COL11A2-201ENST00000341947 RGL3Q3MIN7 710 aa19.98■□□□□ 0.79
COL11A2-201ENST00000341947 GOLGA6L22H0YM25 854 aa19.97■□□□□ 0.79
COL11A2-201ENST00000341947 CASC1Q6TDU7 716 aa19.97■□□□□ 0.79
COL11A2-201ENST00000341947 PPM1GO15355 546 aaPredicted RBP19.95■□□□□ 0.78
COL11A2-201ENST00000341947 KNSTRNQ9Y448 316 aa19.94■□□□□ 0.78
COL11A2-201ENST00000341947 ZRSR1Q15695 479 aaKnown RBP19.94■□□□□ 0.78
COL11A2-201ENST00000341947 ANP32EQ9BTT0 268 aa19.91■□□□□ 0.78
COL11A2-201ENST00000341947 FTSJ3Q8IY81 847 aaKnown RBP19.9■□□□□ 0.78
COL11A2-201ENST00000341947 TRIM44Q96DX7 344 aaPredicted RBP19.89■□□□□ 0.78
COL11A2-201ENST00000341947 MAPK8IP3Q9UPT6 1336 aa19.88■□□□□ 0.77
COL11A2-201ENST00000341947 ZCCHC6Q5VYS8 1495 aaKnown RBP19.88■□□□□ 0.77
COL11A2-201ENST00000341947 CFDP1Q9UEE9 299 aaPredicted RBP19.88■□□□□ 0.77
COL11A2-201ENST00000341947 NPHP1O15259 732 aa19.86■□□□□ 0.77
COL11A2-201ENST00000341947 LMOD2Q6P5Q4 547 aa19.86■□□□□ 0.77
COL11A2-201ENST00000341947 MIER1Q8N108 512 aa19.85■□□□□ 0.77
COL11A2-201ENST00000341947 LAS1LQ9Y4W2 734 aaKnown RBP19.85■□□□□ 0.77
COL11A2-201ENST00000341947 POGKQ9P215 609 aa19.85■□□□□ 0.77
COL11A2-201ENST00000341947 NUDCQ9Y266 331 aa19.84■□□□□ 0.77
COL11A2-201ENST00000341947 CARD11Q9BXL7 1154 aa19.84■□□□□ 0.77
COL11A2-201ENST00000341947 TULP1O00294 542 aaPredicted RBP19.82■□□□□ 0.76
COL11A2-201ENST00000341947 GOLGA3Q08378 1498 aa19.82■□□□□ 0.76
COL11A2-201ENST00000341947 PTMAP06454 111 aaKnown RBP19.81■□□□□ 0.76
COL11A2-201ENST00000341947 NEUROD2Q15784 382 aa19.78■□□□□ 0.76
COL11A2-201ENST00000341947 EEA1Q15075 1411 aa19.77■□□□□ 0.76
COL11A2-201ENST00000341947 TPRNQ4KMQ1 711 aa19.76■□□□□ 0.75
COL11A2-201ENST00000341947 CHMP4BQ9H444 224 aaKnown RBP19.75■□□□□ 0.75
COL11A2-201ENST00000341947 OS9Q13438 667 aaPredicted RBP19.75■□□□□ 0.75
COL11A2-201ENST00000341947 RB1CC1Q8TDY2 1594 aa19.74■□□□□ 0.75
COL11A2-201ENST00000341947 SENP3-EIF4A1A0A087X0R7 540 aa19.72■□□□□ 0.75
COL11A2-201ENST00000341947 PNNQ9H307 717 aaKnown RBP19.71■□□□□ 0.75
COL11A2-201ENST00000341947 CEP162Q5TB80 1403 aa19.71■□□□□ 0.75
COL11A2-201ENST00000341947 ERCC6Q03468 1493 aa19.69■□□□□ 0.74
COL11A2-201ENST00000341947 GOLGA2Q08379 1002 aa19.69■□□□□ 0.74
COL11A2-201ENST00000341947 KIF27Q86VH2 1401 aa19.69■□□□□ 0.74
COL11A2-201ENST00000341947 TNNT2P45379 298 aaPredicted RBP19.69■□□□□ 0.74
COL11A2-201ENST00000341947 TAOK2Q9UL54 1235 aa19.69■□□□□ 0.74
COL11A2-201ENST00000341947 FGD1P98174 961 aa19.68■□□□□ 0.74
COL11A2-201ENST00000341947 MS4A1P11836 297 aa19.68■□□□□ 0.74
COL11A2-201ENST00000341947 DNTTIP2Q5QJE6 756 aaKnown RBP19.68■□□□□ 0.74
COL11A2-201ENST00000341947 FRAT1Q92837 279 aaPredicted RBP19.68■□□□□ 0.74
COL11A2-201ENST00000341947 U2SURPO15042 1029 aaKnown RBP19.67■□□□□ 0.74
COL11A2-201ENST00000341947 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
COL11A2-201ENST00000341947 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
COL11A2-201ENST00000341947 GOLGA6L6A8MZA4 724 aa19.65■□□□□ 0.74
COL11A2-201ENST00000341947 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.74
COL11A2-201ENST00000341947 HDGFP51858 240 aaKnown RBP19.64■□□□□ 0.74
COL11A2-201ENST00000341947 KANK1Q14678 1352 aa19.64■□□□□ 0.74
COL11A2-201ENST00000341947 KCNJ4P48050 445 aa19.64■□□□□ 0.73
COL11A2-201ENST00000341947 CC2D1BQ5T0F9 858 aaKnown RBP19.64■□□□□ 0.73
COL11A2-201ENST00000341947 NAP1L2Q9ULW6 460 aaPredicted RBP19.62■□□□□ 0.73
COL11A2-201ENST00000341947 SUPT16HQ9Y5B9 1047 aaKnown RBP19.62■□□□□ 0.73
COL11A2-201ENST00000341947 RGS3P49796 1198 aa19.61■□□□□ 0.73
COL11A2-201ENST00000341947 HSP90AB1P08238 724 aaKnown RBP19.6■□□□□ 0.73
COL11A2-201ENST00000341947 CCNB3Q8WWL7 1395 aa19.6■□□□□ 0.73
COL11A2-201ENST00000341947 TMF1P82094 1093 aa19.59■□□□□ 0.73
COL11A2-201ENST00000341947 PLCB2Q00722 1185 aa19.59■□□□□ 0.73
COL11A2-201ENST00000341947 TRHP20396 242 aaPredicted RBP19.58■□□□□ 0.72
COL11A2-201ENST00000341947 CEP164Q9UPV0 1460 aa19.57■□□□□ 0.72
COL11A2-201ENST00000341947 SRPK2P78362 688 aaKnown RBP19.54■□□□□ 0.72
COL11A2-201ENST00000341947 MLECQ14165 292 aa19.54■□□□□ 0.72
COL11A2-201ENST00000341947 NRDCO43847 1150 aa19.53■□□□□ 0.72
COL11A2-201ENST00000341947 PPP4R2Q9NY27 417 aa19.53■□□□□ 0.72
COL11A2-201ENST00000341947 SOX12O15370 315 aa19.53■□□□□ 0.72
COL11A2-201ENST00000341947 GOLGA6L4A6NEF3 574 aa19.51■□□□□ 0.71
COL11A2-201ENST00000341947 DCAF11Q8TEB1 546 aa19.51■□□□□ 0.71
COL11A2-201ENST00000341947 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
COL11A2-201ENST00000341947 MCCP23508 829 aa19.5■□□□□ 0.71
COL11A2-201ENST00000341947 SIN3AQ96ST3 1273 aa19.5■□□□□ 0.71
COL11A2-201ENST00000341947 EIF4G1Q04637 1599 aaKnown RBP19.49■□□□□ 0.71
COL11A2-201ENST00000341947 MORC1Q86VD1 984 aa19.49■□□□□ 0.71
COL11A2-201ENST00000341947 RTF1Q92541 710 aaKnown RBP19.49■□□□□ 0.71
COL11A2-201ENST00000341947 CLSTN1O94985 981 aa19.48■□□□□ 0.71
COL11A2-201ENST00000341947 ERICH6BQ5W0A0 696 aa19.48■□□□□ 0.71
COL11A2-201ENST00000341947 HSCBQ8IWL3 235 aa19.47■□□□□ 0.71
COL11A2-201ENST00000341947 ISY1Q9ULR0 285 aaKnown RBP19.46■□□□□ 0.71
COL11A2-201ENST00000341947 FHAD1B1AJZ9 1412 aa19.45■□□□□ 0.7
COL11A2-201ENST00000341947 SAFB2Q14151 953 aaKnown RBP eCLIP19.44■□□□□ 0.7
COL11A2-201ENST00000341947 NAP1L5Q96NT1 182 aaPredicted RBP19.43■□□□□ 0.7
COL11A2-201ENST00000341947 CFAP44Q96MT7 982 aa19.43■□□□□ 0.7
COL11A2-201ENST00000341947 HDGFL2Q7Z4V5 671 aaPredicted RBP19.42■□□□□ 0.7
COL11A2-201ENST00000341947 NOP58Q9Y2X3 529 aaKnown RBP19.39■□□□□ 0.69
COL11A2-201ENST00000341947 GNL2Q13823 731 aaKnown RBP19.39■□□□□ 0.69
COL11A2-201ENST00000341947 STK26Q9P289 416 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms