RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 BCL11AQ9H165 835 aa26.14■■□□□ 1.77
SH2B3-201ENST00000341259 TMC1Q8TDI8 760 aa26.13■■□□□ 1.77
SH2B3-201ENST00000341259 EIF4G2P78344 907 aaKnown RBP eCLIP26.12■■□□□ 1.77
SH2B3-201ENST00000341259 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
SH2B3-201ENST00000341259 KCNH8Q96L42 1107 aa26.1■■□□□ 1.77
SH2B3-201ENST00000341259 MRS2Q9HD23 443 aa26.1■■□□□ 1.77
SH2B3-201ENST00000341259 CUX2O14529 1486 aa26.1■■□□□ 1.77
SH2B3-201ENST00000341259 ANP32AP39687 249 aaKnown RBP26.09■■□□□ 1.77
SH2B3-201ENST00000341259 SALL2Q9Y467 1007 aaPredicted RBP26.09■■□□□ 1.77
SH2B3-201ENST00000341259 CARMIL1Q5VZK9 1371 aa26.06■■□□□ 1.76
SH2B3-201ENST00000341259 SMARCA2P51531 1590 aa26.06■■□□□ 1.76
SH2B3-201ENST00000341259 CFDP1Q9UEE9 299 aaPredicted RBP26.05■■□□□ 1.76
SH2B3-201ENST00000341259 ERCC6Q03468 1493 aa26.03■■□□□ 1.76
SH2B3-201ENST00000341259 PLPPR3Q6T4P5 718 aa26.02■■□□□ 1.76
SH2B3-201ENST00000341259 WIZO95785 1651 aa26.01■■□□□ 1.75
SH2B3-201ENST00000341259 FHAD1B1AJZ9 1412 aa26■■□□□ 1.75
SH2B3-201ENST00000341259 NPM2Q86SE8 214 aaKnown RBP26■■□□□ 1.75
SH2B3-201ENST00000341259 TOP2AP11388 1531 aaKnown RBP26■■□□□ 1.75
SH2B3-201ENST00000341259 WDR43Q15061 677 aaKnown RBP eCLIP25.97■■□□□ 1.75
SH2B3-201ENST00000341259 CCNB3Q8WWL7 1395 aa25.95■■□□□ 1.74
SH2B3-201ENST00000341259 EIF4G1Q04637 1599 aaKnown RBP25.93■■□□□ 1.74
SH2B3-201ENST00000341259 SCAF1Q9H7N4 1312 aaKnown RBP25.93■■□□□ 1.74
SH2B3-201ENST00000341259 VPS8Q8N3P4 1428 aa25.9■■□□□ 1.74
SH2B3-201ENST00000341259 SIN3AQ96ST3 1273 aa25.89■■□□□ 1.74
SH2B3-201ENST00000341259 RGL3Q3MIN7 710 aa25.88■■□□□ 1.73
SH2B3-201ENST00000341259 CCDC136Q96JN2 1154 aa25.86■■□□□ 1.73
SH2B3-201ENST00000341259 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.83■■□□□ 1.73
SH2B3-201ENST00000341259 IRX6P78412 446 aaPredicted RBP25.8■■□□□ 1.72
SH2B3-201ENST00000341259 CARD11Q9BXL7 1154 aa25.75■■□□□ 1.71
SH2B3-201ENST00000341259 KANK4Q5T7N3 995 aaPredicted RBP25.74■■□□□ 1.71
SH2B3-201ENST00000341259 SENP3Q9H4L4 574 aaPredicted RBP25.73■■□□□ 1.71
SH2B3-201ENST00000341259 ARHGAP35Q9NRY4 1499 aa25.72■■□□□ 1.71
SH2B3-201ENST00000341259 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
SH2B3-201ENST00000341259 SMARCA4P51532 1647 aa25.71■■□□□ 1.71
SH2B3-201ENST00000341259 UPF2Q9HAU5 1272 aaKnown RBP25.7■■□□□ 1.7
SH2B3-201ENST00000341259 SETD5Q9C0A6 1442 aa25.68■■□□□ 1.7
SH2B3-201ENST00000341259 PPP1R15AO75807 674 aaPredicted RBP25.66■■□□□ 1.7
SH2B3-201ENST00000341259 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
SH2B3-201ENST00000341259 TDRD9Q8NDG6 1382 aaKnown RBP25.64■■□□□ 1.69
SH2B3-201ENST00000341259 CDCA8Q53HL2 280 aa25.64■■□□□ 1.69
SH2B3-201ENST00000341259 CADPSQ9ULU8 1353 aa25.6■■□□□ 1.69
SH2B3-201ENST00000341259 KNSTRNQ9Y448 316 aa25.6■■□□□ 1.69
SH2B3-201ENST00000341259 TIMELESSQ9UNS1 1208 aa25.59■■□□□ 1.69
SH2B3-201ENST00000341259 HSP90AA1P07900 732 aaKnown RBP25.58■■□□□ 1.69
SH2B3-201ENST00000341259 FMN1Q68DA7 1419 aa25.57■■□□□ 1.68
SH2B3-201ENST00000341259 SENP3-EIF4A1A0A087X0R7 540 aa25.55■■□□□ 1.68
SH2B3-201ENST00000341259 RAPGEF2Q9Y4G8 1499 aa25.53■■□□□ 1.68
SH2B3-201ENST00000341259 CARMIL2Q6F5E8 1435 aa25.5■■□□□ 1.67
SH2B3-201ENST00000341259 CFAP53Q96M91 514 aa25.49■■□□□ 1.67
SH2B3-201ENST00000341259 RAB3GAP2Q9H2M9 1393 aa25.49■■□□□ 1.67
SH2B3-201ENST00000341259 SUPT16HQ9Y5B9 1047 aaKnown RBP25.49■■□□□ 1.67
SH2B3-201ENST00000341259 DCAF11Q8TEB1 546 aa25.48■■□□□ 1.67
SH2B3-201ENST00000341259 ARID4BQ4LE39 1312 aaPredicted RBP25.46■■□□□ 1.67
SH2B3-201ENST00000341259 RUSC2Q8N2Y8 1516 aa25.44■■□□□ 1.66
SH2B3-201ENST00000341259 FHOD3Q2V2M9 1422 aa25.43■■□□□ 1.66
SH2B3-201ENST00000341259 KANK1Q14678 1352 aa25.41■■□□□ 1.66
SH2B3-201ENST00000341259 MYH16Q9H6N6 1097 aa25.4■■□□□ 1.66
SH2B3-201ENST00000341259 C14orf37Q86TY3 774 aa25.39■■□□□ 1.66
SH2B3-201ENST00000341259 HSPA5P11021 654 aaKnown RBP25.39■■□□□ 1.65
SH2B3-201ENST00000341259 FOXD1Q16676 465 aa25.39■■□□□ 1.65
SH2B3-201ENST00000341259 CC2D1BQ5T0F9 858 aaKnown RBP25.38■■□□□ 1.65
SH2B3-201ENST00000341259 PKD2Q13563 968 aa25.38■■□□□ 1.65
SH2B3-201ENST00000341259 ZBTB7CA1YPR0 619 aa25.38■■□□□ 1.65
SH2B3-201ENST00000341259 NBR1Q14596 966 aa25.38■■□□□ 1.65
SH2B3-201ENST00000341259 TMF1P82094 1093 aa25.35■■□□□ 1.65
SH2B3-201ENST00000341259 POGKQ9P215 609 aa25.34■■□□□ 1.65
SH2B3-201ENST00000341259 MPHOSPH9Q99550 1183 aa25.34■■□□□ 1.65
SH2B3-201ENST00000341259 PPM1GO15355 546 aaPredicted RBP25.33■■□□□ 1.64
SH2B3-201ENST00000341259 ANP32BQ92688 251 aaKnown RBP25.32■■□□□ 1.64
SH2B3-201ENST00000341259 PLEKHG5O94827 1062 aa25.31■■□□□ 1.64
SH2B3-201ENST00000341259 CCER2I3L3R5 266 aa25.31■■□□□ 1.64
SH2B3-201ENST00000341259 FANCD2Q9BXW9 1451 aa25.31■■□□□ 1.64
SH2B3-201ENST00000341259 NEUROD2Q15784 382 aa25.28■■□□□ 1.64
SH2B3-201ENST00000341259 ANKRD30AQ9BXX3 1397 aa25.27■■□□□ 1.64
SH2B3-201ENST00000341259 TNNT2P45379 298 aaPredicted RBP25.26■■□□□ 1.63
SH2B3-201ENST00000341259 PPP4R2Q9NY27 417 aa25.25■■□□□ 1.63
SH2B3-201ENST00000341259 MAPK8IP3Q9UPT6 1336 aa25.25■■□□□ 1.63
SH2B3-201ENST00000341259 NUDCQ9Y266 331 aa25.24■■□□□ 1.63
SH2B3-201ENST00000341259 NUP155O75694 1391 aa25.24■■□□□ 1.63
SH2B3-201ENST00000341259 DDRGK1Q96HY6 314 aa25.21■■□□□ 1.63
SH2B3-201ENST00000341259 CCDC18Q5T9S5 1454 aa25.2■■□□□ 1.63
SH2B3-201ENST00000341259 FTSJ3Q8IY81 847 aaKnown RBP25.19■■□□□ 1.62
SH2B3-201ENST00000341259 EFCAB2Q5VUJ9 269 aa25.18■■□□□ 1.62
SH2B3-201ENST00000341259 GGT6Q6P531 493 aa25.16■■□□□ 1.62
SH2B3-201ENST00000341259 LAS1LQ9Y4W2 734 aaKnown RBP25.15■■□□□ 1.62
SH2B3-201ENST00000341259 ROCK2O75116 1388 aaKnown RBP25.14■■□□□ 1.62
SH2B3-201ENST00000341259 BECN1Q14457 450 aa25.14■■□□□ 1.61
SH2B3-201ENST00000341259 HNRNPMP52272 730 aaKnown RBP eCLIP25.13■■□□□ 1.613e-7■■■■■ 30.8
SH2B3-201ENST00000341259 U2SURPO15042 1029 aaKnown RBP25.12■■□□□ 1.61
SH2B3-201ENST00000341259 MLECQ14165 292 aa25.11■■□□□ 1.61
SH2B3-201ENST00000341259 JPH4Q96JJ6 628 aa25.11■■□□□ 1.61
SH2B3-201ENST00000341259 FGD5Q6ZNL6 1462 aa25.1■■□□□ 1.61
SH2B3-201ENST00000341259 FRAT1Q92837 279 aaPredicted RBP25.1■■□□□ 1.61
SH2B3-201ENST00000341259 KTN1Q86UP2 1357 aaKnown RBP25.09■■□□□ 1.61
SH2B3-201ENST00000341259 DHX57Q6P158 1386 aaKnown RBP25.09■■□□□ 1.61
SH2B3-201ENST00000341259 L3MBTL2Q969R5 705 aa25.08■■□□□ 1.61
SH2B3-201ENST00000341259 A0A0G2JS52 829 aa25.08■■□□□ 1.61
SH2B3-201ENST00000341259 SRPK2P78362 688 aaKnown RBP25.08■■□□□ 1.61
SH2B3-201ENST00000341259 ARXQ96QS3 562 aa25.07■■□□□ 1.6
SH2B3-201ENST00000341259 MORC1Q86VD1 984 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms