RNA–Protein interactions for RNA: ENST00000337738.5

PTPA-201, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-201ENST00000337738 LRRC9Q6ZRR7 1453 aa26.87■■□□□ 1.89
PTPA-201ENST00000337738 DNMBPQ6XZF7 1577 aa26.86■■□□□ 1.89
PTPA-201ENST00000337738 RAD54L2Q9Y4B4 1467 aa26.85■■□□□ 1.89
PTPA-201ENST00000337738 ATP1B4Q9UN42 357 aaPredicted RBP26.84■■□□□ 1.89
PTPA-201ENST00000337738 RAB3GAP2Q9H2M9 1393 aa26.83■■□□□ 1.89
PTPA-201ENST00000337738 TOPBP1Q92547 1522 aa26.8■■□□□ 1.88
PTPA-201ENST00000337738 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
PTPA-201ENST00000337738 PCF11O94913 1555 aaKnown RBP26.8■■□□□ 1.88
PTPA-201ENST00000337738 PHLDB1Q86UU1 1377 aa26.79■■□□□ 1.88
PTPA-201ENST00000337738 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
PTPA-201ENST00000337738 FAM50AQ14320 339 aaKnown RBP26.78■■□□□ 1.88
PTPA-201ENST00000337738 NESP48681 1621 aa26.77■■□□□ 1.88
PTPA-201ENST00000337738 CFAP43Q8NDM7 1665 aa26.76■■□□□ 1.87
PTPA-201ENST00000337738 FHOD3Q2V2M9 1422 aa26.75■■□□□ 1.87
PTPA-201ENST00000337738 SETD5Q9C0A6 1442 aa26.74■■□□□ 1.87
PTPA-201ENST00000337738 CUL7Q14999 1698 aa26.69■■□□□ 1.86
PTPA-201ENST00000337738 EFCAB5A4FU69 1503 aa26.69■■□□□ 1.86
PTPA-201ENST00000337738 MAPKBP1O60336 1514 aa26.69■■□□□ 1.86
PTPA-201ENST00000337738 FYCO1Q9BQS8 1478 aa26.67■■□□□ 1.86
PTPA-201ENST00000337738 CASKIN1Q8WXD9 1431 aa26.63■■□□□ 1.85
PTPA-201ENST00000337738 CTTNBP2Q8WZ74 1663 aa26.63■■□□□ 1.85
PTPA-201ENST00000337738 AQRO60306 1485 aaKnown RBP eCLIP26.59■■□□□ 1.852e-7■■■■□ 20.4
PTPA-201ENST00000337738 URB2Q14146 1524 aaKnown RBP26.57■■□□□ 1.84
PTPA-201ENST00000337738 LAMC3Q9Y6N6 1575 aa26.56■■□□□ 1.84
PTPA-201ENST00000337738 FMN1Q68DA7 1419 aa26.55■■□□□ 1.84
PTPA-201ENST00000337738 SIN3AQ96ST3 1273 aa26.53■■□□□ 1.84
PTPA-201ENST00000337738 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
PTPA-201ENST00000337738 TDRD9Q8NDG6 1382 aaKnown RBP26.52■■□□□ 1.84
PTPA-201ENST00000337738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.48■■□□□ 1.83
PTPA-201ENST00000337738 MTUS2Q5JR59 1369 aa26.46■■□□□ 1.83
PTPA-201ENST00000337738 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.83
PTPA-201ENST00000337738 SNAPC4Q5SXM2 1469 aa26.45■■□□□ 1.83
PTPA-201ENST00000337738 ABCA5Q8WWZ7 1642 aa26.45■■□□□ 1.83
PTPA-201ENST00000337738 FGD6Q6ZV73 1430 aa26.44■■□□□ 1.82
PTPA-201ENST00000337738 PDS5BQ9NTI5 1447 aa26.43■■□□□ 1.82
PTPA-201ENST00000337738 SAMD9Q5K651 1589 aa26.4■■□□□ 1.82
PTPA-201ENST00000337738 TIMELESSQ9UNS1 1208 aa26.38■■□□□ 1.81
PTPA-201ENST00000337738 GRIN2BQ13224 1484 aa26.32■■□□□ 1.8
PTPA-201ENST00000337738 DDX10Q13206 875 aaKnown RBP26.31■■□□□ 1.8
PTPA-201ENST00000337738 CCDC18Q5T9S5 1454 aa26.31■■□□□ 1.8
PTPA-201ENST00000337738 LRRIQ1Q96JM4 1722 aa26.3■■□□□ 1.8
PTPA-201ENST00000337738 NCOA2Q15596 1464 aa26.3■■□□□ 1.8
PTPA-201ENST00000337738 KIF21AQ7Z4S6 1674 aa26.3■■□□□ 1.8
PTPA-201ENST00000337738 DNAJC5BQ9UF47 199 aa26.29■■□□□ 1.8
PTPA-201ENST00000337738 PPP1R15AO75807 674 aaPredicted RBP26.29■■□□□ 1.8
PTPA-201ENST00000337738 MYOM3Q5VTT5 1437 aa26.28■■□□□ 1.8
PTPA-201ENST00000337738 THOC2Q8NI27 1593 aaKnown RBP26.27■■□□□ 1.8
PTPA-201ENST00000337738 PTPRKQ15262 1439 aa26.27■■□□□ 1.8
PTPA-201ENST00000337738 KCNH8Q96L42 1107 aa26.27■■□□□ 1.8
PTPA-201ENST00000337738 HFM1A2PYH4 1435 aa26.26■■□□□ 1.8
PTPA-201ENST00000337738 SUPT6HQ7KZ85 1726 aaKnown RBP26.25■■□□□ 1.79
PTPA-201ENST00000337738 EHBP1L1Q8N3D4 1523 aa26.25■■□□□ 1.79
PTPA-201ENST00000337738 TONSLQ96HA7 1378 aa26.24■■□□□ 1.79
PTPA-201ENST00000337738 PTPN23Q9H3S7 1636 aa26.23■■□□□ 1.79
PTPA-201ENST00000337738 HIRIP3Q9BW71 556 aaPredicted RBP26.22■■□□□ 1.79
PTPA-201ENST00000337738 SUPT16HQ9Y5B9 1047 aaKnown RBP26.22■■□□□ 1.79
PTPA-201ENST00000337738 UACAQ9BZF9 1416 aa26.22■■□□□ 1.79
PTPA-201ENST00000337738 TARBP1Q13395 1621 aaKnown RBP26.22■■□□□ 1.79
PTPA-201ENST00000337738 NAIPQ13075 1403 aa26.18■■□□□ 1.78
PTPA-201ENST00000337738 UGGT2Q9NYU1 1516 aa26.15■■□□□ 1.78
PTPA-201ENST00000337738 PBRM1Q86U86 1689 aa26.14■■□□□ 1.77
PTPA-201ENST00000337738 MAGI3Q5TCQ9 1506 aa26.13■■□□□ 1.77
PTPA-201ENST00000337738 HECW1Q76N89 1606 aa26.11■■□□□ 1.77
PTPA-201ENST00000337738 IQGAP2Q13576 1575 aa26.1■■□□□ 1.77
PTPA-201ENST00000337738 ARHGEF11O15085 1522 aa26.09■■□□□ 1.77
PTPA-201ENST00000337738 RRP7BPQ9NSQ0 103 aa26.08■■□□□ 1.77
PTPA-201ENST00000337738 CHIC2Q9UKJ5 165 aa26.07■■□□□ 1.76
PTPA-201ENST00000337738 ANP32CO43423 234 aa26.07■■□□□ 1.76
PTPA-201ENST00000337738 ADAMTS12P58397 1594 aa26.05■■□□□ 1.76
PTPA-201ENST00000337738 EPRSP07814 1512 aaKnown RBP26.04■■□□□ 1.76
PTPA-201ENST00000337738 TCOF1Q13428 1488 aaKnown RBP26.03■■□□□ 1.76
PTPA-201ENST00000337738 ARID3CA6NKF2 412 aa26.03■■□□□ 1.76
PTPA-201ENST00000337738 MRC2Q9UBG0 1479 aa26.01■■□□□ 1.75
PTPA-201ENST00000337738 TRIM52Q96A61 297 aa26.01■■□□□ 1.75
PTPA-201ENST00000337738 CDK13Q14004 1512 aaKnown RBP26■■□□□ 1.75
PTPA-201ENST00000337738 CCER2I3L3R5 266 aa26■■□□□ 1.75
PTPA-201ENST00000337738 GCC2Q8IWJ2 1684 aa25.96■■□□□ 1.75
PTPA-201ENST00000337738 WDR62O43379 1518 aa25.96■■□□□ 1.75
PTPA-201ENST00000337738 MIA2Q96PC5 1412 aa25.93■■□□□ 1.74
PTPA-201ENST00000337738 AKNAQ7Z591 1439 aa25.91■■□□□ 1.74
PTPA-201ENST00000337738 KDM5BQ9UGL1 1544 aa25.9■■□□□ 1.74
PTPA-201ENST00000337738 KDM6BO15054 1643 aa25.88■■□□□ 1.73
PTPA-201ENST00000337738 ZNF608Q9ULD9 1512 aaPredicted RBP25.88■■□□□ 1.73
PTPA-201ENST00000337738 IFT140Q96RY7 1462 aa25.87■■□□□ 1.73
PTPA-201ENST00000337738 MPHOSPH9Q99550 1183 aa25.85■■□□□ 1.73
PTPA-201ENST00000337738 DENND4BO75064 1496 aaPredicted RBP25.85■■□□□ 1.73
PTPA-201ENST00000337738 FKBP8Q14318 412 aa25.84■■□□□ 1.73
PTPA-201ENST00000337738 BCANQ96GW7 911 aa25.84■■□□□ 1.73
PTPA-201ENST00000337738 KIAA0586Q9BVV6 1533 aa25.81■■□□□ 1.72
PTPA-201ENST00000337738 KIAA0556O60303 1618 aa25.81■■□□□ 1.72
PTPA-201ENST00000337738 HSPA5P11021 654 aaKnown RBP25.8■■□□□ 1.72
PTPA-201ENST00000337738 NEFLP07196 543 aa25.78■■□□□ 1.72
PTPA-201ENST00000337738 DISP1Q96F81 1524 aa25.78■■□□□ 1.72
PTPA-201ENST00000337738 DAPK1P53355 1430 aa25.78■■□□□ 1.72
PTPA-201ENST00000337738 FOXD1Q16676 465 aa25.78■■□□□ 1.72
PTPA-201ENST00000337738 BCL11AQ9H165 835 aa25.77■■□□□ 1.72
PTPA-201ENST00000337738 EIF4G2P78344 907 aaKnown RBP eCLIP25.75■■□□□ 1.71
PTPA-201ENST00000337738 TSHZ2Q9NRE2 1034 aa25.75■■□□□ 1.71
PTPA-201ENST00000337738 NUP153P49790 1475 aaKnown RBP25.74■■□□□ 1.71
PTPA-201ENST00000337738 CDK11AQ9UQ88 783 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms