RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 FAM9BQ8IZU0 186 aa13.51□□□□□ -0.25
SPTBN1-201ENST00000333896 PNNQ9H307 717 aaKnown RBP13.5□□□□□ -0.25
SPTBN1-201ENST00000333896 PRKCSHP14314 528 aaPredicted RBP13.5□□□□□ -0.25
SPTBN1-201ENST00000333896 PLCB2Q00722 1185 aa13.49□□□□□ -0.25
SPTBN1-201ENST00000333896 SUPT16HQ9Y5B9 1047 aaKnown RBP13.49□□□□□ -0.25
SPTBN1-201ENST00000333896 CSRNP3Q8WYN3 585 aa13.49□□□□□ -0.25
SPTBN1-201ENST00000333896 GOLGA6L6A8MZA4 724 aa13.49□□□□□ -0.25
SPTBN1-201ENST00000333896 TNNT3P45378 269 aaPredicted RBP13.49□□□□□ -0.25
SPTBN1-201ENST00000333896 PKNOX2Q96KN3 472 aa13.46□□□□□ -0.25
SPTBN1-201ENST00000333896 PPP4R2Q9NY27 417 aa13.44□□□□□ -0.26
SPTBN1-201ENST00000333896 LAS1LQ9Y4W2 734 aaKnown RBP13.44□□□□□ -0.26
SPTBN1-201ENST00000333896 IRX6P78412 446 aaPredicted RBP13.44□□□□□ -0.26
SPTBN1-201ENST00000333896 RBM19Q9Y4C8 960 aaKnown RBP13.43□□□□□ -0.26
SPTBN1-201ENST00000333896 NRDCO43847 1150 aa13.43□□□□□ -0.26
SPTBN1-201ENST00000333896 PODXL2Q9NZ53 605 aa13.43□□□□□ -0.26
SPTBN1-201ENST00000333896 MIER1Q8N108 512 aa13.43□□□□□ -0.26
SPTBN1-201ENST00000333896 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.42□□□□□ -0.26
SPTBN1-201ENST00000333896 ARID3AQ99856 593 aa13.42□□□□□ -0.26
SPTBN1-201ENST00000333896 TONSLQ96HA7 1378 aa13.4□□□□□ -0.26
SPTBN1-201ENST00000333896 TAOK2Q9UL54 1235 aa13.38□□□□□ -0.27
SPTBN1-201ENST00000333896 MTERF4Q7Z6M4 381 aaKnown RBP13.37□□□□□ -0.27
SPTBN1-201ENST00000333896 VSIG10Q8N0Z9 540 aa13.36□□□□□ -0.27
SPTBN1-201ENST00000333896 CASC1Q6TDU7 716 aa13.36□□□□□ -0.27
SPTBN1-201ENST00000333896 TMC1Q8TDI8 760 aa13.36□□□□□ -0.27
SPTBN1-201ENST00000333896 A0A0U1RQG5 324 aaPredicted RBP13.36□□□□□ -0.27
SPTBN1-201ENST00000333896 WDR43Q15061 677 aaKnown RBP eCLIP13.35□□□□□ -0.276e-7■□□□□ 10
SPTBN1-201ENST00000333896 HMGB1P09429 215 aaKnown RBP13.34□□□□□ -0.27
SPTBN1-201ENST00000333896 NOC3LQ8WTT2 800 aaKnown RBP13.34□□□□□ -0.27
SPTBN1-201ENST00000333896 A0A0G2JS52 829 aa13.34□□□□□ -0.27
SPTBN1-201ENST00000333896 DRC7Q8IY82 874 aa13.33□□□□□ -0.28
SPTBN1-201ENST00000333896 ZBTB7CA1YPR0 619 aa13.33□□□□□ -0.28
SPTBN1-201ENST00000333896 GOLGA6L3A6NEY3 463 aa13.32□□□□□ -0.28
SPTBN1-201ENST00000333896 MAP7D2Q96T17 732 aa13.32□□□□□ -0.28
SPTBN1-201ENST00000333896 CLSTN1O94985 981 aa13.32□□□□□ -0.28
SPTBN1-201ENST00000333896 SETQ01105 290 aaPredicted RBP13.29□□□□□ -0.28
SPTBN1-201ENST00000333896 KIAA2012Q0VF49 1180 aa13.29□□□□□ -0.28
SPTBN1-201ENST00000333896 DDX10Q13206 875 aaKnown RBP13.29□□□□□ -0.28
SPTBN1-201ENST00000333896 PRM3Q9NNZ6 103 aa13.27□□□□□ -0.28
SPTBN1-201ENST00000333896 FANCIQ9NVI1 1328 aa13.26□□□□□ -0.29
SPTBN1-201ENST00000333896 HSP90AB1P08238 724 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-201ENST00000333896 GOLGA6L1Q8N7Z2 621 aa13.25□□□□□ -0.29
SPTBN1-201ENST00000333896 CFAP44Q96MT7 982 aa13.24□□□□□ -0.29
SPTBN1-201ENST00000333896 IPO9Q96P70 1041 aaKnown RBP13.24□□□□□ -0.29
SPTBN1-201ENST00000333896 APPP05067 770 aa13.24□□□□□ -0.29
SPTBN1-201ENST00000333896 STAG3Q9UJ98 1225 aa13.24□□□□□ -0.29
SPTBN1-201ENST00000333896 TAF3Q5VWG9 929 aa13.23□□□□□ -0.29
SPTBN1-201ENST00000333896 MRS2Q9HD23 443 aa13.23□□□□□ -0.29
SPTBN1-201ENST00000333896 PLPPR3Q6T4P5 718 aa13.22□□□□□ -0.29
SPTBN1-201ENST00000333896 TSHZ2Q9NRE2 1034 aa13.22□□□□□ -0.29
SPTBN1-201ENST00000333896 GBP4Q96PP9 640 aa13.21□□□□□ -0.29
SPTBN1-201ENST00000333896 CHGAP10645 457 aaKnown RBP13.21□□□□□ -0.3
SPTBN1-201ENST00000333896 NAP1L2Q9ULW6 460 aaPredicted RBP13.21□□□□□ -0.3
SPTBN1-201ENST00000333896 GOLGA6L4A6NEF3 574 aa13.19□□□□□ -0.3
SPTBN1-201ENST00000333896 FGD1P98174 961 aa13.18□□□□□ -0.3
SPTBN1-201ENST00000333896 SYAP1Q96A49 352 aaPredicted RBP13.18□□□□□ -0.3
SPTBN1-201ENST00000333896 ESF1Q9H501 851 aaKnown RBP13.18□□□□□ -0.3
SPTBN1-201ENST00000333896 HSCBQ8IWL3 235 aa13.17□□□□□ -0.3
SPTBN1-201ENST00000333896 NOM1Q5C9Z4 860 aaKnown RBP13.16□□□□□ -0.3
SPTBN1-201ENST00000333896 FTSJ3Q8IY81 847 aaKnown RBP13.16□□□□□ -0.3
SPTBN1-201ENST00000333896 GSE1Q14687 1217 aa13.16□□□□□ -0.3
SPTBN1-201ENST00000333896 EEA1Q15075 1411 aa13.16□□□□□ -0.3
SPTBN1-201ENST00000333896 UBE2Q2Q8WVN8 375 aa13.15□□□□□ -0.3
SPTBN1-201ENST00000333896 TCERG1O14776 1098 aaKnown RBP13.15□□□□□ -0.3
SPTBN1-201ENST00000333896 RRP9O43818 475 aaKnown RBP13.15□□□□□ -0.3
SPTBN1-201ENST00000333896 ZNF777Q9ULD5 760 aaPredicted RBP13.14□□□□□ -0.31
SPTBN1-201ENST00000333896 CCER2I3L3R5 266 aa13.14□□□□□ -0.31
SPTBN1-201ENST00000333896 CHMP4BQ9H444 224 aaKnown RBP13.14□□□□□ -0.31
SPTBN1-201ENST00000333896 PHF14O94880 888 aa13.13□□□□□ -0.31
SPTBN1-201ENST00000333896 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
SPTBN1-201ENST00000333896 HTATSF1O43719 755 aaKnown RBP13.13□□□□□ -0.31
SPTBN1-201ENST00000333896 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.13□□□□□ -0.31
SPTBN1-201ENST00000333896 ARID3CA6NKF2 412 aa13.12□□□□□ -0.31
SPTBN1-201ENST00000333896 PLEKHG5O94827 1062 aa13.12□□□□□ -0.31
SPTBN1-201ENST00000333896 CCDC66A2RUB6 948 aa13.12□□□□□ -0.31
SPTBN1-201ENST00000333896 PDE4CQ08493 712 aa13.12□□□□□ -0.31
SPTBN1-201ENST00000333896 SPRYD3Q8NCJ5 442 aa13.11□□□□□ -0.31
SPTBN1-201ENST00000333896 PATL2C9JE40 543 aaKnown RBP13.11□□□□□ -0.31
SPTBN1-201ENST00000333896 TPM2P07951 284 aa13.11□□□□□ -0.31
SPTBN1-201ENST00000333896 KCNJ4P48050 445 aa13.11□□□□□ -0.31
SPTBN1-201ENST00000333896 STK11IPQ8N1F8 1099 aa13.11□□□□□ -0.31
SPTBN1-201ENST00000333896 DDX11L8A8MPP1 907 aa13.09□□□□□ -0.31
SPTBN1-201ENST00000333896 TEX35Q5T0J7 233 aa13.09□□□□□ -0.31
SPTBN1-201ENST00000333896 FBLN2P98095 1184 aa13.08□□□□□ -0.32
SPTBN1-201ENST00000333896 RGS3P49796 1198 aa13.08□□□□□ -0.32
SPTBN1-201ENST00000333896 MS4A1P11836 297 aa13.07□□□□□ -0.32
SPTBN1-201ENST00000333896 GPS2Q13227 327 aa13.07□□□□□ -0.32
SPTBN1-201ENST00000333896 ZNF771Q7L3S4 317 aaPredicted RBP13.07□□□□□ -0.32
SPTBN1-201ENST00000333896 GNL2Q13823 731 aaKnown RBP13.05□□□□□ -0.32
SPTBN1-201ENST00000333896 C14orf37Q86TY3 774 aa13.05□□□□□ -0.32
SPTBN1-201ENST00000333896 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
SPTBN1-201ENST00000333896 KAT6BQ8WYB5 2073 aa13.04□□□□□ -0.32
SPTBN1-201ENST00000333896 SKOR2Q2VWA4 1001 aaPredicted RBP13.04□□□□□ -0.32
SPTBN1-201ENST00000333896 GZF1Q9H116 711 aaPredicted RBP13.04□□□□□ -0.32
SPTBN1-201ENST00000333896 CWC15Q9P013 229 aaKnown RBP13.04□□□□□ -0.32
SPTBN1-201ENST00000333896 EIF4G2P78344 907 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPTBN1-201ENST00000333896 NPHP1O15259 732 aa13.03□□□□□ -0.32
SPTBN1-201ENST00000333896 OS9Q13438 667 aaPredicted RBP13.03□□□□□ -0.32
SPTBN1-201ENST00000333896 SENP3-EIF4A1A0A087X0R7 540 aa13.02□□□□□ -0.32
SPTBN1-201ENST00000333896 GOLGA2Q08379 1002 aa13.02□□□□□ -0.32
SPTBN1-201ENST00000333896 FAM43AQ8N2R8 423 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms