RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 PHLDB1Q86UU1 1377 aa19.67■□□□□ 0.74
TUBA1B-201ENST00000332858 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
TUBA1B-201ENST00000332858 LRRC9Q6ZRR7 1453 aa19.66■□□□□ 0.74
TUBA1B-201ENST00000332858 RAB3GAP2Q9H2M9 1393 aa19.65■□□□□ 0.74
TUBA1B-201ENST00000332858 TOPBP1Q92547 1522 aa19.65■□□□□ 0.74
TUBA1B-201ENST00000332858 DNMBPQ6XZF7 1577 aa19.64■□□□□ 0.73
TUBA1B-201ENST00000332858 FHOD3Q2V2M9 1422 aa19.63■□□□□ 0.73
TUBA1B-201ENST00000332858 MAP3K1Q13233 1512 aa19.62■□□□□ 0.73
TUBA1B-201ENST00000332858 ABCA10Q8WWZ4 1543 aa19.62■□□□□ 0.73
TUBA1B-201ENST00000332858 PELP1Q8IZL8 1130 aaKnown RBP19.62■□□□□ 0.73
TUBA1B-201ENST00000332858 DNAJC5BQ9UF47 199 aa19.61■□□□□ 0.73
TUBA1B-201ENST00000332858 FAM50AQ14320 339 aaKnown RBP19.6■□□□□ 0.73
TUBA1B-201ENST00000332858 PCF11O94913 1555 aaKnown RBP19.6■□□□□ 0.73
TUBA1B-201ENST00000332858 FHAD1B1AJZ9 1412 aa19.58■□□□□ 0.73
TUBA1B-201ENST00000332858 MAPKBP1O60336 1514 aa19.56■□□□□ 0.72
TUBA1B-201ENST00000332858 SETD5Q9C0A6 1442 aa19.54■□□□□ 0.72
TUBA1B-201ENST00000332858 TDRD9Q8NDG6 1382 aaKnown RBP19.53■□□□□ 0.72
TUBA1B-201ENST00000332858 URB2Q14146 1524 aaKnown RBP19.53■□□□□ 0.72
TUBA1B-201ENST00000332858 SIN3AQ96ST3 1273 aa19.51■□□□□ 0.71
TUBA1B-201ENST00000332858 CFAP43Q8NDM7 1665 aa19.51■□□□□ 0.71
TUBA1B-201ENST00000332858 CASKIN1Q8WXD9 1431 aa19.47■□□□□ 0.71
TUBA1B-201ENST00000332858 FYCO1Q9BQS8 1478 aa19.46■□□□□ 0.71
TUBA1B-201ENST00000332858 CUL7Q14999 1698 aa19.45■□□□□ 0.7
TUBA1B-201ENST00000332858 EFCAB5A4FU69 1503 aa19.44■□□□□ 0.7
TUBA1B-201ENST00000332858 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
TUBA1B-201ENST00000332858 LAMC3Q9Y6N6 1575 aa19.42■□□□□ 0.7
TUBA1B-201ENST00000332858 WDR97A6NE52 1622 aa19.41■□□□□ 0.7
TUBA1B-201ENST00000332858 AQRO60306 1485 aaKnown RBP eCLIP19.39■□□□□ 0.71e-8■■■■■ 35
TUBA1B-201ENST00000332858 SNAPC4Q5SXM2 1469 aa19.39■□□□□ 0.69
TUBA1B-201ENST00000332858 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
TUBA1B-201ENST00000332858 FMN1Q68DA7 1419 aa19.37■□□□□ 0.69
TUBA1B-201ENST00000332858 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
TUBA1B-201ENST00000332858 KCNH8Q96L42 1107 aa19.36■□□□□ 0.69
TUBA1B-201ENST00000332858 FGD6Q6ZV73 1430 aa19.34■□□□□ 0.69
TUBA1B-201ENST00000332858 MTUS2Q5JR59 1369 aa19.34■□□□□ 0.69
TUBA1B-201ENST00000332858 PDS5BQ9NTI5 1447 aa19.33■□□□□ 0.69
TUBA1B-201ENST00000332858 PTPRKQ15262 1439 aa19.33■□□□□ 0.69
TUBA1B-201ENST00000332858 LRRIQ1Q96JM4 1722 aa19.33■□□□□ 0.68
TUBA1B-201ENST00000332858 HIRIP3Q9BW71 556 aaPredicted RBP19.32■□□□□ 0.68
TUBA1B-201ENST00000332858 KIF21AQ7Z4S6 1674 aa19.31■□□□□ 0.68
TUBA1B-201ENST00000332858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.3■□□□□ 0.686e-10■■□□□ 13.6
TUBA1B-201ENST00000332858 SAMD9Q5K651 1589 aa19.3■□□□□ 0.68
TUBA1B-201ENST00000332858 DDX10Q13206 875 aaKnown RBP19.28■□□□□ 0.68
TUBA1B-201ENST00000332858 MYT1Q01538 1121 aa19.27■□□□□ 0.68
TUBA1B-201ENST00000332858 GRIN2BQ13224 1484 aa19.27■□□□□ 0.67
TUBA1B-201ENST00000332858 PPP1R15AO75807 674 aaPredicted RBP19.25■□□□□ 0.67
TUBA1B-201ENST00000332858 NCOA2Q15596 1464 aa19.25■□□□□ 0.67
TUBA1B-201ENST00000332858 TARBP1Q13395 1621 aaKnown RBP19.24■□□□□ 0.67
TUBA1B-201ENST00000332858 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
TUBA1B-201ENST00000332858 MYOM3Q5VTT5 1437 aa19.21■□□□□ 0.67
TUBA1B-201ENST00000332858 MAGI3Q5TCQ9 1506 aa19.21■□□□□ 0.67
TUBA1B-201ENST00000332858 ARID3CA6NKF2 412 aa19.2■□□□□ 0.66
TUBA1B-201ENST00000332858 HFM1A2PYH4 1435 aa19.2■□□□□ 0.66
TUBA1B-201ENST00000332858 TIMELESSQ9UNS1 1208 aa19.2■□□□□ 0.66
TUBA1B-201ENST00000332858 NAIPQ13075 1403 aa19.18■□□□□ 0.66
TUBA1B-201ENST00000332858 CHIC2Q9UKJ5 165 aa19.17■□□□□ 0.66
TUBA1B-201ENST00000332858 PTPN23Q9H3S7 1636 aa19.17■□□□□ 0.66
TUBA1B-201ENST00000332858 SUPT16HQ9Y5B9 1047 aaKnown RBP19.16■□□□□ 0.66
TUBA1B-201ENST00000332858 RRP7BPQ9NSQ0 103 aa19.16■□□□□ 0.66
TUBA1B-201ENST00000332858 UACAQ9BZF9 1416 aa19.15■□□□□ 0.66
TUBA1B-201ENST00000332858 SUPT6HQ7KZ85 1726 aaKnown RBP19.14■□□□□ 0.65
TUBA1B-201ENST00000332858 TONSLQ96HA7 1378 aa19.13■□□□□ 0.65
TUBA1B-201ENST00000332858 EHBP1L1Q8N3D4 1523 aa19.13■□□□□ 0.65
TUBA1B-201ENST00000332858 UGGT2Q9NYU1 1516 aa19.12■□□□□ 0.65
TUBA1B-201ENST00000332858 THOC2Q8NI27 1593 aaKnown RBP19.11■□□□□ 0.65
TUBA1B-201ENST00000332858 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
TUBA1B-201ENST00000332858 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
TUBA1B-201ENST00000332858 CDK13Q14004 1512 aaKnown RBP19.08■□□□□ 0.65
TUBA1B-201ENST00000332858 IQGAP2Q13576 1575 aa19.08■□□□□ 0.64
TUBA1B-201ENST00000332858 EPRSP07814 1512 aaKnown RBP19.07■□□□□ 0.64
TUBA1B-201ENST00000332858 ZNF608Q9ULD9 1512 aaPredicted RBP19.07■□□□□ 0.64
TUBA1B-201ENST00000332858 ADAMTS12P58397 1594 aa19.06■□□□□ 0.64
TUBA1B-201ENST00000332858 MRC2Q9UBG0 1479 aa19.04■□□□□ 0.64
TUBA1B-201ENST00000332858 DENND4BO75064 1496 aaPredicted RBP19.03■□□□□ 0.64
TUBA1B-201ENST00000332858 KDM6BO15054 1643 aa19.03■□□□□ 0.64
TUBA1B-201ENST00000332858 HECW1Q76N89 1606 aa19.02■□□□□ 0.64
TUBA1B-201ENST00000332858 TRIM52Q96A61 297 aa19.02■□□□□ 0.64
TUBA1B-201ENST00000332858 KDM5BQ9UGL1 1544 aa19.02■□□□□ 0.64
TUBA1B-201ENST00000332858 TCOF1Q13428 1488 aaKnown RBP19.01■□□□□ 0.63
TUBA1B-201ENST00000332858 FOXD1Q16676 465 aa18.99■□□□□ 0.63
TUBA1B-201ENST00000332858 WDR62O43379 1518 aa18.99■□□□□ 0.63
TUBA1B-201ENST00000332858 ANP32CO43423 234 aa18.97■□□□□ 0.63
TUBA1B-201ENST00000332858 DAXXQ9UER7 740 aaPredicted RBP18.97■□□□□ 0.63
TUBA1B-201ENST00000332858 ZNF644Q9H582 1327 aaPredicted RBP18.96■□□□□ 0.63
TUBA1B-201ENST00000332858 MPHOSPH9Q99550 1183 aa18.94■□□□□ 0.62
TUBA1B-201ENST00000332858 DISP1Q96F81 1524 aa18.93■□□□□ 0.62
TUBA1B-201ENST00000332858 MIA2Q96PC5 1412 aa18.92■□□□□ 0.62
TUBA1B-201ENST00000332858 CCER2I3L3R5 266 aa18.92■□□□□ 0.62
TUBA1B-201ENST00000332858 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
TUBA1B-201ENST00000332858 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
TUBA1B-201ENST00000332858 BCANQ96GW7 911 aa18.91■□□□□ 0.62
TUBA1B-201ENST00000332858 KIAA0586Q9BVV6 1533 aa18.9■□□□□ 0.62
TUBA1B-201ENST00000332858 HSPA5P11021 654 aaKnown RBP18.89■□□□□ 0.62
TUBA1B-201ENST00000332858 NUP153P49790 1475 aaKnown RBP18.89■□□□□ 0.61
TUBA1B-201ENST00000332858 L3MBTL2Q969R5 705 aa18.88■□□□□ 0.61
TUBA1B-201ENST00000332858 KIAA0556O60303 1618 aa18.88■□□□□ 0.61
TUBA1B-201ENST00000332858 AKNAQ7Z591 1439 aa18.87■□□□□ 0.61
TUBA1B-201ENST00000332858 WASHC2AQ641Q2 1341 aa18.87■□□□□ 0.61
TUBA1B-201ENST00000332858 FKBP8Q14318 412 aa18.87■□□□□ 0.61
TUBA1B-201ENST00000332858 ABCC5O15440 1437 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms