RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 MTUS2Q5JR59 1369 aa25.24■■□□□ 1.63
NPLOC4-201ENST00000331134 GOLGA3Q08378 1498 aa25.22■■□□□ 1.63
NPLOC4-201ENST00000331134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.22■■□□□ 1.635e-7■■□□□ 13.1
NPLOC4-201ENST00000331134 PPP4R2Q9NY27 417 aa25.21■■□□□ 1.63
NPLOC4-201ENST00000331134 ANP32BQ92688 251 aaKnown RBP25.19■■□□□ 1.62
NPLOC4-201ENST00000331134 NEFMP07197 916 aa25.18■■□□□ 1.62
NPLOC4-201ENST00000331134 NOP58Q9Y2X3 529 aaKnown RBP25.17■■□□□ 1.62
NPLOC4-201ENST00000331134 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.17■■□□□ 1.62
NPLOC4-201ENST00000331134 CHGAP10645 457 aaKnown RBP25.15■■□□□ 1.62
NPLOC4-201ENST00000331134 DEKP35659 375 aaKnown RBP25.15■■□□□ 1.62
NPLOC4-201ENST00000331134 WDR43Q15061 677 aaKnown RBP eCLIP25.15■■□□□ 1.62
NPLOC4-201ENST00000331134 GLIPR1L2Q4G1C9 344 aa25.11■■□□□ 1.61
NPLOC4-201ENST00000331134 KCNH8Q96L42 1107 aa25.1■■□□□ 1.61
NPLOC4-201ENST00000331134 SOGA1O94964 1423 aa25.08■■□□□ 1.61
NPLOC4-201ENST00000331134 EEA1Q15075 1411 aa25.04■■□□□ 1.6
NPLOC4-201ENST00000331134 RGL3Q3MIN7 710 aa25.04■■□□□ 1.6
NPLOC4-201ENST00000331134 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
NPLOC4-201ENST00000331134 RGS3P49796 1198 aa25.02■■□□□ 1.6
NPLOC4-201ENST00000331134 KANK4Q5T7N3 995 aaPredicted RBP24.98■■□□□ 1.59
NPLOC4-201ENST00000331134 SENP3Q9H4L4 574 aaPredicted RBP24.97■■□□□ 1.59
NPLOC4-201ENST00000331134 DDRGK1Q96HY6 314 aa24.97■■□□□ 1.59
NPLOC4-201ENST00000331134 TSPY4P0CV99 314 aa24.94■■□□□ 1.58
NPLOC4-201ENST00000331134 TSPY10P0CW01 314 aa24.94■■□□□ 1.58
NPLOC4-201ENST00000331134 PPM1GO15355 546 aaPredicted RBP24.94■■□□□ 1.58
NPLOC4-201ENST00000331134 CCNB3Q8WWL7 1395 aa24.92■■□□□ 1.58
NPLOC4-201ENST00000331134 CECR2Q9BXF3 1484 aa24.9■■□□□ 1.58
NPLOC4-201ENST00000331134 CEP164Q9UPV0 1460 aa24.9■■□□□ 1.58
NPLOC4-201ENST00000331134 CCER2I3L3R5 266 aa24.86■■□□□ 1.57
NPLOC4-201ENST00000331134 CARD11Q9BXL7 1154 aa24.86■■□□□ 1.57
NPLOC4-201ENST00000331134 NEUROD2Q15784 382 aa24.86■■□□□ 1.57
NPLOC4-201ENST00000331134 BECN1Q14457 450 aa24.85■■□□□ 1.57
NPLOC4-201ENST00000331134 TRIM44Q96DX7 344 aaPredicted RBP24.82■■□□□ 1.56
NPLOC4-201ENST00000331134 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.81■■□□□ 1.56
NPLOC4-201ENST00000331134 ERICH6BQ5W0A0 696 aa24.79■■□□□ 1.56
NPLOC4-201ENST00000331134 RB1CC1Q8TDY2 1594 aa24.79■■□□□ 1.56
NPLOC4-201ENST00000331134 HSPA5P11021 654 aaKnown RBP24.79■■□□□ 1.56
NPLOC4-201ENST00000331134 NAP1L5Q96NT1 182 aaPredicted RBP24.77■■□□□ 1.56
NPLOC4-201ENST00000331134 FOXD1Q16676 465 aa24.76■■□□□ 1.55
NPLOC4-201ENST00000331134 CC2D1BQ5T0F9 858 aaKnown RBP24.76■■□□□ 1.55
NPLOC4-201ENST00000331134 FRAT1Q92837 279 aaPredicted RBP24.73■■□□□ 1.55
NPLOC4-201ENST00000331134 NCLP19338 710 aaKnown RBP24.72■■□□□ 1.55
NPLOC4-201ENST00000331134 CCDC88BA6NC98 1476 aa24.72■■□□□ 1.55
NPLOC4-201ENST00000331134 VPS8Q8N3P4 1428 aa24.7■■□□□ 1.54
NPLOC4-201ENST00000331134 TPRNQ4KMQ1 711 aa24.69■■□□□ 1.54
NPLOC4-201ENST00000331134 RAB3GAP2Q9H2M9 1393 aa24.68■■□□□ 1.54
NPLOC4-201ENST00000331134 KNSTRNQ9Y448 316 aa24.68■■□□□ 1.54
NPLOC4-201ENST00000331134 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
NPLOC4-201ENST00000331134 SPRYD3Q8NCJ5 442 aa24.66■■□□□ 1.54
NPLOC4-201ENST00000331134 KIF27Q86VH2 1401 aa24.65■■□□□ 1.54
NPLOC4-201ENST00000331134 ARID4BQ4LE39 1312 aaPredicted RBP24.65■■□□□ 1.54
NPLOC4-201ENST00000331134 TNNT2P45379 298 aaPredicted RBP24.64■■□□□ 1.54
NPLOC4-201ENST00000331134 PPP1R15AO75807 674 aaPredicted RBP24.64■■□□□ 1.53
NPLOC4-201ENST00000331134 CFDP1Q9UEE9 299 aaPredicted RBP24.64■■□□□ 1.53
NPLOC4-201ENST00000331134 STAG3Q9UJ98 1225 aa24.64■■□□□ 1.53
NPLOC4-201ENST00000331134 SETD5Q9C0A6 1442 aa24.63■■□□□ 1.53
NPLOC4-201ENST00000331134 TIMELESSQ9UNS1 1208 aa24.62■■□□□ 1.53
NPLOC4-201ENST00000331134 DCAF11Q8TEB1 546 aa24.55■■□□□ 1.52
NPLOC4-201ENST00000331134 MYH16Q9H6N6 1097 aa24.55■■□□□ 1.52
NPLOC4-201ENST00000331134 FTSJ3Q8IY81 847 aaKnown RBP24.55■■□□□ 1.52
NPLOC4-201ENST00000331134 PLPPR3Q6T4P5 718 aa24.55■■□□□ 1.52
NPLOC4-201ENST00000331134 GOLGA6L22H0YM25 854 aa24.54■■□□□ 1.52
NPLOC4-201ENST00000331134 IPO9Q96P70 1041 aaKnown RBP24.53■■□□□ 1.52
NPLOC4-201ENST00000331134 SLKQ9H2G2 1235 aaPredicted RBP24.53■■□□□ 1.52
NPLOC4-201ENST00000331134 CHMP7Q8WUX9 453 aaPredicted RBP24.5■■□□□ 1.51
NPLOC4-201ENST00000331134 DHX57Q6P158 1386 aaKnown RBP24.5■■□□□ 1.51
NPLOC4-201ENST00000331134 RCAN3Q9UKA8 241 aa24.5■■□□□ 1.51
NPLOC4-201ENST00000331134 PTMAP06454 111 aaKnown RBP24.49■■□□□ 1.51
NPLOC4-201ENST00000331134 GZF1Q9H116 711 aaPredicted RBP24.49■■□□□ 1.51
NPLOC4-201ENST00000331134 PLEKHD1A6NEE1 506 aa24.48■■□□□ 1.51
NPLOC4-201ENST00000331134 DNTTIP2Q5QJE6 756 aaKnown RBP24.47■■□□□ 1.51
NPLOC4-201ENST00000331134 MROH2BQ7Z745 1585 aa24.47■■□□□ 1.51
NPLOC4-201ENST00000331134 BAZ1BQ9UIG0 1483 aaKnown RBP24.47■■□□□ 1.51
NPLOC4-201ENST00000331134 SLC4A3P48751 1232 aa24.43■■□□□ 1.5
NPLOC4-201ENST00000331134 L3MBTL2Q969R5 705 aa24.42■■□□□ 1.5
NPLOC4-201ENST00000331134 PLEKHG5O94827 1062 aa24.41■■□□□ 1.5
NPLOC4-201ENST00000331134 PLCB2Q00722 1185 aa24.4■■□□□ 1.5
NPLOC4-201ENST00000331134 NUDCQ9Y266 331 aa24.4■■□□□ 1.5
NPLOC4-201ENST00000331134 TCERG1O14776 1098 aaKnown RBP24.39■■□□□ 1.5
NPLOC4-201ENST00000331134 CARMIL1Q5VZK9 1371 aa24.38■■□□□ 1.49
NPLOC4-201ENST00000331134 CFAP53Q96M91 514 aa24.38■■□□□ 1.49
NPLOC4-201ENST00000331134 HSP90AB1P08238 724 aaKnown RBP24.37■■□□□ 1.49
NPLOC4-201ENST00000331134 RUSC2Q8N2Y8 1516 aa24.36■■□□□ 1.49
NPLOC4-201ENST00000331134 MPHOSPH9Q99550 1183 aa24.35■■□□□ 1.49
NPLOC4-201ENST00000331134 PKD2Q13563 968 aa24.34■■□□□ 1.49
NPLOC4-201ENST00000331134 CDCA8Q53HL2 280 aa24.34■■□□□ 1.49
NPLOC4-201ENST00000331134 U2SURPO15042 1029 aaKnown RBP24.33■■□□□ 1.49
NPLOC4-201ENST00000331134 ZBTB7CA1YPR0 619 aa24.33■■□□□ 1.48
NPLOC4-201ENST00000331134 ESF1Q9H501 851 aaKnown RBP24.32■■□□□ 1.48
NPLOC4-201ENST00000331134 FHAD1B1AJZ9 1412 aa24.32■■□□□ 1.48
NPLOC4-201ENST00000331134 ARID3AQ99856 593 aa24.32■■□□□ 1.48
NPLOC4-201ENST00000331134 BAZ1AQ9NRL2 1556 aaPredicted RBP24.31■■□□□ 1.48
NPLOC4-201ENST00000331134 CUX2O14529 1486 aa24.3■■□□□ 1.48
NPLOC4-201ENST00000331134 PLIN1O60240 522 aa24.29■■□□□ 1.48
NPLOC4-201ENST00000331134 TMF1P82094 1093 aa24.28■■□□□ 1.48
NPLOC4-201ENST00000331134 HSCBQ8IWL3 235 aa24.26■■□□□ 1.47
NPLOC4-201ENST00000331134 MAPK8IP3Q9UPT6 1336 aa24.25■■□□□ 1.47
NPLOC4-201ENST00000331134 L1TD1Q5T7N2 865 aaKnown RBP24.25■■□□□ 1.47
NPLOC4-201ENST00000331134 FANCIQ9NVI1 1328 aa24.25■■□□□ 1.47
NPLOC4-201ENST00000331134 PNNQ9H307 717 aaKnown RBP24.25■■□□□ 1.47
NPLOC4-201ENST00000331134 PRKRIP1Q9H875 184 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms