RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 MIER1Q8N108 512 aa20.42■□□□□ 0.86
PTPN21-201ENST00000328736 PPP1R15AO75807 674 aaPredicted RBP20.4■□□□□ 0.86
PTPN21-201ENST00000328736 C14orf37Q86TY3 774 aa20.4■□□□□ 0.86
PTPN21-201ENST00000328736 MRS2Q9HD23 443 aa20.39■□□□□ 0.86
PTPN21-201ENST00000328736 NBR1Q14596 966 aa20.38■□□□□ 0.85
PTPN21-201ENST00000328736 ARXQ96QS3 562 aa20.36■□□□□ 0.85
PTPN21-201ENST00000328736 RRP7BPQ9NSQ0 103 aa20.35■□□□□ 0.85
PTPN21-201ENST00000328736 BECN1Q14457 450 aa20.34■□□□□ 0.85
PTPN21-201ENST00000328736 MTUS2Q5JR59 1369 aa20.34■□□□□ 0.85
PTPN21-201ENST00000328736 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
PTPN21-201ENST00000328736 DDRGK1Q96HY6 314 aa20.32■□□□□ 0.84
PTPN21-201ENST00000328736 HAP1P54257 671 aaPredicted RBP20.31■□□□□ 0.84
PTPN21-201ENST00000328736 PLEKHG5O94827 1062 aa20.31■□□□□ 0.84
PTPN21-201ENST00000328736 ANP32EQ9BTT0 268 aa20.3■□□□□ 0.84
PTPN21-201ENST00000328736 GOLGA6L22H0YM25 854 aa20.3■□□□□ 0.84
PTPN21-201ENST00000328736 ZRSR1Q15695 479 aaKnown RBP20.28■□□□□ 0.84
PTPN21-201ENST00000328736 CLIP1P30622 1438 aa20.27■□□□□ 0.84
PTPN21-201ENST00000328736 CFAP53Q96M91 514 aa20.27■□□□□ 0.84
PTPN21-201ENST00000328736 CASC1Q6TDU7 716 aa20.27■□□□□ 0.83
PTPN21-201ENST00000328736 EIF4G2P78344 907 aaKnown RBP eCLIP20.24■□□□□ 0.83
PTPN21-201ENST00000328736 TRIM44Q96DX7 344 aaPredicted RBP20.23■□□□□ 0.83
PTPN21-201ENST00000328736 CDCA8Q53HL2 280 aa20.21■□□□□ 0.83
PTPN21-201ENST00000328736 KCNH8Q96L42 1107 aa20.2■□□□□ 0.82
PTPN21-201ENST00000328736 RSF1Q96T23 1441 aaPredicted RBP20.16■□□□□ 0.82
PTPN21-201ENST00000328736 CEP162Q5TB80 1403 aa20.15■□□□□ 0.82
PTPN21-201ENST00000328736 ARID4BQ4LE39 1312 aaPredicted RBP20.15■□□□□ 0.82
PTPN21-201ENST00000328736 RGL3Q3MIN7 710 aa20.14■□□□□ 0.82
PTPN21-201ENST00000328736 PLEKHD1A6NEE1 506 aa20.13■□□□□ 0.81
PTPN21-201ENST00000328736 PTMAP06454 111 aaKnown RBP20.12■□□□□ 0.81
PTPN21-201ENST00000328736 FTSJ3Q8IY81 847 aaKnown RBP20.1■□□□□ 0.81
PTPN21-201ENST00000328736 KNSTRNQ9Y448 316 aa20.1■□□□□ 0.81
PTPN21-201ENST00000328736 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
PTPN21-201ENST00000328736 NPHP1O15259 732 aa20.08■□□□□ 0.8
PTPN21-201ENST00000328736 MAPK8IP3Q9UPT6 1336 aa20.07■□□□□ 0.8
PTPN21-201ENST00000328736 GOLGA3Q08378 1498 aa20.07■□□□□ 0.8
PTPN21-201ENST00000328736 TNNT2P45379 298 aaPredicted RBP20.06■□□□□ 0.8
PTPN21-201ENST00000328736 TULP1O00294 542 aaPredicted RBP20.06■□□□□ 0.8
PTPN21-201ENST00000328736 PPM1GO15355 546 aaPredicted RBP20.05■□□□□ 0.8
PTPN21-201ENST00000328736 CHMP4BQ9H444 224 aaKnown RBP20.05■□□□□ 0.8
PTPN21-201ENST00000328736 NUDCQ9Y266 331 aa20.05■□□□□ 0.8
PTPN21-201ENST00000328736 GOLGA6L6A8MZA4 724 aa20.02■□□□□ 0.8
PTPN21-201ENST00000328736 SIN3AQ96ST3 1273 aa20.01■□□□□ 0.79
PTPN21-201ENST00000328736 DNTTIP2Q5QJE6 756 aaKnown RBP20■□□□□ 0.79
PTPN21-201ENST00000328736 LAS1LQ9Y4W2 734 aaKnown RBP19.99■□□□□ 0.79
PTPN21-201ENST00000328736 POGKQ9P215 609 aa19.97■□□□□ 0.79
PTPN21-201ENST00000328736 PNNQ9H307 717 aaKnown RBP19.97■□□□□ 0.79
PTPN21-201ENST00000328736 LMOD2Q6P5Q4 547 aa19.96■□□□□ 0.79
PTPN21-201ENST00000328736 SUPT16HQ9Y5B9 1047 aaKnown RBP19.96■□□□□ 0.79
PTPN21-201ENST00000328736 MS4A1P11836 297 aa19.96■□□□□ 0.79
PTPN21-201ENST00000328736 OS9Q13438 667 aaPredicted RBP19.96■□□□□ 0.79
PTPN21-201ENST00000328736 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
PTPN21-201ENST00000328736 WRNQ14191 1432 aaPredicted RBP eCLIP19.95■□□□□ 0.78
PTPN21-201ENST00000328736 CARD11Q9BXL7 1154 aa19.94■□□□□ 0.78
PTPN21-201ENST00000328736 GOLGA2Q08379 1002 aa19.94■□□□□ 0.78
PTPN21-201ENST00000328736 FGD1P98174 961 aa19.93■□□□□ 0.78
PTPN21-201ENST00000328736 CFDP1Q9UEE9 299 aaPredicted RBP19.93■□□□□ 0.78
PTPN21-201ENST00000328736 TPRNQ4KMQ1 711 aa19.93■□□□□ 0.78
PTPN21-201ENST00000328736 NRDCO43847 1150 aa19.91■□□□□ 0.78
PTPN21-201ENST00000328736 NEUROD2Q15784 382 aa19.91■□□□□ 0.78
PTPN21-201ENST00000328736 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.78
PTPN21-201ENST00000328736 KCNJ4P48050 445 aa19.88■□□□□ 0.77
PTPN21-201ENST00000328736 HSP90AB1P08238 724 aaKnown RBP19.86■□□□□ 0.77
PTPN21-201ENST00000328736 EEA1Q15075 1411 aa19.85■□□□□ 0.77
PTPN21-201ENST00000328736 CC2D1BQ5T0F9 858 aaKnown RBP19.85■□□□□ 0.77
PTPN21-201ENST00000328736 HDGFP51858 240 aaKnown RBP19.84■□□□□ 0.77
PTPN21-201ENST00000328736 TAOK2Q9UL54 1235 aa19.84■□□□□ 0.77
PTPN21-201ENST00000328736 NAP1L2Q9ULW6 460 aaPredicted RBP19.84■□□□□ 0.77
PTPN21-201ENST00000328736 ERICH6BQ5W0A0 696 aa19.83■□□□□ 0.77
PTPN21-201ENST00000328736 PLCB2Q00722 1185 aa19.83■□□□□ 0.77
PTPN21-201ENST00000328736 FRAT1Q92837 279 aaPredicted RBP19.82■□□□□ 0.76
PTPN21-201ENST00000328736 TNIKQ9UKE5 1360 aa19.81■□□□□ 0.76
PTPN21-201ENST00000328736 KIF27Q86VH2 1401 aa19.8■□□□□ 0.76
PTPN21-201ENST00000328736 GOLGA6L4A6NEF3 574 aa19.79■□□□□ 0.76
PTPN21-201ENST00000328736 U2SURPO15042 1029 aaKnown RBP19.79■□□□□ 0.76
PTPN21-201ENST00000328736 KANK1Q14678 1352 aa19.79■□□□□ 0.76
PTPN21-201ENST00000328736 CEP164Q9UPV0 1460 aa19.79■□□□□ 0.76
PTPN21-201ENST00000328736 MCCP23508 829 aa19.78■□□□□ 0.76
PTPN21-201ENST00000328736 CFAP44Q96MT7 982 aa19.77■□□□□ 0.76
PTPN21-201ENST00000328736 EIF4G1Q04637 1599 aaKnown RBP19.77■□□□□ 0.76
PTPN21-201ENST00000328736 CLSTN1O94985 981 aa19.76■□□□□ 0.75
PTPN21-201ENST00000328736 RGS3P49796 1198 aa19.76■□□□□ 0.75
PTPN21-201ENST00000328736 L1TD1Q5T7N2 865 aaKnown RBP19.75■□□□□ 0.75
PTPN21-201ENST00000328736 NAP1L5Q96NT1 182 aaPredicted RBP19.74■□□□□ 0.75
PTPN21-201ENST00000328736 SOGA1O94964 1423 aa19.74■□□□□ 0.75
PTPN21-201ENST00000328736 PPP4R2Q9NY27 417 aa19.73■□□□□ 0.75
PTPN21-201ENST00000328736 TMF1P82094 1093 aa19.73■□□□□ 0.75
PTPN21-201ENST00000328736 HSCBQ8IWL3 235 aa19.72■□□□□ 0.75
PTPN21-201ENST00000328736 CHAF1AQ13111 956 aaPredicted RBP19.72■□□□□ 0.75
PTPN21-201ENST00000328736 CECR2Q9BXF3 1484 aa19.71■□□□□ 0.75
PTPN21-201ENST00000328736 B4GALNT3Q6L9W6 998 aa19.69■□□□□ 0.74
PTPN21-201ENST00000328736 ERCC6Q03468 1493 aa19.69■□□□□ 0.74
PTPN21-201ENST00000328736 FOXD1Q16676 465 aa19.68■□□□□ 0.74
PTPN21-201ENST00000328736 ISY1Q9ULR0 285 aaKnown RBP19.68■□□□□ 0.74
PTPN21-201ENST00000328736 RTF1Q92541 710 aaKnown RBP19.67■□□□□ 0.74
PTPN21-201ENST00000328736 CCNB3Q8WWL7 1395 aa19.66■□□□□ 0.74
PTPN21-201ENST00000328736 DCAF11Q8TEB1 546 aa19.66■□□□□ 0.74
PTPN21-201ENST00000328736 GNL2Q13823 731 aaKnown RBP19.65■□□□□ 0.74
PTPN21-201ENST00000328736 SRPK2P78362 688 aaKnown RBP19.65■□□□□ 0.74
PTPN21-201ENST00000328736 RTN4Q9NQC3 1192 aaKnown RBP19.63■□□□□ 0.73
PTPN21-201ENST00000328736 ABCC8Q09428 1581 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms