RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 PLCB2Q00722 1185 aa18.09■□□□□ 0.49
PCM1-202ENST00000327578 PLPPR3Q6T4P5 718 aa18.07■□□□□ 0.48
PCM1-202ENST00000327578 PPM1GO15355 546 aaPredicted RBP18.06■□□□□ 0.48
PCM1-202ENST00000327578 ESF1Q9H501 851 aaKnown RBP18.05■□□□□ 0.48
PCM1-202ENST00000327578 CASC1Q6TDU7 716 aa18.05■□□□□ 0.48
PCM1-202ENST00000327578 HIRIP3Q9BW71 556 aaPredicted RBP18.01■□□□□ 0.47
PCM1-202ENST00000327578 NOP58Q9Y2X3 529 aaKnown RBP18.01■□□□□ 0.47
PCM1-202ENST00000327578 GOLGA6L6A8MZA4 724 aa18■□□□□ 0.47
PCM1-202ENST00000327578 KDM2AQ9Y2K7 1162 aa17.99■□□□□ 0.47
PCM1-202ENST00000327578 A0A0G2JS52 829 aa17.99■□□□□ 0.47
PCM1-202ENST00000327578 ARID4BQ4LE39 1312 aaPredicted RBP17.97■□□□□ 0.47
PCM1-202ENST00000327578 CHAF1AQ13111 956 aaPredicted RBP17.97■□□□□ 0.47
PCM1-202ENST00000327578 TAOK2Q9UL54 1235 aa17.96■□□□□ 0.47
PCM1-202ENST00000327578 MSNP26038 577 aaKnown RBP17.96■□□□□ 0.47
PCM1-202ENST00000327578 SUPT16HQ9Y5B9 1047 aaKnown RBP17.95■□□□□ 0.46
PCM1-202ENST00000327578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.461e-7■■□□□ 13.6
PCM1-202ENST00000327578 HSP90AB1P08238 724 aaKnown RBP17.95■□□□□ 0.46
PCM1-202ENST00000327578 SENP3-EIF4A1A0A087X0R7 540 aa17.91■□□□□ 0.46
PCM1-202ENST00000327578 DEKP35659 375 aaKnown RBP17.91■□□□□ 0.46
PCM1-202ENST00000327578 FTSJ3Q8IY81 847 aaKnown RBP17.91■□□□□ 0.46
PCM1-202ENST00000327578 DCAF1Q9Y4B6 1507 aa17.91■□□□□ 0.46
PCM1-202ENST00000327578 ZBTB7CA1YPR0 619 aa17.89■□□□□ 0.45
PCM1-202ENST00000327578 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.88■□□□□ 0.45
PCM1-202ENST00000327578 CHIC2Q9UKJ5 165 aa17.87■□□□□ 0.45
PCM1-202ENST00000327578 ARID3AQ99856 593 aa17.87■□□□□ 0.45
PCM1-202ENST00000327578 NRDCO43847 1150 aa17.86■□□□□ 0.45
PCM1-202ENST00000327578 PLEKHG5O94827 1062 aa17.86■□□□□ 0.45
PCM1-202ENST00000327578 DRC7Q8IY82 874 aa17.86■□□□□ 0.45
PCM1-202ENST00000327578 PABPN1Q86U42 306 aaKnown RBP eCLIP17.84■□□□□ 0.45
PCM1-202ENST00000327578 L1TD1Q5T7N2 865 aaKnown RBP17.83■□□□□ 0.45
PCM1-202ENST00000327578 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.44
PCM1-202ENST00000327578 RGS3P49796 1198 aa17.82■□□□□ 0.44
PCM1-202ENST00000327578 EIF4G2P78344 907 aaKnown RBP eCLIP17.8■□□□□ 0.44
PCM1-202ENST00000327578 SENP3Q9H4L4 574 aaPredicted RBP17.79■□□□□ 0.44
PCM1-202ENST00000327578 NAP1L2Q9ULW6 460 aaPredicted RBP17.79■□□□□ 0.44
PCM1-202ENST00000327578 NCBP3Q53F19 620 aaKnown RBP17.79■□□□□ 0.44
PCM1-202ENST00000327578 C14orf37Q86TY3 774 aa17.78■□□□□ 0.44
PCM1-202ENST00000327578 SPRYD3Q8NCJ5 442 aa17.77■□□□□ 0.44
PCM1-202ENST00000327578 TNNT3P45378 269 aaPredicted RBP17.77■□□□□ 0.44
PCM1-202ENST00000327578 PPP4R2Q9NY27 417 aa17.77■□□□□ 0.43
PCM1-202ENST00000327578 FGD1P98174 961 aa17.76■□□□□ 0.43
PCM1-202ENST00000327578 HSCBQ8IWL3 235 aa17.75■□□□□ 0.43
PCM1-202ENST00000327578 GOLGA6L4A6NEF3 574 aa17.74■□□□□ 0.43
PCM1-202ENST00000327578 B4GALNT3Q6L9W6 998 aa17.72■□□□□ 0.43
PCM1-202ENST00000327578 KCNJ4P48050 445 aa17.71■□□□□ 0.43
PCM1-202ENST00000327578 CCDC180Q9P1Z9 1646 aa17.7■□□□□ 0.42
PCM1-202ENST00000327578 FRAT1Q92837 279 aaPredicted RBP17.69■□□□□ 0.42
PCM1-202ENST00000327578 CFAP53Q96M91 514 aa17.68■□□□□ 0.42
PCM1-202ENST00000327578 CLSTN1O94985 981 aa17.67■□□□□ 0.42
PCM1-202ENST00000327578 NEUROD2Q15784 382 aa17.67■□□□□ 0.42
PCM1-202ENST00000327578 NOC3LQ8WTT2 800 aaKnown RBP17.66■□□□□ 0.42
PCM1-202ENST00000327578 OS9Q13438 667 aaPredicted RBP17.66■□□□□ 0.42
PCM1-202ENST00000327578 KNSTRNQ9Y448 316 aa17.63■□□□□ 0.41
PCM1-202ENST00000327578 GZF1Q9H116 711 aaPredicted RBP17.63■□□□□ 0.41
PCM1-202ENST00000327578 KIAA2012Q0VF49 1180 aa17.63■□□□□ 0.41
PCM1-202ENST00000327578 PNNQ9H307 717 aaKnown RBP17.61■□□□□ 0.41
PCM1-202ENST00000327578 TSPY4P0CV99 314 aa17.59■□□□□ 0.41
PCM1-202ENST00000327578 TSPY10P0CW01 314 aa17.59■□□□□ 0.41
PCM1-202ENST00000327578 RBM19Q9Y4C8 960 aaKnown RBP17.59■□□□□ 0.41
PCM1-202ENST00000327578 MCCP23508 829 aa17.58■□□□□ 0.41
PCM1-202ENST00000327578 MAPK8IP3Q9UPT6 1336 aa17.58■□□□□ 0.4
PCM1-202ENST00000327578 RRP7BPQ9NSQ0 103 aa17.57■□□□□ 0.4
PCM1-202ENST00000327578 GOLGA6L1Q8N7Z2 621 aa17.56■□□□□ 0.4
PCM1-202ENST00000327578 MTUS2Q5JR59 1369 aa17.55■□□□□ 0.4
PCM1-202ENST00000327578 CHMP4BQ9H444 224 aaKnown RBP17.55■□□□□ 0.4
PCM1-202ENST00000327578 ABCC9O60706 1549 aa17.55■□□□□ 0.4
PCM1-202ENST00000327578 GOLGA2Q08379 1002 aa17.55■□□□□ 0.4
PCM1-202ENST00000327578 RGL3Q3MIN7 710 aa17.55■□□□□ 0.4
PCM1-202ENST00000327578 NPHP1O15259 732 aa17.54■□□□□ 0.4
PCM1-202ENST00000327578 NPM1P06748 294 aaKnown RBP eCLIP17.54■□□□□ 0.4
PCM1-202ENST00000327578 GNL2Q13823 731 aaKnown RBP17.54■□□□□ 0.4
PCM1-202ENST00000327578 PTMSP20962 102 aa17.54■□□□□ 0.4
PCM1-202ENST00000327578 GBP4Q96PP9 640 aa17.52■□□□□ 0.4
PCM1-202ENST00000327578 A0A0U1RQG5 324 aaPredicted RBP17.52■□□□□ 0.4
PCM1-202ENST00000327578 MS4A1P11836 297 aa17.52■□□□□ 0.4
PCM1-202ENST00000327578 HAP1P54257 671 aaPredicted RBP17.52■□□□□ 0.39
PCM1-202ENST00000327578 PPP1R15AO75807 674 aaPredicted RBP17.51■□□□□ 0.39
PCM1-202ENST00000327578 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
PCM1-202ENST00000327578 CDCA8Q53HL2 280 aa17.5■□□□□ 0.39
PCM1-202ENST00000327578 HSP90AA2PQ14568 343 aaPredicted RBP17.48■□□□□ 0.39
PCM1-202ENST00000327578 NUDCQ9Y266 331 aa17.46■□□□□ 0.39
PCM1-202ENST00000327578 SETQ01105 290 aaPredicted RBP17.46■□□□□ 0.38
PCM1-202ENST00000327578 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
PCM1-202ENST00000327578 CARD11Q9BXL7 1154 aa17.45■□□□□ 0.38
PCM1-202ENST00000327578 GOLGA6L3A6NEY3 463 aa17.45■□□□□ 0.38
PCM1-202ENST00000327578 SYAP1Q96A49 352 aaPredicted RBP17.44■□□□□ 0.38
PCM1-202ENST00000327578 SLKQ9H2G2 1235 aaPredicted RBP17.44■□□□□ 0.38
PCM1-202ENST00000327578 PRM3Q9NNZ6 103 aa17.44■□□□□ 0.38
PCM1-202ENST00000327578 U2SURPO15042 1029 aaKnown RBP17.43■□□□□ 0.38
PCM1-202ENST00000327578 TPM4P67936 248 aa17.43■□□□□ 0.38
PCM1-202ENST00000327578 CFAP44Q96MT7 982 aa17.42■□□□□ 0.38
PCM1-202ENST00000327578 ISY1Q9ULR0 285 aaKnown RBP17.42■□□□□ 0.38
PCM1-202ENST00000327578 PDE4CQ08493 712 aa17.41■□□□□ 0.38
PCM1-202ENST00000327578 KIAA1211Q6ZU35 1233 aa17.4■□□□□ 0.38
PCM1-202ENST00000327578 APBB1O00213 710 aa17.36■□□□□ 0.37
PCM1-202ENST00000327578 CALRP27797 417 aaKnown RBP17.36■□□□□ 0.37
PCM1-202ENST00000327578 VSIG10Q8N0Z9 540 aa17.36■□□□□ 0.37
PCM1-202ENST00000327578 USP35Q9P2H5 1018 aa17.36■□□□□ 0.37
PCM1-202ENST00000327578 HSP90B1P14625 803 aaKnown RBP17.34■□□□□ 0.37
PCM1-202ENST00000327578 HTATSF1O43719 755 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms