RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
SFXN1-201ENST00000321442 CARMIL1Q5VZK9 1371 aa22.61■■□□□ 1.21
SFXN1-201ENST00000321442 TONSLQ96HA7 1378 aa22.59■■□□□ 1.21
SFXN1-201ENST00000321442 NPM2Q86SE8 214 aaKnown RBP22.59■■□□□ 1.21
SFXN1-201ENST00000321442 KANK4Q5T7N3 995 aaPredicted RBP22.58■■□□□ 1.21
SFXN1-201ENST00000321442 ANP32EQ9BTT0 268 aa22.58■■□□□ 1.21
SFXN1-201ENST00000321442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.56■■□□□ 1.27e-7■□□□□ 11.1
SFXN1-201ENST00000321442 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
SFXN1-201ENST00000321442 SENP3Q9H4L4 574 aaPredicted RBP22.55■■□□□ 1.2
SFXN1-201ENST00000321442 NBR1Q14596 966 aa22.54■■□□□ 1.2
SFXN1-201ENST00000321442 PLPPR3Q6T4P5 718 aa22.52■■□□□ 1.2
SFXN1-201ENST00000321442 ANP32AP39687 249 aaKnown RBP22.51■■□□□ 1.19
SFXN1-201ENST00000321442 SALL2Q9Y467 1007 aaPredicted RBP22.45■■□□□ 1.18
SFXN1-201ENST00000321442 SENP3-EIF4A1A0A087X0R7 540 aa22.44■■□□□ 1.18
SFXN1-201ENST00000321442 SIN3AQ96ST3 1273 aa22.43■■□□□ 1.18
SFXN1-201ENST00000321442 RAPGEF2Q9Y4G8 1499 aa22.43■■□□□ 1.18
SFXN1-201ENST00000321442 EIF4G1Q04637 1599 aaKnown RBP22.42■■□□□ 1.18
SFXN1-201ENST00000321442 MRS2Q9HD23 443 aa22.39■■□□□ 1.17
SFXN1-201ENST00000321442 NPM1P06748 294 aaKnown RBP eCLIP22.38■■□□□ 1.17
SFXN1-201ENST00000321442 CHGAP10645 457 aaKnown RBP22.37■■□□□ 1.17
SFXN1-201ENST00000321442 KDM2AQ9Y2K7 1162 aa22.37■■□□□ 1.17
SFXN1-201ENST00000321442 CCDC136Q96JN2 1154 aa22.36■■□□□ 1.17
SFXN1-201ENST00000321442 PDS5BQ9NTI5 1447 aa22.34■■□□□ 1.17
SFXN1-201ENST00000321442 PLEKHD1A6NEE1 506 aa22.34■■□□□ 1.17
SFXN1-201ENST00000321442 TSPY4P0CV99 314 aa22.33■■□□□ 1.16
SFXN1-201ENST00000321442 TSPY10P0CW01 314 aa22.33■■□□□ 1.16
SFXN1-201ENST00000321442 CFDP1Q9UEE9 299 aaPredicted RBP22.29■■□□□ 1.16
SFXN1-201ENST00000321442 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
SFXN1-201ENST00000321442 NESP48681 1621 aa22.28■■□□□ 1.16
SFXN1-201ENST00000321442 TSHZ2Q9NRE2 1034 aa22.27■■□□□ 1.16
SFXN1-201ENST00000321442 RAD54L2Q9Y4B4 1467 aa22.26■■□□□ 1.15
SFXN1-201ENST00000321442 ZBTB47Q9UFB7 747 aaPredicted RBP22.25■■□□□ 1.15
SFXN1-201ENST00000321442 EIF5BO60841 1220 aaKnown RBP22.24■■□□□ 1.15
SFXN1-201ENST00000321442 VPS8Q8N3P4 1428 aa22.23■■□□□ 1.15
SFXN1-201ENST00000321442 RBM19Q9Y4C8 960 aaKnown RBP22.22■■□□□ 1.15
SFXN1-201ENST00000321442 BICRAQ9NZM4 1560 aa22.22■■□□□ 1.15
SFXN1-201ENST00000321442 FHOD3Q2V2M9 1422 aa22.22■■□□□ 1.15
SFXN1-201ENST00000321442 RGL3Q3MIN7 710 aa22.21■■□□□ 1.15
SFXN1-201ENST00000321442 TMC1Q8TDI8 760 aa22.2■■□□□ 1.15
SFXN1-201ENST00000321442 BCL11AQ9H165 835 aa22.2■■□□□ 1.15
SFXN1-201ENST00000321442 NCAPD3P42695 1498 aa22.2■■□□□ 1.14
SFXN1-201ENST00000321442 EIF4G2P78344 907 aaKnown RBP eCLIP22.17■■□□□ 1.14
SFXN1-201ENST00000321442 FOXD1Q16676 465 aa22.16■■□□□ 1.14
SFXN1-201ENST00000321442 CCNB3Q8WWL7 1395 aa22.15■■□□□ 1.14
SFXN1-201ENST00000321442 B4GALNT3Q6L9W6 998 aa22.12■■□□□ 1.13
SFXN1-201ENST00000321442 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
SFXN1-201ENST00000321442 IGF1RP08069 1367 aa22.11■■□□□ 1.13
SFXN1-201ENST00000321442 CANXP27824 592 aaKnown RBP22.08■■□□□ 1.13
SFXN1-201ENST00000321442 FHAD1B1AJZ9 1412 aa22.04■■□□□ 1.12
SFXN1-201ENST00000321442 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
SFXN1-201ENST00000321442 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.126e-7■■■■□ 22.6
SFXN1-201ENST00000321442 CC2D2AQ9P2K1 1620 aa22.03■■□□□ 1.12
SFXN1-201ENST00000321442 JPH4Q96JJ6 628 aa22.03■■□□□ 1.12
SFXN1-201ENST00000321442 STAG3Q9UJ98 1225 aa22.01■■□□□ 1.11
SFXN1-201ENST00000321442 PPP4R2Q9NY27 417 aa22■■□□□ 1.11
SFXN1-201ENST00000321442 ESF1Q9H501 851 aaKnown RBP21.98■■□□□ 1.11
SFXN1-201ENST00000321442 ARXQ96QS3 562 aa21.96■■□□□ 1.11
SFXN1-201ENST00000321442 RTN4Q9NQC3 1192 aaKnown RBP21.95■■□□□ 1.1
SFXN1-201ENST00000321442 CFTRP13569 1480 aa21.93■■□□□ 1.1
SFXN1-201ENST00000321442 UNC13AQ9UPW8 1703 aa21.91■■□□□ 1.1
SFXN1-201ENST00000321442 CCER2I3L3R5 266 aa21.89■■□□□ 1.09
SFXN1-201ENST00000321442 LAS1LQ9Y4W2 734 aaKnown RBP21.89■■□□□ 1.09
SFXN1-201ENST00000321442 RAB3GAP2Q9H2M9 1393 aa21.89■■□□□ 1.09
SFXN1-201ENST00000321442 NOP58Q9Y2X3 529 aaKnown RBP21.88■■□□□ 1.09
SFXN1-201ENST00000321442 GAPVD1Q14C86 1478 aa21.87■■□□□ 1.09
SFXN1-201ENST00000321442 HNRNPMP52272 730 aaKnown RBP eCLIP21.86■■□□□ 1.09
SFXN1-201ENST00000321442 DEKP35659 375 aaKnown RBP21.86■■□□□ 1.09
SFXN1-201ENST00000321442 DHX57Q6P158 1386 aaKnown RBP21.85■■□□□ 1.09
SFXN1-201ENST00000321442 ARHGAP35Q9NRY4 1499 aa21.83■■□□□ 1.08
SFXN1-201ENST00000321442 CUX1P39880 1505 aa21.82■■□□□ 1.08
SFXN1-201ENST00000321442 PLEKHG5O94827 1062 aa21.82■■□□□ 1.08
SFXN1-201ENST00000321442 MLECQ14165 292 aa21.82■■□□□ 1.08
SFXN1-201ENST00000321442 FMN1Q68DA7 1419 aa21.81■■□□□ 1.08
SFXN1-201ENST00000321442 SETD5Q9C0A6 1442 aa21.81■■□□□ 1.08
SFXN1-201ENST00000321442 PPP1R15AO75807 674 aaPredicted RBP21.79■■□□□ 1.08
SFXN1-201ENST00000321442 ZNF644Q9H582 1327 aaPredicted RBP21.78■■□□□ 1.08
SFXN1-201ENST00000321442 HSPA5P11021 654 aaKnown RBP21.78■■□□□ 1.08
SFXN1-201ENST00000321442 CARMIL2Q6F5E8 1435 aa21.77■■□□□ 1.07
SFXN1-201ENST00000321442 TIMELESSQ9UNS1 1208 aa21.76■■□□□ 1.07
SFXN1-201ENST00000321442 ARID4BQ4LE39 1312 aaPredicted RBP21.76■■□□□ 1.07
SFXN1-201ENST00000321442 NEFMP07197 916 aa21.76■■□□□ 1.07
SFXN1-201ENST00000321442 PKD2Q13563 968 aa21.75■■□□□ 1.07
SFXN1-201ENST00000321442 GGT6Q6P531 493 aa21.75■■□□□ 1.07
SFXN1-201ENST00000321442 DCAF11Q8TEB1 546 aa21.74■■□□□ 1.07
SFXN1-201ENST00000321442 SLC24A1O60721 1099 aa21.73■■□□□ 1.07
SFXN1-201ENST00000321442 ARAP1Q96P48 1450 aa21.73■■□□□ 1.07
SFXN1-201ENST00000321442 WDR43Q15061 677 aaKnown RBP eCLIP21.72■■□□□ 1.07
SFXN1-201ENST00000321442 CARD11Q9BXL7 1154 aa21.72■■□□□ 1.07
SFXN1-201ENST00000321442 CYB5RLQ6IPT4 315 aa21.7■■□□□ 1.06
SFXN1-201ENST00000321442 POLA1P09884 1462 aaPredicted RBP21.7■■□□□ 1.06
SFXN1-201ENST00000321442 UPF2Q9HAU5 1272 aaKnown RBP21.69■■□□□ 1.06
SFXN1-201ENST00000321442 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
SFXN1-201ENST00000321442 MPHOSPH9Q99550 1183 aa21.69■■□□□ 1.06
SFXN1-201ENST00000321442 KIF21BO75037 1637 aa21.68■■□□□ 1.06
SFXN1-201ENST00000321442 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
SFXN1-201ENST00000321442 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
SFXN1-201ENST00000321442 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.66■■□□□ 1.06
SFXN1-201ENST00000321442 HSP90AA1P07900 732 aaKnown RBP21.65■■□□□ 1.06
SFXN1-201ENST00000321442 PHLDB1Q86UU1 1377 aa21.64■■□□□ 1.05
SFXN1-201ENST00000321442 RGS3P49796 1198 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms