RNA–Protein interactions for RNA: ENST00000320370.11

SSFA2-201, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSFA2, Length 4,965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-201ENST00000320370 MROH2BQ7Z745 1585 aa22.45■■□□□ 1.18
SSFA2-201ENST00000320370 RRP7BPQ9NSQ0 103 aa22.41■■□□□ 1.18
SSFA2-201ENST00000320370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.39■■□□□ 1.181e-6■■■□□ 15.9
SSFA2-201ENST00000320370 SALL2Q9Y467 1007 aaPredicted RBP22.37■■□□□ 1.17
SSFA2-201ENST00000320370 ESF1Q9H501 851 aaKnown RBP22.35■■□□□ 1.17
SSFA2-201ENST00000320370 CCNB3Q8WWL7 1395 aa22.34■■□□□ 1.17
SSFA2-201ENST00000320370 VPS8Q8N3P4 1428 aa22.33■■□□□ 1.16
SSFA2-201ENST00000320370 CCDC88BA6NC98 1476 aa22.32■■□□□ 1.16
SSFA2-201ENST00000320370 IRX6P78412 446 aaPredicted RBP22.31■■□□□ 1.16
SSFA2-201ENST00000320370 KDM2AQ9Y2K7 1162 aa22.31■■□□□ 1.16
SSFA2-201ENST00000320370 STAG3Q9UJ98 1225 aa22.31■■□□□ 1.16
SSFA2-201ENST00000320370 PLEKHD1A6NEE1 506 aa22.3■■□□□ 1.16
SSFA2-201ENST00000320370 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.3■■□□□ 1.16
SSFA2-201ENST00000320370 SMARCA2P51531 1590 aa22.28■■□□□ 1.16
SSFA2-201ENST00000320370 FHAD1B1AJZ9 1412 aa22.26■■□□□ 1.15
SSFA2-201ENST00000320370 ABCC8Q09428 1581 aa22.26■■□□□ 1.15
SSFA2-201ENST00000320370 WDR43Q15061 677 aaKnown RBP eCLIP22.25■■□□□ 1.15
SSFA2-201ENST00000320370 SIN3AQ96ST3 1273 aa22.24■■□□□ 1.15
SSFA2-201ENST00000320370 UPF2Q9HAU5 1272 aaKnown RBP22.24■■□□□ 1.15
SSFA2-201ENST00000320370 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
SSFA2-201ENST00000320370 CUX2O14529 1486 aa22.22■■□□□ 1.15
SSFA2-201ENST00000320370 CARMIL1Q5VZK9 1371 aa22.22■■□□□ 1.15
SSFA2-201ENST00000320370 CFDP1Q9UEE9 299 aaPredicted RBP22.17■■□□□ 1.14
SSFA2-201ENST00000320370 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
SSFA2-201ENST00000320370 SUPT16HQ9Y5B9 1047 aaKnown RBP22.16■■□□□ 1.14
SSFA2-201ENST00000320370 PLPPR3Q6T4P5 718 aa22.16■■□□□ 1.14
SSFA2-201ENST00000320370 NBR1Q14596 966 aa22.15■■□□□ 1.14
SSFA2-201ENST00000320370 ERCC6Q03468 1493 aa22.14■■□□□ 1.14
SSFA2-201ENST00000320370 KCNH8Q96L42 1107 aa22.12■■□□□ 1.13
SSFA2-201ENST00000320370 SETD5Q9C0A6 1442 aa22.11■■□□□ 1.13
SSFA2-201ENST00000320370 WIZO95785 1651 aa22.1■■□□□ 1.13
SSFA2-201ENST00000320370 ANP32EQ9BTT0 268 aa22.1■■□□□ 1.13
SSFA2-201ENST00000320370 CCER2I3L3R5 266 aa22.07■■□□□ 1.12
SSFA2-201ENST00000320370 HSP90AA1P07900 732 aaKnown RBP22.07■■□□□ 1.12
SSFA2-201ENST00000320370 KANK4Q5T7N3 995 aaPredicted RBP22.06■■□□□ 1.12
SSFA2-201ENST00000320370 PPP4R2Q9NY27 417 aa22.05■■□□□ 1.12
SSFA2-201ENST00000320370 CARD11Q9BXL7 1154 aa22.03■■□□□ 1.12
SSFA2-201ENST00000320370 ANP32BQ92688 251 aaKnown RBP22.01■■□□□ 1.11
SSFA2-201ENST00000320370 RGL3Q3MIN7 710 aa22.01■■□□□ 1.11
SSFA2-201ENST00000320370 ARHGAP35Q9NRY4 1499 aa22■■□□□ 1.11
SSFA2-201ENST00000320370 PDS5BQ9NTI5 1447 aa21.99■■□□□ 1.11
SSFA2-201ENST00000320370 DDRGK1Q96HY6 314 aa21.98■■□□□ 1.11
SSFA2-201ENST00000320370 CDCA8Q53HL2 280 aa21.97■■□□□ 1.11
SSFA2-201ENST00000320370 EIF4G1Q04637 1599 aaKnown RBP21.96■■□□□ 1.11
SSFA2-201ENST00000320370 RAB3GAP2Q9H2M9 1393 aa21.95■■□□□ 1.1
SSFA2-201ENST00000320370 SENP3Q9H4L4 574 aaPredicted RBP21.95■■□□□ 1.1
SSFA2-201ENST00000320370 ATAD2BQ9ULI0 1458 aa21.93■■□□□ 1.1
SSFA2-201ENST00000320370 SMARCA4P51532 1647 aa21.92■■□□□ 1.1
SSFA2-201ENST00000320370 SENP3-EIF4A1A0A087X0R7 540 aa21.92■■□□□ 1.1
SSFA2-201ENST00000320370 KNSTRNQ9Y448 316 aa21.91■■□□□ 1.1
SSFA2-201ENST00000320370 EIF5BO60841 1220 aaKnown RBP21.9■■□□□ 1.1
SSFA2-201ENST00000320370 CADPSQ9ULU8 1353 aa21.9■■□□□ 1.1
SSFA2-201ENST00000320370 HSPA5P11021 654 aaKnown RBP21.85■■□□□ 1.09
SSFA2-201ENST00000320370 BECN1Q14457 450 aa21.84■■□□□ 1.09
SSFA2-201ENST00000320370 FMN1Q68DA7 1419 aa21.84■■□□□ 1.09
SSFA2-201ENST00000320370 TDRD9Q8NDG6 1382 aaKnown RBP21.83■■□□□ 1.09
SSFA2-201ENST00000320370 RAPGEF2Q9Y4G8 1499 aa21.83■■□□□ 1.09
SSFA2-201ENST00000320370 PPP1R15AO75807 674 aaPredicted RBP21.8■■□□□ 1.08
SSFA2-201ENST00000320370 CFAP53Q96M91 514 aa21.8■■□□□ 1.08
SSFA2-201ENST00000320370 B4GALNT3Q6L9W6 998 aa21.79■■□□□ 1.08
SSFA2-201ENST00000320370 PPM1GO15355 546 aaPredicted RBP21.78■■□□□ 1.08
SSFA2-201ENST00000320370 ERICH6BQ5W0A0 696 aa21.78■■□□□ 1.08
SSFA2-201ENST00000320370 MYH16Q9H6N6 1097 aa21.78■■□□□ 1.08
SSFA2-201ENST00000320370 CARMIL2Q6F5E8 1435 aa21.77■■□□□ 1.08
SSFA2-201ENST00000320370 NOP58Q9Y2X3 529 aaKnown RBP21.76■■□□□ 1.07
SSFA2-201ENST00000320370 RUSC2Q8N2Y8 1516 aa21.75■■□□□ 1.07
SSFA2-201ENST00000320370 DHX57Q6P158 1386 aaKnown RBP21.75■■□□□ 1.07
SSFA2-201ENST00000320370 DCAF11Q8TEB1 546 aa21.74■■□□□ 1.07
SSFA2-201ENST00000320370 RBM19Q9Y4C8 960 aaKnown RBP21.73■■□□□ 1.07
SSFA2-201ENST00000320370 TMF1P82094 1093 aa21.7■■□□□ 1.07
SSFA2-201ENST00000320370 ARXQ96QS3 562 aa21.7■■□□□ 1.07
SSFA2-201ENST00000320370 MPHOSPH9Q99550 1183 aa21.7■■□□□ 1.06
SSFA2-201ENST00000320370 CC2D1BQ5T0F9 858 aaKnown RBP21.69■■□□□ 1.06
SSFA2-201ENST00000320370 PLEKHG5O94827 1062 aa21.67■■□□□ 1.06
SSFA2-201ENST00000320370 PKD2Q13563 968 aa21.66■■□□□ 1.06
SSFA2-201ENST00000320370 C14orf37Q86TY3 774 aa21.64■■□□□ 1.05
SSFA2-201ENST00000320370 FOXD1Q16676 465 aa21.63■■□□□ 1.05
SSFA2-201ENST00000320370 FHOD3Q2V2M9 1422 aa21.63■■□□□ 1.05
SSFA2-201ENST00000320370 GLIPR1L2Q4G1C9 344 aa21.63■■□□□ 1.05
SSFA2-201ENST00000320370 NEUROD2Q15784 382 aa21.62■■□□□ 1.05
SSFA2-201ENST00000320370 FTSJ3Q8IY81 847 aaKnown RBP21.62■■□□□ 1.05
SSFA2-201ENST00000320370 ZBTB7CA1YPR0 619 aa21.62■■□□□ 1.05
SSFA2-201ENST00000320370 KANK1Q14678 1352 aa21.61■■□□□ 1.05
SSFA2-201ENST00000320370 TSHZ2Q9NRE2 1034 aa21.61■■□□□ 1.05
SSFA2-201ENST00000320370 RGS3P49796 1198 aa21.6■■□□□ 1.05
SSFA2-201ENST00000320370 NUDCQ9Y266 331 aa21.59■■□□□ 1.05
SSFA2-201ENST00000320370 LAS1LQ9Y4W2 734 aaKnown RBP21.59■■□□□ 1.05
SSFA2-201ENST00000320370 FANCD2Q9BXW9 1451 aa21.58■■□□□ 1.05
SSFA2-201ENST00000320370 KTN1Q86UP2 1357 aaKnown RBP21.58■■□□□ 1.05
SSFA2-201ENST00000320370 ARID4BQ4LE39 1312 aaPredicted RBP21.57■■□□□ 1.04
SSFA2-201ENST00000320370 MAPK8IP3Q9UPT6 1336 aa21.57■■□□□ 1.04
SSFA2-201ENST00000320370 GOLGA6L22H0YM25 854 aa21.56■■□□□ 1.04
SSFA2-201ENST00000320370 RALBP1Q15311 655 aa21.56■■□□□ 1.04
SSFA2-201ENST00000320370 L3MBTL2Q969R5 705 aa21.56■■□□□ 1.04
SSFA2-201ENST00000320370 ANKRD30AQ9BXX3 1397 aa21.55■■□□□ 1.04
SSFA2-201ENST00000320370 MS4A1P11836 297 aa21.54■■□□□ 1.04
SSFA2-201ENST00000320370 FRAT1Q92837 279 aaPredicted RBP21.54■■□□□ 1.04
SSFA2-201ENST00000320370 TNNT2P45379 298 aaPredicted RBP21.54■■□□□ 1.04
SSFA2-201ENST00000320370 NUP155O75694 1391 aa21.52■■□□□ 1.03
SSFA2-201ENST00000320370 POGKQ9P215 609 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms