RNA–Protein interactions for RNA: ENST00000319584.11

ARID1B-201, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 2

Gene ARID1B, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-201ENST00000319584 MAP3K1Q13233 1512 aa18.84■□□□□ 0.61
ARID1B-201ENST00000319584 PCF11O94913 1555 aaKnown RBP18.84■□□□□ 0.61
ARID1B-201ENST00000319584 CLSPNQ9HAW4 1339 aa18.83■□□□□ 0.6
ARID1B-201ENST00000319584 MIER1Q8N108 512 aa18.83■□□□□ 0.6
ARID1B-201ENST00000319584 FHOD3Q2V2M9 1422 aa18.82■□□□□ 0.6
ARID1B-201ENST00000319584 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
ARID1B-201ENST00000319584 PHLDB1Q86UU1 1377 aa18.81■□□□□ 0.6
ARID1B-201ENST00000319584 ATP1B4Q9UN42 357 aaPredicted RBP18.8■□□□□ 0.6
ARID1B-201ENST00000319584 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
ARID1B-201ENST00000319584 CUL7Q14999 1698 aa18.79■□□□□ 0.6
ARID1B-201ENST00000319584 FHAD1B1AJZ9 1412 aa18.79■□□□□ 0.6
ARID1B-201ENST00000319584 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
ARID1B-201ENST00000319584 CTTNBP2Q8WZ74 1663 aa18.77■□□□□ 0.6
ARID1B-201ENST00000319584 CENPBP07199 599 aaPredicted RBP18.77■□□□□ 0.6
ARID1B-201ENST00000319584 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
ARID1B-201ENST00000319584 RAB3GAP2Q9H2M9 1393 aa18.75■□□□□ 0.59
ARID1B-201ENST00000319584 YTHDC1Q96MU7 727 aaKnown RBP18.75■□□□□ 0.59
ARID1B-201ENST00000319584 GTF3C3Q9Y5Q9 886 aa18.72■□□□□ 0.59
ARID1B-201ENST00000319584 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
ARID1B-201ENST00000319584 ABCA5Q8WWZ7 1642 aa18.72■□□□□ 0.59
ARID1B-201ENST00000319584 EFCAB5A4FU69 1503 aa18.71■□□□□ 0.59
ARID1B-201ENST00000319584 FAM50AQ14320 339 aaKnown RBP18.71■□□□□ 0.59
ARID1B-201ENST00000319584 FYCO1Q9BQS8 1478 aa18.7■□□□□ 0.58
ARID1B-201ENST00000319584 CASKIN1Q8WXD9 1431 aa18.69■□□□□ 0.58
ARID1B-201ENST00000319584 MAPKBP1O60336 1514 aa18.68■□□□□ 0.58
ARID1B-201ENST00000319584 GAPVD1Q14C86 1478 aa18.68■□□□□ 0.58
ARID1B-201ENST00000319584 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
ARID1B-201ENST00000319584 SETD5Q9C0A6 1442 aa18.66■□□□□ 0.58
ARID1B-201ENST00000319584 AQRO60306 1485 aaKnown RBP eCLIP18.64■□□□□ 0.573e-7■■■■■ 29.1
ARID1B-201ENST00000319584 SNAPC4Q5SXM2 1469 aa18.64■□□□□ 0.57
ARID1B-201ENST00000319584 LRRIQ1Q96JM4 1722 aa18.63■□□□□ 0.57
ARID1B-201ENST00000319584 SAMD9Q5K651 1589 aa18.61■□□□□ 0.57
ARID1B-201ENST00000319584 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
ARID1B-201ENST00000319584 FMN1Q68DA7 1419 aa18.6■□□□□ 0.57
ARID1B-201ENST00000319584 SIN3AQ96ST3 1273 aa18.56■□□□□ 0.56
ARID1B-201ENST00000319584 FGD6Q6ZV73 1430 aa18.53■□□□□ 0.56
ARID1B-201ENST00000319584 GRIN2BQ13224 1484 aa18.52■□□□□ 0.56
ARID1B-201ENST00000319584 MTUS2Q5JR59 1369 aa18.52■□□□□ 0.56
ARID1B-201ENST00000319584 PBRM1Q86U86 1689 aa18.51■□□□□ 0.55
ARID1B-201ENST00000319584 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.5■□□□□ 0.552e-6■■■■■ 36.9
ARID1B-201ENST00000319584 PTPRKQ15262 1439 aa18.48■□□□□ 0.55
ARID1B-201ENST00000319584 NCOA2Q15596 1464 aa18.46■□□□□ 0.55
ARID1B-201ENST00000319584 MAGI3Q5TCQ9 1506 aa18.45■□□□□ 0.54
ARID1B-201ENST00000319584 PELP1Q8IZL8 1130 aaKnown RBP18.44■□□□□ 0.54
ARID1B-201ENST00000319584 SUPT6HQ7KZ85 1726 aaKnown RBP18.42■□□□□ 0.54
ARID1B-201ENST00000319584 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
ARID1B-201ENST00000319584 THOC2Q8NI27 1593 aaKnown RBP18.42■□□□□ 0.54
ARID1B-201ENST00000319584 MYOM3Q5VTT5 1437 aa18.42■□□□□ 0.54
ARID1B-201ENST00000319584 MRC2Q9UBG0 1479 aa18.41■□□□□ 0.54
ARID1B-201ENST00000319584 IQGAP2Q13576 1575 aa18.4■□□□□ 0.54
ARID1B-201ENST00000319584 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.54
ARID1B-201ENST00000319584 EHBP1L1Q8N3D4 1523 aa18.39■□□□□ 0.53
ARID1B-201ENST00000319584 ZNF608Q9ULD9 1512 aaPredicted RBP18.38■□□□□ 0.53
ARID1B-201ENST00000319584 PTPN23Q9H3S7 1636 aa18.38■□□□□ 0.53
ARID1B-201ENST00000319584 HFM1A2PYH4 1435 aa18.37■□□□□ 0.53
ARID1B-201ENST00000319584 UGGT2Q9NYU1 1516 aa18.37■□□□□ 0.53
ARID1B-201ENST00000319584 ARID3CA6NKF2 412 aa18.36■□□□□ 0.53
ARID1B-201ENST00000319584 ARHGEF11O15085 1522 aa18.36■□□□□ 0.53
ARID1B-201ENST00000319584 NAIPQ13075 1403 aa18.35■□□□□ 0.53
ARID1B-201ENST00000319584 CDK13Q14004 1512 aaKnown RBP18.34■□□□□ 0.53
ARID1B-201ENST00000319584 HIRIP3Q9BW71 556 aaPredicted RBP18.34■□□□□ 0.53
ARID1B-201ENST00000319584 KCNH8Q96L42 1107 aa18.33■□□□□ 0.52
ARID1B-201ENST00000319584 HECW1Q76N89 1606 aa18.33■□□□□ 0.52
ARID1B-201ENST00000319584 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.52
ARID1B-201ENST00000319584 PPP1R15AO75807 674 aaPredicted RBP18.32■□□□□ 0.52
ARID1B-201ENST00000319584 UACAQ9BZF9 1416 aa18.31■□□□□ 0.52
ARID1B-201ENST00000319584 TIMELESSQ9UNS1 1208 aa18.3■□□□□ 0.52
ARID1B-201ENST00000319584 DDX10Q13206 875 aaKnown RBP18.3■□□□□ 0.52
ARID1B-201ENST00000319584 CHIC2Q9UKJ5 165 aa18.3■□□□□ 0.52
ARID1B-201ENST00000319584 WDR62O43379 1518 aa18.29■□□□□ 0.52
ARID1B-201ENST00000319584 RRP7BPQ9NSQ0 103 aa18.28■□□□□ 0.52
ARID1B-201ENST00000319584 IFT140Q96RY7 1462 aa18.28■□□□□ 0.52
ARID1B-201ENST00000319584 TCOF1Q13428 1488 aaKnown RBP18.25■□□□□ 0.51
ARID1B-201ENST00000319584 KDM6BO15054 1643 aa18.24■□□□□ 0.51
ARID1B-201ENST00000319584 TONSLQ96HA7 1378 aa18.24■□□□□ 0.51
ARID1B-201ENST00000319584 DISP1Q96F81 1524 aa18.23■□□□□ 0.51
ARID1B-201ENST00000319584 EIF4G3O43432 1585 aaKnown RBP18.23■□□□□ 0.51
ARID1B-201ENST00000319584 MYT1Q01538 1121 aa18.23■□□□□ 0.51
ARID1B-201ENST00000319584 KIAA0556O60303 1618 aa18.21■□□□□ 0.51
ARID1B-201ENST00000319584 KIAA0586Q9BVV6 1533 aa18.21■□□□□ 0.51
ARID1B-201ENST00000319584 GCC2Q8IWJ2 1684 aa18.21■□□□□ 0.5
ARID1B-201ENST00000319584 DENND4BO75064 1496 aaPredicted RBP18.2■□□□□ 0.5
ARID1B-201ENST00000319584 KDM5BQ9UGL1 1544 aa18.19■□□□□ 0.5
ARID1B-201ENST00000319584 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
ARID1B-201ENST00000319584 NUP153P49790 1475 aaKnown RBP18.17■□□□□ 0.5
ARID1B-201ENST00000319584 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
ARID1B-201ENST00000319584 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
ARID1B-201ENST00000319584 ERCC6Q03468 1493 aa18.14■□□□□ 0.49
ARID1B-201ENST00000319584 ZNF644Q9H582 1327 aaPredicted RBP18.14■□□□□ 0.49
ARID1B-201ENST00000319584 RAPGEF6Q8TEU7 1601 aa18.13■□□□□ 0.49
ARID1B-201ENST00000319584 AKNAQ7Z591 1439 aa18.11■□□□□ 0.49
ARID1B-201ENST00000319584 FOXD1Q16676 465 aa18.11■□□□□ 0.49
ARID1B-201ENST00000319584 CEP170Q5SW79 1584 aa18.1■□□□□ 0.49
ARID1B-201ENST00000319584 SUPT16HQ9Y5B9 1047 aaKnown RBP18.09■□□□□ 0.49
ARID1B-201ENST00000319584 DAPK1P53355 1430 aa18.08■□□□□ 0.48
ARID1B-201ENST00000319584 FBLN2P98095 1184 aa18.08■□□□□ 0.48
ARID1B-201ENST00000319584 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
ARID1B-201ENST00000319584 MPHOSPH9Q99550 1183 aa18.08■□□□□ 0.48
ARID1B-201ENST00000319584 PLB1Q6P1J6 1458 aa18.06■□□□□ 0.48
ARID1B-201ENST00000319584 ABCC5O15440 1437 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms