RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 ANP32BQ92688 251 aaKnown RBP19.13■□□□□ 0.65
TRIM25-201ENST00000316881 MIER1Q8N108 512 aa19.11■□□□□ 0.65
TRIM25-201ENST00000316881 CLIP1P30622 1438 aa19.11■□□□□ 0.65
TRIM25-201ENST00000316881 PLEKHG5O94827 1062 aa19.11■□□□□ 0.65
TRIM25-201ENST00000316881 CEP162Q5TB80 1403 aa19.08■□□□□ 0.64
TRIM25-201ENST00000316881 MYH16Q9H6N6 1097 aa19.07■□□□□ 0.64
TRIM25-201ENST00000316881 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
TRIM25-201ENST00000316881 RRP7BPQ9NSQ0 103 aa19.06■□□□□ 0.64
TRIM25-201ENST00000316881 SENP3Q9H4L4 574 aaPredicted RBP19.06■□□□□ 0.64
TRIM25-201ENST00000316881 GOLGA3Q08378 1498 aa19.02■□□□□ 0.64
TRIM25-201ENST00000316881 CFDP1Q9UEE9 299 aaPredicted RBP19.02■□□□□ 0.64
TRIM25-201ENST00000316881 MRS2Q9HD23 443 aa19.02■□□□□ 0.64
TRIM25-201ENST00000316881 EEA1Q15075 1411 aa19.01■□□□□ 0.63
TRIM25-201ENST00000316881 EIF4G2P78344 907 aaKnown RBP eCLIP19■□□□□ 0.637e-9■■■■■ 43.2
TRIM25-201ENST00000316881 CDCA8Q53HL2 280 aa18.99■□□□□ 0.63
TRIM25-201ENST00000316881 BAZ1BQ9UIG0 1483 aaKnown RBP18.99■□□□□ 0.63
TRIM25-201ENST00000316881 RGL3Q3MIN7 710 aa18.97■□□□□ 0.63
TRIM25-201ENST00000316881 CFAP53Q96M91 514 aa18.97■□□□□ 0.63
TRIM25-201ENST00000316881 CCDC136Q96JN2 1154 aa18.95■□□□□ 0.62
TRIM25-201ENST00000316881 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
TRIM25-201ENST00000316881 KIF27Q86VH2 1401 aa18.92■□□□□ 0.62
TRIM25-201ENST00000316881 NACADO15069 1562 aa18.91■□□□□ 0.62
TRIM25-201ENST00000316881 TNIKQ9UKE5 1360 aa18.91■□□□□ 0.62
TRIM25-201ENST00000316881 ARXQ96QS3 562 aa18.9■□□□□ 0.62
TRIM25-201ENST00000316881 HIRIP3Q9BW71 556 aaPredicted RBP18.9■□□□□ 0.62
TRIM25-201ENST00000316881 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.621e-7■■■■■ 66.8
TRIM25-201ENST00000316881 LMOD2Q6P5Q4 547 aa18.88■□□□□ 0.61
TRIM25-201ENST00000316881 POGKQ9P215 609 aa18.88■□□□□ 0.61
TRIM25-201ENST00000316881 CDK11BP21127 795 aaKnown RBP18.87■□□□□ 0.61
TRIM25-201ENST00000316881 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
TRIM25-201ENST00000316881 PPM1GO15355 546 aaPredicted RBP18.85■□□□□ 0.61
TRIM25-201ENST00000316881 HDGFP51858 240 aaKnown RBP18.84■□□□□ 0.61
TRIM25-201ENST00000316881 CEP164Q9UPV0 1460 aa18.82■□□□□ 0.6
TRIM25-201ENST00000316881 NUDCQ9Y266 331 aa18.79■□□□□ 0.6
TRIM25-201ENST00000316881 CARD11Q9BXL7 1154 aa18.79■□□□□ 0.6
TRIM25-201ENST00000316881 NPHP1O15259 732 aa18.78■□□□□ 0.6
TRIM25-201ENST00000316881 IRX6P78412 446 aaPredicted RBP18.78■□□□□ 0.6
TRIM25-201ENST00000316881 MAPK8IP3Q9UPT6 1336 aa18.76■□□□□ 0.59
TRIM25-201ENST00000316881 KANK1Q14678 1352 aa18.75■□□□□ 0.59
TRIM25-201ENST00000316881 CECR2Q9BXF3 1484 aa18.75■□□□□ 0.59
TRIM25-201ENST00000316881 CCNB3Q8WWL7 1395 aa18.73■□□□□ 0.59
TRIM25-201ENST00000316881 BAZ1AQ9NRL2 1556 aaPredicted RBP18.73■□□□□ 0.59
TRIM25-201ENST00000316881 MLECQ14165 292 aa18.72■□□□□ 0.59
TRIM25-201ENST00000316881 NCLP19338 710 aaKnown RBP18.68■□□□□ 0.58
TRIM25-201ENST00000316881 EIF5BO60841 1220 aaKnown RBP18.68■□□□□ 0.58
TRIM25-201ENST00000316881 FTSJ3Q8IY81 847 aaKnown RBP18.67■□□□□ 0.58
TRIM25-201ENST00000316881 CASC1Q6TDU7 716 aa18.67■□□□□ 0.58
TRIM25-201ENST00000316881 LAS1LQ9Y4W2 734 aaKnown RBP18.66■□□□□ 0.58
TRIM25-201ENST00000316881 SOGA1O94964 1423 aa18.66■□□□□ 0.58
TRIM25-201ENST00000316881 NBR1Q14596 966 aa18.66■□□□□ 0.58
TRIM25-201ENST00000316881 PNNQ9H307 717 aaKnown RBP18.65■□□□□ 0.58
TRIM25-201ENST00000316881 BECN1Q14457 450 aa18.64■□□□□ 0.57
TRIM25-201ENST00000316881 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
TRIM25-201ENST00000316881 NEUROD2Q15784 382 aa18.62■□□□□ 0.57
TRIM25-201ENST00000316881 CHMP4BQ9H444 224 aaKnown RBP18.62■□□□□ 0.57
TRIM25-201ENST00000316881 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
TRIM25-201ENST00000316881 SIN3AQ96ST3 1273 aa18.59■□□□□ 0.57
TRIM25-201ENST00000316881 CARMIL1Q5VZK9 1371 aa18.59■□□□□ 0.57
TRIM25-201ENST00000316881 ZRSR1Q15695 479 aaKnown RBP18.58■□□□□ 0.56
TRIM25-201ENST00000316881 GOLGA6L22H0YM25 854 aa18.58■□□□□ 0.56
TRIM25-201ENST00000316881 U2SURPO15042 1029 aaKnown RBP18.58■□□□□ 0.56
TRIM25-201ENST00000316881 TNNT2P45379 298 aaPredicted RBP18.57■□□□□ 0.56
TRIM25-201ENST00000316881 CARMIL2Q6F5E8 1435 aa18.57■□□□□ 0.56
TRIM25-201ENST00000316881 TMF1P82094 1093 aa18.56■□□□□ 0.56
TRIM25-201ENST00000316881 GGT6Q6P531 493 aa18.56■□□□□ 0.56
TRIM25-201ENST00000316881 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
TRIM25-201ENST00000316881 CUX2O14529 1486 aa18.55■□□□□ 0.56
TRIM25-201ENST00000316881 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
TRIM25-201ENST00000316881 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
TRIM25-201ENST00000316881 OS9Q13438 667 aaPredicted RBP18.55■□□□□ 0.56
TRIM25-201ENST00000316881 DDRGK1Q96HY6 314 aa18.55■□□□□ 0.56
TRIM25-201ENST00000316881 MS4A1P11836 297 aa18.54■□□□□ 0.56
TRIM25-201ENST00000316881 SUPT16HQ9Y5B9 1047 aaKnown RBP18.54■□□□□ 0.56
TRIM25-201ENST00000316881 PDS5BQ9NTI5 1447 aa18.53■□□□□ 0.56
TRIM25-201ENST00000316881 ABCC8Q09428 1581 aa18.53■□□□□ 0.56
TRIM25-201ENST00000316881 DCAF11Q8TEB1 546 aa18.52■□□□□ 0.56
TRIM25-201ENST00000316881 ANP32EQ9BTT0 268 aa18.51■□□□□ 0.55
TRIM25-201ENST00000316881 SOX12O15370 315 aa18.49■□□□□ 0.55
TRIM25-201ENST00000316881 CCDC88BA6NC98 1476 aa18.49■□□□□ 0.55
TRIM25-201ENST00000316881 CC2D1BQ5T0F9 858 aaKnown RBP18.48■□□□□ 0.55
TRIM25-201ENST00000316881 VPS8Q8N3P4 1428 aa18.47■□□□□ 0.55
TRIM25-201ENST00000316881 EFCAB2Q5VUJ9 269 aa18.47■□□□□ 0.55
TRIM25-201ENST00000316881 SENP3-EIF4A1A0A087X0R7 540 aa18.46■□□□□ 0.55
TRIM25-201ENST00000316881 FRAT1Q92837 279 aaPredicted RBP18.46■□□□□ 0.55
TRIM25-201ENST00000316881 FGD1P98174 961 aa18.45■□□□□ 0.54
TRIM25-201ENST00000316881 HDGFL2Q7Z4V5 671 aaPredicted RBP18.45■□□□□ 0.54
TRIM25-201ENST00000316881 SAFB2Q14151 953 aaKnown RBP eCLIP18.45■□□□□ 0.54
TRIM25-201ENST00000316881 TULP1O00294 542 aaPredicted RBP18.45■□□□□ 0.54
TRIM25-201ENST00000316881 MORC1Q86VD1 984 aa18.44■□□□□ 0.54
TRIM25-201ENST00000316881 RTF1Q92541 710 aaKnown RBP18.44■□□□□ 0.54
TRIM25-201ENST00000316881 STK26Q9P289 416 aa18.42■□□□□ 0.54
TRIM25-201ENST00000316881 KCNJ4P48050 445 aa18.42■□□□□ 0.54
TRIM25-201ENST00000316881 CSB-PGBD3P0DP91 1061 aa18.41■□□□□ 0.54
TRIM25-201ENST00000316881 PAK3O75914 559 aaPredicted RBP18.4■□□□□ 0.54
TRIM25-201ENST00000316881 KANK4Q5T7N3 995 aaPredicted RBP18.38■□□□□ 0.53
TRIM25-201ENST00000316881 PPP4R2Q9NY27 417 aa18.37■□□□□ 0.53
TRIM25-201ENST00000316881 TRIM44Q96DX7 344 aaPredicted RBP18.37■□□□□ 0.53
TRIM25-201ENST00000316881 EID1Q9Y6B2 187 aa18.37■□□□□ 0.53
TRIM25-201ENST00000316881 SETD5Q9C0A6 1442 aa18.36■□□□□ 0.53
TRIM25-201ENST00000316881 WIZO95785 1651 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms